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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • plastid 2
  • extracellular 5
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:nucleus, plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:plastid
WoLF PSORT:nucleus
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1B01G322500.1 Wheat extracellular 98.75 97.73
TraesCS1A01G311100.1 Wheat extracellular 98.75 97.73
HORVU1Hr1G067840.1 Barley extracellular, plastid 94.99 95.59
Os01t0296200-00 Rice extracellular 47.18 84.96
Zm00001d040589_P001 Maize extracellular 80.58 77.35
Zm00001d009057_P001 Maize extracellular 67.01 75.89
EES00620 Sorghum extracellular 79.33 75.1
GSMUA_Achr11P... Banana extracellular 56.16 61.7
CDY67535 Canola extracellular 39.04 60.13
GSMUA_Achr9P16670_001 Banana extracellular, plasma membrane 61.8 59.08
KRH69173 Soybean extracellular 57.62 58.35
KRH31755 Soybean extracellular 57.83 58.32
PGSC0003DMT400007095 Potato cytosol 51.98 57.24
KRG96576 Soybean extracellular 54.28 56.28
KRH68311 Soybean extracellular 53.86 55.84
VIT_14s0060g00620.t01 Wine grape extracellular 53.65 55.39
VIT_07s0005g02090.t01 Wine grape extracellular 53.44 55.05
Bra032600.1-P Field mustard extracellular 55.95 54.58
PGSC0003DMT400013344 Potato extracellular 53.65 54.45
CDX89966 Canola extracellular 55.74 54.38
Bra033328.1-P Field mustard extracellular 55.53 54.18
CDY15246 Canola extracellular 55.53 54.18
CDX77909 Canola extracellular 55.32 53.97
Solyc01g100980.2.1 Tomato extracellular 53.44 53.78
AT1G02460.1 Thale cress extracellular 55.11 53.77
Solyc01g079130.1.1 Tomato extracellular 52.82 53.6
KRG96690 Soybean extracellular 50.94 53.16
AT4G01890.1 Thale cress extracellular 50.94 52.25
GSMUA_Achr3P08400_001 Banana extracellular 60.54 51.6
TraesCS7D01G326800.1 Wheat extracellular 51.77 50.82
Bra000911.1-P Field mustard extracellular, vacuole 51.36 50.62
CDY71357 Canola extracellular, vacuole 30.27 45.74
TraesCS1D01G129600.2 Wheat cytosol, extracellular, nucleus 27.14 40.12
TraesCS7D01G164200.1 Wheat extracellular 33.82 38.57
TraesCS1D01G370300.3 Wheat extracellular 32.36 37.71
TraesCS1D01G425600.1 Wheat extracellular 41.13 37.38
TraesCS2D01G402100.1 Wheat extracellular 31.11 36.79
TraesCS2D01G402200.1 Wheat extracellular 29.85 36.57
TraesCS5D01G470100.1 Wheat extracellular 31.11 36.34
TraesCS3D01G223900.1 Wheat extracellular 40.29 36.01
TraesCS4D01G243600.1 Wheat extracellular 32.15 35.57
TraesCS5D01G470200.1 Wheat extracellular 30.9 35.32
TraesCS1D01G066400.1 Wheat cytosol 27.97 35.17
TraesCS3D01G130300.1 Wheat extracellular 29.44 35.16
TraesCS2D01G402000.1 Wheat extracellular 30.9 34.58
TraesCS3D01G130400.1 Wheat extracellular 29.65 34.47
TraesCS1D01G370700.1 Wheat extracellular 29.85 34.13
TraesCS1D01G370800.1 Wheat extracellular 30.69 33.87
TraesCS2D01G402300.1 Wheat extracellular 22.96 33.03
TraesCS3D01G021700.1 Wheat extracellular 29.85 32.43
TraesCS1D01G066300.1 Wheat extracellular, golgi 32.78 31.46
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF99InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixEnsemblPlantsGene:TraesCS1D01G311000EnsemblPlants:TraesCS1D01G311000.1
SEG:seg:::::
Description
No Description!
Coordinates
chr1D:-:407160043..407161685
Molecular Weight (calculated)
50645.5 Da
IEP (calculated)
6.540
GRAVY (calculated)
-0.184
Length
479 amino acids
Sequence
(BLAST)
001: MEARNAIALL LALVVAASFL CDGVHSRHHH HTKRHSVRPP SHAPGPSGPR RAPSPRHSSP SAPPPARTPP SAPPMPGPSD DGDNVYDVIK DFGAVGDGVT
101: DDTDAIKTAW DTACQDDGEG VVLAAAGHSF LVHTTTFTGP CQGSVTLQID GTIVAPSEPT TWPANSKRNW LVFYKADGMA LRGSGLIDGK GQKWWDLPCK
201: PHKGGSTHGP CDSPVALRFF MSNNVTVQGL RVQDSPEFHF RFDSCRGVHV DSLSISSPAL SPNTDGIHVE NTQDVLITNT VVSNGDDCVS IGAGTLNVHI
301: ENVTCGPGHG ISIGSLGKQG SRACVANITV RNAVIRHSDN GVRIKTWQGG SGSVSAVTFE NVRMDAVRNP IIIDQYYCLT KSCENATTAV FVSDITYAGI
401: RGTYDVRGPP IHFGCSDAVP CTNITLSGVE LLPASGDTVD SPFCWNVYGN TTTPIVPPVA CLIEGVPRNV DDTSSLKCY
Best Arabidopsis Sequence Match ( AT1G02460.1 )
(BLAST)
001: MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG
101: ETDDTEAFKT AWDSSCNNEN NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGEG VIDGRGQKWW
201: DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL QGSLVDKCGS S
Arabidopsis Description
At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.