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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • extracellular 6
  • golgi 4
  • plasma membrane 4
  • endoplasmic reticulum 4
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032600.1-P Field mustard extracellular 98.37 98.37
CDX89966 Canola extracellular 93.89 93.89
CDY15246 Canola extracellular 93.48 93.48
CDY67535 Canola extracellular 58.25 91.96
AT1G02460.1 Thale cress extracellular 90.22 90.22
KRG96576 Soybean extracellular 62.73 66.67
KRH68311 Soybean extracellular 62.73 66.67
PGSC0003DMT400013344 Potato extracellular 63.95 66.53
KRH69173 Soybean extracellular 63.95 66.38
KRH31755 Soybean extracellular 63.95 66.11
Solyc01g079130.1.1 Tomato extracellular 63.54 66.1
VIT_07s0005g02090.t01 Wine grape extracellular 61.71 65.16
CDY71357 Canola extracellular, vacuole 40.73 63.09
Os01t0296200-00 Rice extracellular 33.2 61.28
GSMUA_Achr11P... Banana extracellular 52.55 59.17
CDY41695 Canola extracellular 50.51 57.01
HORVU1Hr1G067840.1 Barley extracellular, plastid 53.97 55.67
CDX95284 Canola extracellular 45.62 55.45
TraesCS1A01G311100.1 Wheat extracellular 54.58 55.37
TraesCS1D01G311000.1 Wheat extracellular 53.97 55.32
TraesCS1B01G322500.1 Wheat extracellular 54.18 54.96
GSMUA_Achr9P16670_001 Banana extracellular, plasma membrane 54.99 53.89
CDY43307 Canola extracellular 51.73 53.7
CDX93644 Canola extracellular 51.53 53.6
Zm00001d040589_P001 Maize extracellular 52.34 51.5
EES00620 Sorghum extracellular 51.93 50.4
Zm00001d009057_P001 Maize extracellular 42.16 48.94
GSMUA_Achr3P08400_001 Banana extracellular 54.38 47.51
CDY09873 Canola extracellular 37.88 42.37
CDX69569 Canola extracellular 37.88 42.37
CDY11585 Canola extracellular 36.66 38.54
CDY13645 Canola extracellular 36.86 38.51
CDY47139 Canola extracellular 36.46 38.33
CDY54312 Canola extracellular 34.62 38.29
CDX83631 Canola extracellular 36.66 38.22
CDY54292 Canola cytosol 34.62 38.12
CDY54228 Canola extracellular, golgi, vacuole 40.94 38.07
CDY57689 Canola extracellular 34.62 38.03
CDY04708 Canola plastid 21.38 37.91
CDX67693 Canola extracellular 33.4 37.88
CDY20612 Canola extracellular 40.94 37.85
CDY25786 Canola cytosol 34.22 37.67
CDY20962 Canola extracellular, golgi, vacuole 40.73 37.66
CDX72025 Canola extracellular 32.99 37.5
CDX93397 Canola extracellular, golgi, vacuole 40.53 37.34
CDY34877 Canola extracellular, golgi 37.07 37.22
CDY37962 Canola extracellular, golgi, vacuole 40.33 37.22
CDY56952 Canola extracellular 31.77 37.05
CDY37571 Canola cytosol 28.11 36.9
CDY48768 Canola extracellular 32.59 36.78
CDX74418 Canola extracellular 31.57 36.73
CDY38648 Canola cytosol 27.9 36.63
CDY50367 Canola extracellular, golgi 39.92 36.57
CDY47212 Canola extracellular 39.92 36.57
CDX79907 Canola extracellular 32.38 36.55
CDY06902 Canola extracellular 31.98 36.26
CDY14791 Canola extracellular 31.98 36.26
CDY50769 Canola extracellular 24.44 35.09
CDX73440 Canola extracellular 28.51 35.0
CDY69377 Canola extracellular 28.51 35.0
CDY39399 Canola extracellular 28.31 34.75
CDY07963 Canola extracellular 30.96 34.7
CDY39404 Canola extracellular 28.11 34.59
CDY35976 Canola extracellular 29.53 34.44
CDX74019 Canola extracellular 30.55 34.32
CDY44150 Canola extracellular, golgi, plastid 35.03 34.26
CDY47032 Canola extracellular 28.11 34.24
CDY28005 Canola extracellular 29.33 34.2
CDX72553 Canola extracellular 27.9 33.99
CDX85471 Canola extracellular 27.29 33.0
CDY30105 Canola extracellular 30.14 32.96
CDX97703 Canola extracellular 30.14 32.74
CDX75843 Canola extracellular 30.14 32.67
CDY58462 Canola extracellular 29.94 32.45
CDX97704 Canola extracellular 29.94 32.24
CDY30107 Canola extracellular 29.74 32.02
CDY16952 Canola extracellular 28.11 31.8
CDY02729 Canola extracellular 27.49 31.54
CDX75239 Canola cytosol 26.07 31.53
CDX68839 Canola cytosol 26.07 31.53
CDY41445 Canola endoplasmic reticulum 35.03 30.94
CDX69397 Canola extracellular 25.25 30.69
CDY61868 Canola extracellular 33.2 29.69
CDY39884 Canola extracellular 25.25 27.87
CDY06100 Canola extracellular 22.4 25.76
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078CP94EnsemblPlants:CDX77909ProteinID:CDX77909ProteinID:CDX77909.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00129144001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31375PANTHER:PTHR31375:SF43InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EE0652SEG:seg
Description
BnaC03g53100D
Coordinates
chrLK031813:+:1989881..1992624
Molecular Weight (calculated)
53228.5 Da
IEP (calculated)
6.186
GRAVY (calculated)
-0.265
Length
491 amino acids
Sequence
(BLAST)
001: MLISSYTRNQ ILCFIALIIT LTSLTESRYH HHKEKHKHNS HNHHSSKPEP PSSSISQPPT PPPGPDDSPS PSLPPSPSDD PEEDNNGVYD VRKFGAVGDG
101: AADDTEAFKT AWDSSCSNGN DTVSVLLVPY GYTFMIQSTI FTGPCHSYQL FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGAG VIDGRGQKWW
201: DLPCKPHRTV NKSAIVAGPC DSPIALRFFM SSNLTVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSV ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SHACVSNITV RDSVIKYSNN GVRIKTWQGG FGSVSGVTFN NIHVESVRNP IIIDQYYCMT KDCSNKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSGIE LLPEKGEIVV DPFCWNAYGI VEELSIPPVW CLMSDPPTAL QGALVNKCGS P
Best Arabidopsis Sequence Match ( AT1G02460.1 )
(BLAST)
001: MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG
101: ETDDTEAFKT AWDSSCNNEN NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGEG VIDGRGQKWW
201: DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL QGSLVDKCGS S
Arabidopsis Description
At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.