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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018707.1-P Field mustard extracellular 100.0 100.0
CDY43307 Canola extracellular 99.36 99.15
AT1G48100.1 Thale cress extracellular 91.1 90.53
KRH36916 Soybean extracellular, nucleus 71.61 71.31
KRH11881 Soybean extracellular 72.25 71.19
VIT_05s0020g00420.t01 Wine grape extracellular 71.61 70.86
Os05t0279900-00 Rice cytosol 44.92 67.3
KRH42407 Soybean extracellular 68.64 66.94
GSMUA_Achr8P06220_001 Banana extracellular 65.68 66.24
KRH58524 Soybean extracellular 68.22 65.71
PGSC0003DMT400075723 Potato extracellular 66.74 64.81
Solyc04g008230.2.1 Tomato nucleus 67.16 64.69
GSMUA_Achr8P22240_001 Banana extracellular 61.86 61.22
TraesCS7B01G230600.1 Wheat extracellular 59.53 57.7
TraesCS7A01G330000.1 Wheat extracellular 59.53 57.58
TraesCS7D01G326800.1 Wheat extracellular 59.53 57.58
HORVU7Hr1G078960.2 Barley extracellular 59.32 57.26
CDY67535 Canola extracellular 36.44 55.31
CDY41695 Canola extracellular 48.09 52.18
CDX95284 Canola extracellular 44.28 51.73
Zm00001d040725_P002 Maize extracellular, vacuole 54.87 51.59
CDX77909 Canola extracellular 53.6 51.53
KXG32428 Sorghum mitochondrion 54.87 49.81
CDX89966 Canola extracellular 51.48 49.49
CDY15246 Canola extracellular 51.48 49.49
CDY71357 Canola extracellular, vacuole 30.72 45.74
CDX69569 Canola extracellular 40.68 43.74
CDY09873 Canola extracellular 40.68 43.74
CDY13645 Canola extracellular 38.77 38.94
CDX83631 Canola extracellular 38.77 38.85
CDY20612 Canola extracellular 43.64 38.79
CDY20962 Canola extracellular, golgi, vacuole 43.43 38.61
CDY54228 Canola extracellular, golgi, vacuole 43.01 38.45
CDX93397 Canola extracellular, golgi, vacuole 43.22 38.27
CDY37962 Canola extracellular, golgi, vacuole 43.01 38.16
CDY50367 Canola extracellular, golgi 43.01 37.87
CDY47212 Canola extracellular 43.01 37.87
KXG32426 Sorghum extracellular 54.87 37.43
CDY54312 Canola extracellular 35.17 37.39
CDX72025 Canola extracellular 33.9 37.04
CDY57689 Canola extracellular 34.96 36.91
CDY34877 Canola extracellular, golgi 37.92 36.61
CDX67693 Canola extracellular 33.26 36.26
CDY14791 Canola extracellular 33.26 36.26
CDY06902 Canola extracellular 33.26 36.26
CDY37571 Canola cytosol 28.6 36.1
CDY38648 Canola cytosol 28.39 35.83
CDY04708 Canola plastid 20.97 35.74
CDY48768 Canola extracellular 32.84 35.63
CDY56952 Canola extracellular 31.78 35.63
CDX74418 Canola extracellular 31.78 35.55
CDY07963 Canola extracellular 32.84 35.39
CDY25786 Canola cytosol 33.26 35.2
CDY11585 Canola extracellular 34.75 35.12
CDY47139 Canola extracellular 34.75 35.12
CDY54292 Canola cytosol 33.05 34.98
CDX79907 Canola extracellular 32.2 34.94
CDY35976 Canola extracellular 31.14 34.92
CDY28005 Canola extracellular 31.14 34.92
CDX74019 Canola extracellular 32.2 34.78
Zm00001d009167_P001 Maize extracellular 55.08 33.94
