Factsheet for Solyc07g015870.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400077010	Potato	cytosol	90.42	87.69
Bra008748.1-P	Field mustard	extracellular	56.57	57.86
CDX69569	Canola	extracellular	56.57	57.86
HORVU3Hr1G031180.1	Barley	extracellular	18.04	57.45
CDY09873	Canola	extracellular	56.12	57.4
KRH56581	Soybean	extracellular	56.12	57.4
Os05t0578600-01	Rice	cytosol, extracellular	39.64	57.05
AT5G14650.1	Thale cress	extracellular	55.23	57.01
KRG93260	Soybean	extracellular	55.9	56.66
Os01t0637500-00	Rice	cytosol, extracellular	42.09	55.92
VIT_14s0066g01060.t01	Wine grape	extracellular	60.13	55.9
GSMUA_Achr4P02960_001	Banana	extracellular	57.02	53.89
Solyc05g005170.2.1	Tomato	nucleus	58.57	51.77
GSMUA_Achr6P22080_001	Banana	extracellular	55.23	51.13
GSMUA_Achr5P09080_001	Banana	extracellular	55.46	51.13
GSMUA_Achr1P27280_001	Banana	extracellular	55.68	49.02
TraesCS1A01G418000.1	Wheat	extracellular	53.9	47.45
TraesCS1B01G448100.1	Wheat	extracellular	54.79	46.42
TraesCS1D01G425600.1	Wheat	extracellular	54.34	46.3
HORVU3Hr1G056270.10	Barley	extracellular	54.34	45.86
EES20001	Sorghum	extracellular	54.79	45.81
EES01142	Sorghum	extracellular	54.12	45.68
TraesCS3A01G225800.2	Wheat	extracellular	54.79	45.64
TraesCS3B01G258600.2	Wheat	extracellular	53.9	45.07
Os01t0636500-01	Rice	extracellular	53.9	44.98
TraesCS3D01G223900.1	Wheat	extracellular	53.67	44.96
Zm00001d044110_P001	Maize	extracellular	53.9	44.65
Zm00001d009667_P001	Maize	extracellular, mitochondrion, plastid	51.0	44.38
Zm00001d011444_P002	Maize	extracellular	53.45	44.36
HORVU1Hr1G091430.5	Barley	extracellular	54.57	44.22
Solyc05g005040.2.1	Tomato	extracellular	44.32	42.25
Solyc12g009420.1.1	Tomato	extracellular	34.97	38.57
Solyc01g079130.1.1	Tomato	extracellular	40.31	38.35
Solyc09g098270.2.1	Tomato	cytosol	36.97	38.34
Solyc01g100980.2.1	Tomato	extracellular	39.64	37.4
Solyc03g113230.1.1	Tomato	extracellular	34.08	37.23
Solyc06g068040.2.1	Tomato	nucleus	35.86	36.84
Solyc08g060970.2.1	Tomato	nucleus	32.52	36.78
Solyc04g008230.2.1	Tomato	nucleus	40.09	36.73
Solyc03g116500.2.1	Tomato	nucleus	36.3	36.06
Solyc04g015530.1.1	Tomato	cytosol	31.4	35.97
Solyc04g025440.2.1	Tomato	extracellular	35.41	34.57
Solyc03g116580.2.1	Tomato	extracellular	32.07	32.95
Solyc01g087280.1.1	Tomato	extracellular	30.73	32.47
Solyc10g080210.1.1	Tomato	extracellular	32.74	32.17

Protein Annotations

MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	UniProt:K4CCA4	PFAM:PF00295	PANTHER:PTHR31375
PANTHER:PTHR31375:SF34	InterPro:PbH1	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc07g015870.2	EnsemblPlants:Solyc07g015870.2.1	UniParc:UPI000276BBE8	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:-:5629512..5634447

Molecular Weight (calculated)

49216.3 Da

IEP (calculated)

6.311

GRAVY (calculated)

-0.150

Length

449 amino acids

Sequence
(BLAST)

001: MSRFSTDLMN LVILLVLVIY YSLENATCNA RSQESSIENF YVFNVLDYGA KGDGITYDTK AFEATWIEAC KVEGSVMMVP SDYDFLVGPI TFSGSHCEKN
101: IVFQLDGRII APTNPKVWGV LQWLEFSKLN GIYVKGKGII DGQGSVWWKN TPLLIEEYEG DYYSEEQDDY APKIALITSK SKGKMPRTRP AALKFHGSFN
201: VVVTGITIQN SPKAHLKFDH CVAVQVYGIT VSSPGDSPNT DGIHLHNSQN VVINSSDIAC GDDCISIQTG SSAVFIHDVN CGPGHGFSIG GLGKDNTKAC
301: VSNITVQDST LQNTMTGVRI KTWQGGSGSV HGITFSNIHV SDVKIPIMID QFYCDKRKCG NHTSAVAISG VSYQSIEGTY SYKPVHFACS DSVPCTGVSL
401: ADIKLKPSLE KKHFYGPYCW ETYGELRTNT TPPIDCIQPD KRIPSYDSC

Best Arabidopsis Sequence Match ( AT1G60590.1 )
(BLAST)

001: MITRESLTLR SITMMTLVTI LVWSATLETC IARRGRHWRH HHRSSSSLSD SLSSKKPKSH ENNHHHMSHK SKPKPKMKTQ PPKSNDGSPV VSQPPQVQQP
101: PPPHVQPPPT PLPLQPVEDS QQFNVLDFGA KGDGMSDDTQ AFEAAWASAC KVEASTMIIP PDYIFLVGPI SFSGPYCQAN IVFQLEGMIV APTDTESWGG
201: GLMWWIEFTK LSGITIQGNG VIDGRGTVWW QQDYLSDYPI DDDFKLIVPL NNSVQERPPM PIRSELNWRM PSIKPTALRF YGSIDVTVTG ITIQNSPQCH
301: LKFDNCVKVL VHDVNVSSPG DSPNTDGIHL QNTRDVMIHT TTLACGDDCI SIQTGCSNVY VHNVNCGPGH GISIGSLGKD STKACVSNIT VRDVVMHNTM
401: TGVRIKTWQG GIGSVKGILF SNIQLTEVQL PIVIDQFYCD HSKCMNHTSA VSVEGVTYEK IRGTYTVKPV HFACSDSFPC IDVQLSGIEL KPVQLQYHMY
501: DPFCWKTFGE LNSATVPPID CLQIGKPARN GVHSDHDICL

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22699]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.