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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G402200.1 Wheat extracellular 83.21 86.19
TraesCS2B01G423400.1 Wheat plastid 73.83 85.19
TraesCS2B01G423300.1 Wheat extracellular 81.73 82.54
TraesCS2A01G405300.1 Wheat extracellular, nucleus 82.47 82.47
TraesCS2D01G402100.1 Wheat extracellular 81.73 81.73
TraesCS2D01G402300.1 Wheat extracellular 64.44 78.38
TraesCS2A01G405600.1 Wheat extracellular 61.48 78.06
KXG26899 Sorghum extracellular 60.49 58.33
GSMUA_Achr11P... Banana extracellular 42.72 41.59
HORVU3Hr1G024420.1 Barley cytosol 22.72 41.26
KRH14715 Soybean cytosol, extracellular, nucleus, plastid 35.06 40.92
CDY50769 Canola extracellular 34.07 40.35
KRH23786 Soybean cytosol, extracellular, nucleus, plastid 35.8 40.28
CDX73440 Canola extracellular 39.26 39.75
KRG88958 Soybean extracellular 34.81 39.72
CDY69377 Canola extracellular 39.01 39.5
VIT_09s0096g00850.t01 Wine grape cytoskeleton, cytosol, peroxisome 36.05 39.35
CDY39404 Canola extracellular 38.77 39.35
AT4G35670.1 Thale cress extracellular 38.27 39.34
Bra025099.1-P Field mustard extracellular 38.77 39.25
AT5G44830.1 Thale cress extracellular 32.1 39.16
HORVU5Hr1G109970.1 Barley extracellular 40.0 39.04
Bra025103.1-P Field mustard extracellular 38.27 38.75
CDY39399 Canola extracellular 38.27 38.75
KRH66273 Soybean extracellular 29.63 38.71
AT5G44840.1 Thale cress extracellular 37.28 38.62
HORVU1Hr1G013520.1 Barley cytosol 37.28 38.42
VIT_09s0002g06650.t01 Wine grape extracellular 38.27 38.37
VIT_09s0002g06610.t01 Wine grape extracellular 36.54 38.05
KRH66276 Soybean extracellular 33.33 38.03
CDY47032 Canola extracellular 37.78 37.97
HORVU7Hr1G034150.1 Barley extracellular 38.52 37.68
CDX72553 Canola extracellular 37.28 37.47
PGSC0003DMT400008955 Potato extracellular 32.1 37.36
Solyc08g060970.2.1 Tomato nucleus 36.54 37.28
PGSC0003DMT400056828 Potato extracellular 36.54 37.19
HORVU0Hr1G038940.1 Barley cytosol 37.04 37.13
KRH05150 Soybean extracellular 24.2 36.43
KRH48978 Soybean extracellular 26.67 36.24
CDX85471 Canola extracellular 35.8 35.71
HORVU5Hr1G109980.2 Barley extracellular, plastid 39.51 35.63
CDY30105 Canola extracellular 39.26 35.41
VIT_09s0002g06580.t01 Wine grape cytosol 33.83 35.04
Bra027211.1-P Field mustard extracellular 39.01 35.03
CDX97703 Canola extracellular 39.01 34.96
KRH23567 Soybean extracellular 34.57 34.91
Solyc03g116580.2.1 Tomato extracellular 37.53 34.78
Bra001605.1-P Field mustard extracellular 38.27 34.29
CDX75843 Canola extracellular 38.27 34.22
AT5G17200.1 Thale cress extracellular 35.56 34.2
CDY02729 Canola extracellular 36.05 34.11
CDY30107 Canola extracellular 38.27 33.99
Bra023600.1-P Field mustard extracellular 35.8 33.88
CDY58462 Canola extracellular 37.78 33.77
CDX97704 Canola extracellular 38.02 33.77
