CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0578600-01	Rice	cytosol, extracellular	53.45	91.99
TraesCS1A01G418000.1	Wheat	extracellular	73.56	77.45
TraesCS1B01G448100.1	Wheat	extracellular	75.79	76.79
TraesCS1D01G425600.1	Wheat	extracellular	74.49	75.9
Zm00001d009667_P001	Maize	extracellular, mitochondrion, plastid	70.76	73.64
HORVU1Hr1G091430.5	Barley	extracellular	75.42	73.1
EES01142	Sorghum	extracellular	71.88	72.56
GSMUA_Achr6P22080_001	Banana	extracellular	60.52	67.01
GSMUA_Achr5P09080_001	Banana	extracellular	60.52	66.74
GSMUA_Achr4P02960_001	Banana	extracellular	57.36	64.84
VIT_01s0127g00400.t01	Wine grape	extracellular, mitochondrion, plastid	59.03	61.2
GSMUA_Achr1P27280_001	Banana	extracellular	57.91	60.98
KRG93260	Soybean	extracellular	48.98	59.37
KRH45648	Soybean	nucleus	59.4	59.29
KRG99364	Soybean	extracellular, nucleus	58.85	58.74
Bra008748.1-P	Field mustard	extracellular	47.86	58.54
Bra031724.1-P	Field mustard	extracellular	56.05	58.45
CDX69569	Canola	extracellular	47.67	58.31
Solyc05g005170.2.1	Tomato	nucleus	55.12	58.27
CDY09873	Canola	extracellular	47.49	58.09
AT5G14650.1	Thale cress	extracellular	46.93	57.93
PGSC0003DMT400035162	Potato	extracellular	55.12	57.93
KRH56581	Soybean	extracellular	47.3	57.86
CDY37962	Canola	extracellular, golgi, vacuole	56.98	57.52
CDY54228	Canola	extracellular, golgi, vacuole	56.24	57.2
VIT_14s0066g01060.t01	Wine grape	extracellular	51.4	57.14
CDX93397	Canola	extracellular, golgi, vacuole	56.61	57.04
Bra019912.1-P	Field mustard	extracellular, golgi, vacuole	56.61	57.04
CDY50367	Canola	extracellular, golgi	56.61	56.72
CDY47212	Canola	extracellular	56.42	56.53
Bra018429.1-P	Field mustard	extracellular, golgi, vacuole	55.87	56.5
CDY20962	Canola	extracellular, golgi, vacuole	55.87	56.5
CDY20612	Canola	extracellular	55.68	56.31
CDY34877	Canola	extracellular, golgi	51.21	56.24
Bra027148.1-P	Field mustard	extracellular	56.05	56.16
AT1G60590.1	Thale cress	extracellular	56.05	55.74
AT1G10640.1	Thale cress	extracellular, golgi	55.12	55.64
Solyc07g015870.2.1	Tomato	extracellular	45.81	54.79
PGSC0003DMT400077010	Potato	cytosol	45.62	52.92
KXG32718	Sorghum	extracellular	35.01	43.12
EES00620	Sorghum	extracellular	36.31	38.54
EES18597	Sorghum	extracellular	28.49	37.5
EER90686	Sorghum	plastid	29.98	36.93
KXG26899	Sorghum	extracellular	27.56	35.24
KXG32428	Sorghum	mitochondrion	33.89	35.0
KXG39856	Sorghum	extracellular	27.56	34.42
EER93240	Sorghum	extracellular	28.86	34.29
EER90681	Sorghum	extracellular	29.8	34.26
EES04449	Sorghum	extracellular	31.28	32.31
KXG22449	Sorghum	extracellular, golgi	26.63	30.56
KXG31745	Sorghum	extracellular	24.02	29.93
KXG32426	Sorghum	extracellular	36.13	28.03

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.3	EntrezGene:8064720	UniProt:C5YWE0	EnsemblPlants:EES20001	ProteinID:EES20001
ProteinID:EES20001.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31375
PANTHER:PTHR31375:SF56	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3009G243500
SUPFAM:SSF51126	unigene:Sbi.39	SignalP:SignalP-noTM	UniParc:UPI0001A8934E	RefSeq:XP_002441571.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:57971301..57976036

Molecular Weight (calculated)

57413.8 Da

IEP (calculated)

7.570

GRAVY (calculated)

-0.222

Length

537 amino acids

Sequence
(BLAST)

001: MMLRLKGLTF LLLLVLCSSV HQCEARSGKN WSWRRSSSRA PSTSAFRRKG KAKSSSSGSH KQSGKGSRQS PYQPSPAITP ASPSGDPVQG NGSQAAPAPA
101: MPAPNGGGYG YPLLTPPPLQ PSPSATSPPA APSSQDTVFN VVDFGAKGDG VTDDTQAFEA AWAAACKVEA STVLVPSEHE FVVGPISFSG PYCKPNILFQ
201: LDGTILAQTS ARVWGSGLLQ WLEFTKLTGI AIQGSGVING RGQQWWTYSD PNDDDNDDAY YVELDKMPQI KPTALRFYGS SNVTVTGITI VNSSQCHLKF
301: DSCQGVMVHD LTISSPEHSP NTDGIHLQNS KEVSIHHTNL ACGDDCVSIQ TGCSDVNIHN VNCGPGHGIS IGGLGRYNTK ACVSNITVRD VKMFRTMTGV
401: RIKTWQGGSG LVQGIRFSNI QVSEVQTPII IDQFYCDKTT CRNQTSAVAV SGVQYENIRG TFTIKPAHFA CSDSSPCSEI TLTGIQLKPL LVPQYHLYNP
501: FCWQAFGELY TPTVPPISCL QIGKPAGNSV LSDGDLC

Best Arabidopsis Sequence Match ( AT1G60590.1 )
(BLAST)

001: MITRESLTLR SITMMTLVTI LVWSATLETC IARRGRHWRH HHRSSSSLSD SLSSKKPKSH ENNHHHMSHK SKPKPKMKTQ PPKSNDGSPV VSQPPQVQQP
101: PPPHVQPPPT PLPLQPVEDS QQFNVLDFGA KGDGMSDDTQ AFEAAWASAC KVEASTMIIP PDYIFLVGPI SFSGPYCQAN IVFQLEGMIV APTDTESWGG
201: GLMWWIEFTK LSGITIQGNG VIDGRGTVWW QQDYLSDYPI DDDFKLIVPL NNSVQERPPM PIRSELNWRM PSIKPTALRF YGSIDVTVTG ITIQNSPQCH
301: LKFDNCVKVL VHDVNVSSPG DSPNTDGIHL QNTRDVMIHT TTLACGDDCI SIQTGCSNVY VHNVNCGPGH GISIGSLGKD STKACVSNIT VRDVVMHNTM
401: TGVRIKTWQG GIGSVKGILF SNIQLTEVQL PIVIDQFYCD HSKCMNHTSA VSVEGVTYEK IRGTYTVKPV HFACSDSFPC IDVQLSGIEL KPVQLQYHMY
501: DPFCWKTFGE LNSATVPPID CLQIGKPARN GVHSDHDICL

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22699]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.