Factsheet for HORVU1Hr1G067840.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 3
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G311000.1	Wheat	extracellular	95.59	94.99
TraesCS1A01G311100.1	Wheat	extracellular	96.43	94.83
TraesCS1B01G322500.1	Wheat	extracellular	96.43	94.83
Os01t0296200-00	Rice	extracellular	48.32	86.47
Zm00001d040589_P001	Maize	extracellular	81.72	77.96
Zm00001d009057_P001	Maize	extracellular	68.28	76.83
EES00620	Sorghum	extracellular	80.46	75.69
GSMUA_Achr11P...	Banana	extracellular	56.3	61.47
CDY67535	Canola	extracellular	39.29	60.13
GSMUA_Achr9P16670_001	Banana	extracellular, plasma membrane	61.97	58.88
PGSC0003DMT400007095	Potato	cytosol	53.15	58.16
KRH31755	Soybean	extracellular	57.98	58.11
KRH69173	Soybean	extracellular	57.35	57.72
KRG96576	Soybean	extracellular	54.2	55.84
KRH68311	Soybean	extracellular	53.99	55.63
VIT_14s0060g00620.t01	Wine grape	extracellular	53.99	55.39
PGSC0003DMT400013344	Potato	extracellular	54.83	55.3
VIT_07s0005g02090.t01	Wine grape	extracellular	53.57	54.84
Solyc01g100980.2.1	Tomato	extracellular	54.62	54.62
Bra032600.1-P	Field mustard	extracellular	56.3	54.58
Solyc01g079130.1.1	Tomato	extracellular	53.99	54.45
CDX89966	Canola	extracellular	56.09	54.38
CDY15246	Canola	extracellular	55.88	54.18
Bra033328.1-P	Field mustard	extracellular	55.88	54.18
AT1G02460.1	Thale cress	extracellular	55.88	54.18
CDX77909	Canola	extracellular	55.67	53.97
KRG96690	Soybean	extracellular	51.47	53.38
AT4G01890.1	Thale cress	extracellular	51.05	52.03
GSMUA_Achr3P08400_001	Banana	extracellular	61.13	51.78
HORVU7Hr1G078960.2	Barley	extracellular	53.15	51.74
Bra000911.1-P	Field mustard	extracellular, vacuole	51.26	50.21
HORVU3Hr1G031180.1	Barley	extracellular	13.66	46.1
CDY71357	Canola	extracellular, vacuole	30.04	45.11
HORVU1Hr1G013520.1	Barley	cytosol	32.35	39.19
HORVU7Hr1G034150.1	Barley	extracellular	33.61	38.65
HORVU3Hr1G056270.10	Barley	extracellular	41.6	37.22
HORVU0Hr1G038940.1	Barley	cytosol	31.51	37.13
HORVU3Hr1G024420.1	Barley	cytosol	17.23	36.77
HORVU1Hr1G091430.5	Barley	extracellular	42.65	36.64
HORVU5Hr1G109970.1	Barley	extracellular	31.51	36.14
HORVU2Hr1G096130.1	Barley	extracellular	30.67	36.05
HORVU1Hr1G079130.2	Barley	extracellular	31.3	34.33
HORVU5Hr1G109980.2	Barley	extracellular, plastid	32.35	34.3
HORVU3Hr1G006180.2	Barley	extracellular	30.25	33.49
HORVU6Hr1G015390.2	Barley	extracellular, golgi	35.5	32.01
HORVU1Hr1G079140.6	Barley	plastid	30.46	29.65

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575
GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043
GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	EnsemblPlantsGene:HORVU1Hr1G067840	EnsemblPlants:HORVU1Hr1G067840.1
InterPro:IPR012334	UniProt:M0WPS7	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF99
InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000295B304	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:479358547..479360827

Molecular Weight (calculated)

50069.7 Da

IEP (calculated)

6.496

GRAVY (calculated)

-0.153

Length

476 amino acids

Sequence
(BLAST)

001: MEARTAIALL LALVVAASFL CDGVHSRHHH HSKRHSARPP SHAPGPSGPR RAPSPSHSSP SAPPPPMPGA PAPAPSDDGD SVYDVIKDFG AVGDGVTDDT
101: DAIKTAWDTA CQEDGESVVL AAAGHSFLVH TTTFTGPCQG SVTLQIDGAI VAPSEPTAWP ANSKRNWLVF YKADGTSLRG SGLIDGKGQK WWDLPCKPHK
201: GGSTHGPCDS PVALRFFMSN NVTVQGLKVQ NSPEFHFRFD SCRGVRVDSL SISSPALSPN TDGIHVENTQ DVLITNTVVS NGDDCVSIGA GTLNVHIENV
301: TCGPGHGISI GSLGKQGSRA CVANITVRNA VIRHSDNGVR IKTWQGGSGS VSAVTFENVR MDAVRNPIII DQYYCLTKSC ENATTAVFVS DITYAGIRGT
401: YDVRGPPIHF GCSDAVPCTN ITLSGVELLP ASGDTVDSPF CWNVYGNTTT PIVPPVACLI EGVPKNVDET SSLKCY

Best Arabidopsis Sequence Match ( AT1G02460.1 )
(BLAST)

001: MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG
101: ETDDTEAFKT AWDSSCNNEN NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGEG VIDGRGQKWW
201: DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL QGSLVDKCGS S

Arabidopsis Description

At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.