CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d048079_P001	Maize	extracellular	81.16	75.54
Os03t0216800-01	Rice	extracellular	76.74	75.34
HORVU0Hr1G038940.1	Barley	cytosol	68.6	73.02
TraesCS4B01G244300.1	Wheat	extracellular	70.47	69.98
TraesCS4A01G066700.1	Wheat	extracellular	70.23	69.75
TraesCS4D01G243600.1	Wheat	extracellular	70.0	69.52
VIT_13s0064g00760.t01	Wine grape	cytosol	40.23	52.11
GSMUA_Achr1P22940_001	Banana	extracellular	51.63	50.34
KRH71979	Soybean	extracellular	46.74	46.96
KRH23942	Soybean	extracellular	47.44	46.36
Bra029690.1-P	Field mustard	cytosol	43.72	46.31
VIT_08s0007g08330.t01	Wine grape	extracellular	47.67	46.17
KRH32949	Soybean	extracellular	46.28	45.43
Solyc04g015530.1.1	Tomato	cytosol	41.4	45.41
KRH39858	Soybean	extracellular	46.28	45.12
CDY28005	Canola	extracellular	43.95	44.89
CDY35976	Canola	extracellular	43.95	44.89
KRH13966	Soybean	extracellular	45.58	44.65
Bra004655.1-P	Field mustard	extracellular	44.42	44.63
CDX79907	Canola	extracellular	45.12	44.6
CDX74019	Canola	extracellular	45.12	44.39
CDY48768	Canola	extracellular	44.88	44.37
VIT_08s0007g07750.t01	Wine grape	extracellular	45.58	44.34
Bra001279.1-P	Field mustard	extracellular	44.88	44.16
VIT_08s0007g07760.t01	Wine grape	extracellular	44.65	44.14
CDY14791	Canola	extracellular	44.42	44.11
Bra016911.1-P	Field mustard	extracellular	44.19	43.88
CDY07963	Canola	extracellular	44.65	43.84
VIT_08s0007g07770.t01	Wine grape	extracellular	44.88	43.67
CDY06902	Canola	extracellular	43.95	43.65
CDX72025	Canola	extracellular	43.72	43.52
Bra007332.1-P	Field mustard	extracellular	43.72	43.52
AT2G41850.1	Thale cress	extracellular	43.49	43.19
VIT_08s0007g07780.t01	Wine grape	extracellular	43.49	43.09
PGSC0003DMT400017691	Potato	extracellular	35.12	43.02
VIT_13s0064g00750.t01	Wine grape	cytosol	45.12	42.54
AT3G07970.1	Thale cress	extracellular	43.26	42.37
Bra003286.1-P	Field mustard	extracellular	42.56	42.26
CDX67693	Canola	extracellular	42.56	42.26
Solyc10g080210.1.1	Tomato	extracellular	44.65	42.01
KRH33163	Soybean	extracellular, plastid	46.51	41.93
EER93240	Sorghum	extracellular	43.72	41.59
Bra016912.1-P	Field mustard	extracellular, nucleus, peroxisome	43.26	41.52
EER90686	Sorghum	plastid	41.86	41.28
Solyc01g087280.1.1	Tomato	extracellular	40.7	41.18
KRH66955	Soybean	extracellular	44.42	41.16
AT3G57510.1	Thale cress	extracellular	40.7	40.6
PGSC0003DMT400070039	Potato	cytosol	37.67	39.51
EER90681	Sorghum	extracellular	42.33	38.97
EES18597	Sorghum	extracellular	36.74	38.73
KXG26899	Sorghum	extracellular	37.67	38.57
KRG95273	Soybean	extracellular	44.88	36.9
EES04449	Sorghum	extracellular	41.16	34.04
KXG32718	Sorghum	extracellular	32.56	32.11
CDY61868	Canola	extracellular	40.93	32.06
KXG31745	Sorghum	extracellular	30.0	29.93
KXG22449	Sorghum	extracellular, golgi	32.56	29.91
CDY06100	Canola	extracellular	29.53	29.74
EES00620	Sorghum	extracellular	34.65	29.45
KXG32428	Sorghum	mitochondrion	34.88	28.85
EES01142	Sorghum	extracellular	35.12	28.38
EES20001	Sorghum	extracellular	34.42	27.56
KXG32426	Sorghum	extracellular	34.88	21.68

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A1B6QPL0	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334
EnsemblPlants:KXG39856	ProteinID:KXG39856	ProteinID:KXG39856.1	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375
PANTHER:PTHR31375:SF95	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3001G454800
SUPFAM:SSF51126	SignalP:SignalP-noTM	UniParc:UPI00081ADDF5	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:73103804..73107571

Molecular Weight (calculated)

46880.9 Da

IEP (calculated)

5.883

GRAVY (calculated)

0.027

Length

430 amino acids

Sequence
(BLAST)

001: MGPARLPLAC IVTTLIFVYM LVHHGASSQE VFPEADGPAA ENSDELWLRS GPPPRVVDVD DYGAGDAGGD HVTEAFLEAW SEACNSSDDR SVFLVPEGKA
101: YLLMPVIFRG PCRAVSITAM IKGTLEAPSN RSVWLDQDLQ EWITFEGIDR LRVLGGGTLD GNGLQWWINS CKLNKSMRCV IGPTALYFRR CTHLVVEELE
201: VRDSMQMHVA IAYSWNVVVS KLLITAPGWS PNTDGIHVSN SREVSISKCT ISTGDDCISI VTGSMFVRVT SIFCGPGHGI SIGSLGANNS WAHVSDVLVE
301: KATLLGTTNG VRIKTWQGGH GYAERISFQD ISMHNVTNPI IIDQNYCDSK RPCHEQGSAV AVRNIRYRNI HGTSASKVAV NFICSGALHC DGILMQDIYL
401: VGEGRYATCS YTNATVVQFG YNFPFCSAEM

Best Arabidopsis Sequence Match ( AT3G07970.1 )
(BLAST)

001: MYEKIIILSV FLLTFLPSCF SSYPFNHRDD LFMSSNVYYE TNRQHQHGHN TRNSHLKNRH GYAPRSSPRS FNVNTFGAKA NGNDDSKAFM KAWEAACSST
101: GIVYIVAPKN RDYMLKAVTF SGPCKSSLII FKIYGRIEAW ENPSDYKERR HWIVFENVNN LRVEGGGRID GNGHIWWPKS CKINPQLPCL GAPTAVTFVE
201: CNNLRVSNIR LENAQQMHLT FQDCKNVKAL NLMVTSPADS PNTDGIHVSG TQNILIQDSI VRTGDDCISI VSGSENVRAT GITCGPGHGI SIGSLGEDNS
301: EAYVSNVVVN KATLIGTTNG VRIKTWQGGH GMAKNIIFQD IIMKNVTNPI IINQDYCDRV EACPEQKSAV QVSNVLYKNI QGTSSRPIAV KFVCSKNIPC
401: RGISMQNVKL VDQTQQDVSK ASCSNVKLDT RGNVSPLCT

Arabidopsis Description

QRT2Polygalacturonase QRT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB7]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.