Factsheet for HORVU3Hr1G056270.10

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G031180.1	Barley	extracellular	26.5	100.0
TraesCS3A01G225800.2	Wheat	extracellular	96.24	94.99
TraesCS3D01G223900.1	Wheat	extracellular	95.3	94.59
TraesCS3B01G258600.2	Wheat	extracellular	95.11	94.23
Os01t0637500-00	Rice	cytosol, extracellular	56.2	88.46
Os01t0636500-01	Rice	extracellular	85.9	84.94
EES01142	Sorghum	extracellular	82.14	82.14
Zm00001d011444_P002	Maize	extracellular	82.52	81.15
Zm00001d044110_P001	Maize	extracellular	81.02	79.52
HORVU1Hr1G091430.5	Barley	extracellular	70.86	68.05
GSMUA_Achr6P22080_001	Banana	extracellular	61.28	67.22
GSMUA_Achr5P09080_001	Banana	extracellular	60.9	66.53
GSMUA_Achr4P02960_001	Banana	extracellular	58.27	65.26
GSMUA_Achr1P27280_001	Banana	extracellular	59.59	62.16
VIT_01s0127g00400.t01	Wine grape	extracellular, mitochondrion, plastid	60.15	61.78
KRG99364	Soybean	extracellular, nucleus	60.71	60.04
CDX69569	Canola	extracellular	49.25	59.68
KRH45648	Soybean	nucleus	60.34	59.67
CDY09873	Canola	extracellular	48.87	59.23
Bra008748.1-P	Field mustard	extracellular	48.87	59.23
AT5G14650.1	Thale cress	extracellular	48.31	59.08
Bra031724.1-P	Field mustard	extracellular	57.14	59.03
PGSC0003DMT400035162	Potato	extracellular	56.02	58.32
KRG93260	Soybean	extracellular	48.5	58.24
KRH56581	Soybean	extracellular	47.93	58.09
CDY37962	Canola	extracellular, golgi, vacuole	58.08	58.08
Solyc05g005170.2.1	Tomato	nucleus	55.45	58.07
CDY54228	Canola	extracellular, golgi, vacuole	57.33	57.77
CDX93397	Canola	extracellular, golgi, vacuole	57.71	57.6
Bra019912.1-P	Field mustard	extracellular, golgi, vacuole	57.71	57.6
VIT_14s0066g01060.t01	Wine grape	extracellular	52.26	57.56
CDY50367	Canola	extracellular, golgi	57.71	57.28
CDY47212	Canola	extracellular	57.52	57.09
AT1G60590.1	Thale cress	extracellular	57.89	57.04
Bra027148.1-P	Field mustard	extracellular	57.33	56.9
Bra018429.1-P	Field mustard	extracellular, golgi, vacuole	56.77	56.87
CDY20962	Canola	extracellular, golgi, vacuole	56.58	56.69
CDY20612	Canola	extracellular	56.2	56.31
CDY34877	Canola	extracellular, golgi	51.69	56.24
AT1G10640.1	Thale cress	extracellular, golgi	56.2	56.2
Solyc07g015870.2.1	Tomato	extracellular	45.86	54.34
PGSC0003DMT400077010	Potato	cytosol	45.86	52.7
HORVU1Hr1G067840.1	Barley	extracellular, plastid	37.22	41.6
HORVU7Hr1G078960.2	Barley	extracellular	37.78	41.1
HORVU5Hr1G109970.1	Barley	extracellular	30.45	39.04
HORVU1Hr1G013520.1	Barley	cytosol	28.57	38.68
HORVU7Hr1G034150.1	Barley	extracellular	30.08	38.65
HORVU0Hr1G038940.1	Barley	cytosol	28.95	38.12
HORVU5Hr1G109980.2	Barley	extracellular, plastid	31.58	37.42
HORVU2Hr1G096130.1	Barley	extracellular	28.2	37.04
HORVU3Hr1G024420.1	Barley	cytosol	15.23	36.32
HORVU1Hr1G079130.2	Barley	extracellular	26.69	32.72
HORVU3Hr1G006180.2	Barley	extracellular	25.94	32.09
HORVU6Hr1G015390.2	Barley	extracellular, golgi	29.32	29.55
HORVU1Hr1G079140.6	Barley	plastid	25.0	27.2

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.3	UniProt:A0A287L4Y4	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU3Hr1G056270
EnsemblPlants:HORVU3Hr1G056270.10	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31375	PANTHER:PTHR31375:SF56	InterPro:PbH1
InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000B46B0F7	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:421524114..421528184

Molecular Weight (calculated)

57151.1 Da

IEP (calculated)

8.723

GRAVY (calculated)

-0.280

Length

532 amino acids

Sequence
(BLAST)

001: MKLRVKGLGL LLLLVLLALC STIDVCDARR GKHWRPRSSP SSSLLKKKGK TKKGSSHRQH GSNRRSPPPG PAVGKGYPSP NVPVTPSQSP KPSPAKSNGH
101: TSPPQPPSPS CGKGTQPPPQ PPPAPVASPG AVFNVVDFGA KGDGVSDDTK AFQSAWAAAC KQGASTVLVP SELEFLVGPI SFSGPYCKPN ILFQLEGTIL
201: APTNAKAWGS GLLQWLEFTK LSGLSIQGSG TINGRGQQWW TYSDPNDDED TFQQYNQELE RMPRVKPTAL RFYGSSNVVV AGITIVNSSQ CHLKFDNCQG
301: VLVHDLTISS PENSLNTDGI HLQNSKDVSI HHTNLACGDD CISIQTGCSN IYIHNVNCGP GHGISIGGLG RDNTKACVSN VTVRDVNMFR TMTGVRIKTW
401: QGGIGLVQDI RFSNIQVSEV QTPIMIDQFY CDKRTCTNQT SAVAVSGVQY ENIRGTFTIK PLHFACSDSS PCSGITLTGV QLKPVQIAHY HLNNPFCWQA
501: FGELFTPTIP PIACLQIGKP AGNNLQSYHD IC

Best Arabidopsis Sequence Match ( AT1G60590.1 )
(BLAST)

001: MITRESLTLR SITMMTLVTI LVWSATLETC IARRGRHWRH HHRSSSSLSD SLSSKKPKSH ENNHHHMSHK SKPKPKMKTQ PPKSNDGSPV VSQPPQVQQP
101: PPPHVQPPPT PLPLQPVEDS QQFNVLDFGA KGDGMSDDTQ AFEAAWASAC KVEASTMIIP PDYIFLVGPI SFSGPYCQAN IVFQLEGMIV APTDTESWGG
201: GLMWWIEFTK LSGITIQGNG VIDGRGTVWW QQDYLSDYPI DDDFKLIVPL NNSVQERPPM PIRSELNWRM PSIKPTALRF YGSIDVTVTG ITIQNSPQCH
301: LKFDNCVKVL VHDVNVSSPG DSPNTDGIHL QNTRDVMIHT TTLACGDDCI SIQTGCSNVY VHNVNCGPGH GISIGSLGKD STKACVSNIT VRDVVMHNTM
401: TGVRIKTWQG GIGSVKGILF SNIQLTEVQL PIVIDQFYCD HSKCMNHTSA VSVEGVTYEK IRGTYTVKPV HFACSDSFPC IDVQLSGIEL KPVQLQYHMY
501: DPFCWKTFGE LNSATVPPID CLQIGKPARN GVHSDHDICL

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22699]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.