Bra027210.1-P Field mustard extracellular 38.02 33.77
KRH09740 Soybean extracellular 35.31 33.65
CDY16952 Canola extracellular 36.05 33.64
AT3G15720.1 Thale cress extracellular 37.78 33.55
Bra008572.1-P Field mustard extracellular 35.8 33.41
Bra011341.1-P Field mustard cytosol 32.35 33.33
KRH66305 Soybean extracellular 31.36 32.99
CDX69397 Canola extracellular 32.35 32.43
CDX75239 Canola cytosol 32.35 32.27
CDX68839 Canola cytosol 32.35 32.27
AT4G32370.1 Thale cress extracellular 26.67 31.58
HORVU1Hr1G079130.2 Barley extracellular 33.09 30.88
HORVU1Hr1G067840.1 Barley extracellular, plastid 36.05 30.67
HORVU3Hr1G031180.1 Barley extracellular 10.62 30.5
AT5G27530.1 Thale cress cytosol 34.32 30.35
HORVU6Hr1G015390.2 Barley extracellular, golgi 38.77 29.73
CDY39884 Canola extracellular 31.36 28.54
HORVU7Hr1G078960.2 Barley extracellular 34.32 28.43
HORVU3Hr1G006180.2 Barley extracellular 30.12 28.37
HORVU1Hr1G079140.6 Barley plastid 34.07 28.22
HORVU3Hr1G056270.10 Barley extracellular 37.04 28.2
Bra040077.1-P Field mustard extracellular 24.94 27.67
AT4G32380.1 Thale cress extracellular 30.86 27.59
HORVU1Hr1G091430.5 Barley extracellular 36.79 26.9
AT4G32375.1 Thale cress extracellular 23.95 22.93
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798InterPro:Glyco_hydro_28EnsemblPlantsGene:HORVU2Hr1G096130
EnsemblPlants:HORVU2Hr1G096130.1InterPro:IPR012334UniProt:M0UPI1PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375
PANTHER:PTHR31375:SF45InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI000296E215
SEG:seg:::::
Description
No Description!
Coordinates
chrchr2H:+:673151242..673153832
Molecular Weight (calculated)
42933.1 Da
IEP (calculated)
8.025
GRAVY (calculated)
-0.001
Length
405 amino acids
Sequence
(BLAST)
001: MGIIGILRPA ILLLAGLAWC SELVAAAGRV DGVFNVKEYG ARGDGTTDDT KAFVDAWTAA CRARGSPATL LVPAANSFIV GPTRFSGPCA STRITVQVMG
101: TITAPPAGAW RELEYWLMFY QVHGLTVTGG STGLLDGRGG TWWRKKCKDH ADCISRAPTG LVVMNCIDVE LSQFHSKDSP QMHIAVSMSS NVNVAQLTIT
201: APWDSPNTDG VHIDRSDHVR VTGSTIGTGD DCVSIGSGTR FVTVDGIVCG PGHGVSVGSL GKKGAAVSVE YIDVRNVQFI NTMNGARIKT WQGGKGYAKS
301: ISFTDINFTN VEHPVVINQF YVDRHHVPNN MGAVALSNIT YTNLSGTSRR KTAVEFDCSE SGSCTNIHVN SVAITAADGG GTVARCRNVQ GDTSGYVYPK
401: IPCLR
Best Arabidopsis Sequence Match ( AT4G35670.1 )
(BLAST)
001: MKTILDISIL INFLCFGIVY GKNYNVLNFD AKGDGQTDDS EAFLQAWTAA CGGDGDIKTL LIPSGKTFLL QPTVFQGPCK SSSIKVQLDG TIVAPSDKFA
101: WSDPISRMWI KFSTVSGLII VGSGTIDSRG SSFWELNLKA SQRPTALHIS KCDNLRINGI TSIDSPKNHI SIKTCNTVAI SNINLFAPET SPNTDGIDIS
201: DSTNINIFDS TIQTGDDCIA INSGSSNINI TGINCGPGHG ISVGSLGAGG AEAKVSDVQV THCTFNQTTN GARIKTWLGG QGYARNISFT DITLVNTKNP
301: IIIDQHYIDK GRLTEESAVA ISNVKFVDFR GTSSNKNAIT LKCSETTHCV DVVMDGIDIT MANGGKPKVN CQYVDGESSD TDLMRDCFKN NTSS
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JN47]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.