Os01t0329300-01 Rice plastid 54.45 33.86
CDX85471 Canola extracellular 28.6 33.25
CDY44150 Canola extracellular, golgi, plastid 35.17 33.07
CDY69377 Canola extracellular 27.97 33.0
CDY02729 Canola extracellular 29.45 32.48
CDY39404 Canola extracellular 27.33 32.33
CDY47032 Canola extracellular 26.91 31.51
CDX73440 Canola extracellular 26.69 31.5
CDY50769 Canola extracellular 22.67 31.29
CDX72553 Canola extracellular 26.69 31.27
CDY39399 Canola extracellular 26.48 31.25
CDY30105 Canola extracellular 29.66 31.18
CDX75843 Canola extracellular 29.87 31.13
CDY58462 Canola extracellular 29.66 30.91
CDX75239 Canola cytosol 26.48 30.79
CDX97703 Canola extracellular 29.45 30.75
CDX68839 Canola cytosol 26.27 30.54
CDX97704 Canola extracellular 29.45 30.48
CDY30107 Canola extracellular 29.24 30.26
CDY16952 Canola extracellular 27.75 30.18
CDY41445 Canola endoplasmic reticulum 34.53 29.32
CDX69397 Canola extracellular 24.58 28.71
CDY61868 Canola extracellular 32.2 27.69
CDY39884 Canola extracellular 25.21 26.74
CDY06100 Canola extracellular 24.15 26.7
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078DYY5EnsemblPlants:CDX93644ProteinID:CDX93644ProteinID:CDX93644.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00156330001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF26InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126TMHMM:TMhelixUniParc:UPI000253ED68
SEG:seg:::::
Description
BnaA06g04040D
Coordinates
chrLK031876:+:1114376..1117226
Molecular Weight (calculated)
50890.8 Da
IEP (calculated)
4.484
GRAVY (calculated)
-0.200
Length
472 amino acids
Sequence
(BLAST)
001: MRILSGILVV YFISTLLFGQ LIYVARGRFH YHKRRGLSDP PPPPPAVTAN PPQVPSDPYP NPNPDPAPGD SDSGCIFDVT SFGAVGDGSC DDTAAFKDAW
101: KAACAVESSV VLAPEGGVFK ITSTIFSGPC KPGLVFQLDG VLMPPDGPEE WPEKDSKSQW LVFYRLDGFT FAGKGTVEGN GQKWWDLPCK PHRGPDGSSS
201: SEPCVSPTMI RFFMSNNIEV GGLRIQNSPQ FHMKFDGCEG VSINDIQISS PKLSPNTDGI HLGNTRSVAI HNSVVSNGDD CISIGTGCSD IDIQGVTCGP
301: SHGISIGSLG VHNSQACVSN ITVRNTVIRD SDNGLRVKTW QGGTGSVSNL LFENIQMENV LNCIIVDQYY CQSKECRNET SAVRVFDVQY RNIKGTYDVR
401: SAPIHFACSD TVACTNITMS EVELLPEEGE LVDDPFCWNA YGTQETLTIP PIDCLLDGSP VVEEGYNSNP GC
Best Arabidopsis Sequence Match ( AT1G48100.1 )
(BLAST)
001: MRRLSGILVI YIISTVLFGH FTNVARARYH YHKGRHGVTH PLPPPPPPPL ETANPPDQVP SDPYPSPDPA PGDSDSGCVF DVTSFGAVGD GSCDDTAAFQ
101: DAWKAACAVE SGVVLAPEGG VFKITSTIFS GPCKPGLVFQ LDGVLMPPDG PEEWPEKDNK NQWLVFYRLD GFTFSGKGTV EGNGQKWWDL PCKPHRGPDG
201: SSSSGPCASP TMIRFFMSNN IEVKGLRIQN SPQFHMKFDG CQGVLINEIQ ISSPKLSPNT DGIHLGNTRS VGIYNSVVSN GDDCISIGTG CSDVDIQGVT
301: CGPSHGISIG SLGVHNSQAC VSNITVRNTV IRDSDNGLRV KTWQGGTGSV SNLLFENIQM ENVLNCIIVD QYYCQSKDCR NETSAVKVFD VEYRNIKGTY
401: DVRSPPIHFA CSDTVACTNI TMSEVELLPE EGELVDDPFC WNAYGKQETL TIPPIDCLLD GSPVVEEAYD SNYGC
Arabidopsis Description
Polygalacturonase At1g48100 [Source:UniProtKB/Swiss-Prot;Acc:Q949Z1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.