Factsheet for TraesCS7D01G164200.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G067800.1	Wheat	extracellular	96.19	96.19
TraesCS7A01G162500.1	Wheat	extracellular	95.71	95.71
HORVU7Hr1G034150.1	Barley	extracellular	89.29	90.58
TraesCS1D01G129600.2	Wheat	cytosol, extracellular, nucleus	68.81	89.2
TraesCS5D01G470200.1	Wheat	extracellular	60.71	60.86
TraesCS5D01G470100.1	Wheat	extracellular	59.29	60.73
TraesCS1D01G066400.1	Wheat	cytosol	47.14	51.97
TraesCS1D01G066300.1	Wheat	extracellular, golgi	55.48	46.69
TraesCS4D01G243600.1	Wheat	extracellular	45.24	43.88
TraesCS1D01G370300.3	Wheat	extracellular	40.24	41.12
TraesCS2D01G402100.1	Wheat	extracellular	39.52	40.99
TraesCS2D01G402200.1	Wheat	extracellular	36.9	39.64
TraesCS2D01G402300.1	Wheat	extracellular	30.95	39.04
TraesCS3D01G130400.1	Wheat	extracellular	37.62	38.35
TraesCS3D01G130300.1	Wheat	extracellular	35.71	37.41
TraesCS2D01G402000.1	Wheat	extracellular	38.1	37.38
TraesCS1D01G370700.1	Wheat	extracellular	34.29	34.37
TraesCS1D01G311000.1	Wheat	extracellular	38.57	33.82
TraesCS1D01G370800.1	Wheat	extracellular	33.81	32.72
TraesCS7D01G326800.1	Wheat	extracellular	37.86	32.58
TraesCS3D01G021700.1	Wheat	extracellular	33.33	31.75
TraesCS3D01G223900.1	Wheat	extracellular	37.86	29.66
TraesCS1D01G425600.1	Wheat	extracellular	36.19	28.84

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295
ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF39	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS7D01G164200	EnsemblPlants:TraesCS7D01G164200.1	SEG:seg

Description

No Description!

Coordinates

chr7D:-:113446360..113448164

Molecular Weight (calculated)

45392.6 Da

IEP (calculated)

8.852

GRAVY (calculated)

-0.182

Length

420 amino acids

Sequence
(BLAST)

001: MASIVPLFSL LSLFLCCALA KGGMKMAPST NGADHRGRSL QSDHVFSVLT YGAYGDGRHG DTKALSKAWA AACSSLNPSI MLIPGGKKYL TKHLTFSGPC
101: KSSITLMIEG TLVAPPKRLY WIEDTIRHWI LFRSVRGLTV TGGGTIDGNG KIWWQNSCKV NSKLPCRQAP TALTFYSCTN LEVNNLELLN SQQIHISVEH
201: CSDVRMSRLS ITAPGTSPNT DGIHIAHSKD VKVMDCAIKT GDDCMSIEDG TENLHVNNIV CGPGHGISIG SLGDRNSQAQ VANITIDGAR LRGTTNGARI
301: KTWQGGWGYA KNIVFQNMMM DNVQNPIIID QNYCDSATPC NEQKSAVEVS NVLFKNIRGT SASREAIKLS CSRAVPCHGI ALHNVRLTLK RGGGDAKSTC
401: ENAKWRKLGT VMPQPCSLND

Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)

001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S

Arabidopsis Description

ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.