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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX89966 Canola extracellular 98.57 98.57
Bra033328.1-P Field mustard extracellular 98.17 98.17
CDX77909 Canola extracellular 93.48 93.48
AT1G02460.1 Thale cress extracellular 88.8 88.8
CDY67535 Canola extracellular 56.01 88.42
KRH69173 Soybean extracellular 63.95 66.38
KRH31755 Soybean extracellular 64.15 66.32
PGSC0003DMT400013344 Potato extracellular 63.75 66.31
KRH68311 Soybean extracellular 62.32 66.23
KRG96576 Soybean extracellular 62.32 66.23
Solyc01g079130.1.1 Tomato extracellular 63.34 65.89
VIT_07s0005g02090.t01 Wine grape extracellular 61.1 64.52
Os01t0296200-00 Rice extracellular 33.6 62.03
CDY71357 Canola extracellular, vacuole 39.31 60.88
GSMUA_Achr11P... Banana extracellular 53.36 60.09
CDY41695 Canola extracellular 50.31 56.78
HORVU1Hr1G067840.1 Barley extracellular, plastid 54.18 55.88
TraesCS1A01G311100.1 Wheat extracellular 54.79 55.58
TraesCS1D01G311000.1 Wheat extracellular 54.18 55.53
CDX95284 Canola extracellular 45.42 55.2
TraesCS1B01G322500.1 Wheat extracellular 54.38 55.17
GSMUA_Achr9P16670_001 Banana extracellular, plasma membrane 54.79 53.69
CDY43307 Canola extracellular 49.69 51.59
CDX93644 Canola extracellular 49.49 51.48
Zm00001d040589_P001 Maize extracellular 51.93 51.1
EES00620 Sorghum extracellular 51.73 50.2
Zm00001d009057_P001 Maize extracellular 42.57 49.41
GSMUA_Achr3P08400_001 Banana extracellular 53.77 46.98
CDY09873 Canola extracellular 38.49 43.05
CDX69569 Canola extracellular 38.49 43.05
CDY54292 Canola cytosol 35.23 38.79
CDY04708 Canola plastid 21.79 38.63
CDX67693 Canola extracellular 34.01 38.57
CDY25786 Canola cytosol 35.03 38.56
CDY54312 Canola extracellular 34.83 38.51
CDY11585 Canola extracellular 36.46 38.33
CDY57689 Canola extracellular 34.83 38.26
CDX72025 Canola extracellular 33.6 38.19
CDY47139 Canola extracellular 36.25 38.12
CDY54228 Canola extracellular, golgi, vacuole 40.73 37.88
CDY20612 Canola extracellular 40.73 37.66
CDY20962 Canola extracellular, golgi, vacuole 40.53 37.48
CDY48768 Canola extracellular 33.2 37.47
CDX79907 Canola extracellular 32.99 37.24
CDY34877 Canola extracellular, golgi 37.07 37.22
CDX93397 Canola extracellular, golgi, vacuole 40.33 37.15
CDY37962 Canola extracellular, golgi, vacuole 40.12 37.03
CDY13645 Canola extracellular 35.44 37.02
CDY06902 Canola extracellular 32.59 36.95
CDY14791 Canola extracellular 32.59 36.95
CDY37571 Canola cytosol 28.11 36.9
CDX83631 Canola extracellular 35.23 36.73
CDY38648 Canola cytosol 27.9 36.63
CDY56952 Canola extracellular 31.36 36.58
CDY47212 Canola extracellular 39.92 36.57
CDY50367 Canola extracellular, golgi 39.92 36.57
CDX74418 Canola extracellular 31.16 36.26
CDY07963 Canola extracellular 31.16 34.93
CDY35976 Canola extracellular 29.94 34.92
CDY28005 Canola extracellular 29.74 34.68
CDX74019 Canola extracellular 30.75 34.55
CDY44150 Canola extracellular, golgi, plastid 35.23 34.46
CDX72553 Canola extracellular 27.9 33.99
CDY69377 Canola extracellular 27.49 33.75
CDY47032 Canola extracellular 27.49 33.5
CDY39404 Canola extracellular 27.09 33.33
CDY50769 Canola extracellular 23.22 33.33
CDX73440 Canola extracellular 27.09 33.25
CDY39399 Canola extracellular 26.88 33.0
CDX97703 Canola extracellular 29.94 32.52
CDY30105 Canola extracellular 29.74 32.52
CDX85471 Canola extracellular 26.48 32.02
CDX97704 Canola extracellular 29.53 31.8
CDY30107 Canola extracellular 29.53 31.8
CDX75843 Canola extracellular 29.33 31.79
CDY58462 Canola extracellular 29.12 31.57
CDY41445 Canola endoplasmic reticulum 35.44 31.3
CDY16952 Canola extracellular 27.49 31.11
CDX75239 Canola cytosol 25.46 30.79
CDX68839 Canola cytosol 25.46 30.79
CDY02729 Canola extracellular 26.68 30.61
CDY61868 Canola extracellular 33.81 30.24
CDX69397 Canola extracellular 24.64 29.95
CDY39884 Canola extracellular 24.85 27.42
CDY06100 Canola extracellular 22.61 26.0
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078FQ23UniProt:A0A078FQ23EnsemblPlants:CDY15246ProteinID:CDY15246
ProteinID:CDY15246.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00085443001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
PANTHER:PTHR31375PANTHER:PTHR31375:SF43InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710
SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EBF0E8SEG:seg::
Description
BnaC05g01250DBnaC05g01250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FQ23]
Coordinates
chrLK032052:-:650546..652781
Molecular Weight (calculated)
53389.7 Da
IEP (calculated)
6.453
GRAVY (calculated)
-0.281
Length
491 amino acids
Sequence
(BLAST)
001: MFVCSYTRNN ILCFIALILT LTSLTESRYH HHKEKHKHNS HNHHSSKPEP PSSSISQPPT PPPGPNDSPS PSLPPSPSDE PEEDNNGFYN VRKFGAVGDG
101: VTDDTEAFKT AWDSSCSNKN DTVSVLFVPY GYTFMIHSTI FTGPCHSYQI LQVDGTIITP DGPESWPSNI SKRQWLVFYR VNGMALKGAG VIDGRGQKWW
201: DLPCKPHRSV NKSAIFAGPC DSPIALRFFM SSNLTVEGLM IKNSPQFNFR FDGCQGVHVE SVHITAPPLS PNTDGIHIEN SNSVTIYNSV ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SHACVSNITV RDSIIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVESVRNP IIIDQYYCMT KDCSNKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAIP CTNLTLSGIE LLPAKGDIVR DPFCWNAYGL AEELSIPPVW CLMSDPPTAL QGALVDKCGS P
Best Arabidopsis Sequence Match ( AT1G02460.1 )
(BLAST)
001: MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG
101: ETDDTEAFKT AWDSSCNNEN NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGEG VIDGRGQKWW
201: DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL QGSLVDKCGS S
Arabidopsis Description
At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.