Factsheet for HORVU1Hr1G013520.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G083700.1	Wheat	extracellular	70.23	91.39
TraesCS1D01G066400.1	Wheat	cytosol	78.37	80.84
TraesCS1D01G066300.1	Wheat	extracellular, golgi	88.8	69.94
HORVU7Hr1G034150.1	Barley	extracellular	55.98	53.14
HORVU5Hr1G109970.1	Barley	extracellular	52.93	50.12
HORVU5Hr1G109980.2	Barley	extracellular, plastid	54.71	47.88
HORVU0Hr1G038940.1	Barley	cytosol	44.27	43.07
HORVU3Hr1G024420.1	Barley	cytosol	23.66	41.7
HORVU2Hr1G096130.1	Barley	extracellular	38.42	37.28
HORVU3Hr1G031180.1	Barley	extracellular	12.47	34.75
HORVU1Hr1G067840.1	Barley	extracellular, plastid	39.19	32.35
HORVU7Hr1G078960.2	Barley	extracellular	38.68	31.08
HORVU1Hr1G079130.2	Barley	extracellular	33.08	29.95
HORVU6Hr1G015390.2	Barley	extracellular, golgi	40.2	29.92
HORVU3Hr1G056270.10	Barley	extracellular	38.68	28.57
HORVU3Hr1G006180.2	Barley	extracellular	31.04	28.37
HORVU1Hr1G079140.6	Barley	plastid	33.84	27.2
HORVU1Hr1G091430.5	Barley	extracellular	37.15	26.35

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A287EP03	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU1Hr1G013520
EnsemblPlants:HORVU1Hr1G013520.1	InterPro:IPR012334	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF39
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	UniParc:UPI000B465854
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:35975927..35977108

Molecular Weight (calculated)

42965.6 Da

IEP (calculated)

5.812

GRAVY (calculated)

-0.441

Length

393 amino acids

Sequence
(BLAST)

001: PEPSQSESAI EVDVASYGAV GDGQQDDTRA FQKAWADVCS SSQPATLVVP REKTYLVKQT TFLGNCKSPV TFRLDGKMVA PASRSAWPKE NMRWWIMFRD
101: VDRLTVTGDG TIDGNGEMWW KTSCRVDKKL KCTDAPMALL LSKCNNLTVE NIQLLNSQQI HMSVEDCQDV LLKGITITAP GDSPNNDGIH IARTKDIQVL
201: DCDIKTGDDC MSIETGTENL YASRISCGPG HGISIGSLGD DNSEAQVSNI TVYKAHLSGT TNGVRMKSWQ GGKGYAKDIT FEDITMEDVH NPIIIDQNYC
301: TSADPANPKP CKKQTSAVEF SNIQFKNIRG TSATEEAIKL DCSDTVPCHD ILLQDVELTF RGHKHKHKHA SATSVCNNVK LTESGSNVVP KTC

Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)

001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S

Arabidopsis Description

ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.