Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7B01G067800.1 | Wheat | extracellular | 96.9 | 96.9 |
TraesCS7D01G164200.1 | Wheat | extracellular | 95.71 | 95.71 |
HORVU7Hr1G034150.1 | Barley | extracellular | 90.24 | 91.55 |
TraesCS1A01G124300.1 | Wheat | extracellular, plastid | 88.33 | 85.68 |
TraesCS5A01G459100.1 | Wheat | extracellular | 60.95 | 61.54 |
TraesCS5A01G459000.1 | Wheat | extracellular | 59.05 | 60.64 |
TraesCS4A01G066700.1 | Wheat | extracellular | 45.24 | 43.88 |
TraesCS1A01G364800.2 | Wheat | extracellular | 40.0 | 40.58 |
TraesCS2A01G405600.1 | Wheat | extracellular | 30.71 | 40.44 |
TraesCS2A01G405300.1 | Wheat | extracellular, nucleus | 38.57 | 40.0 |
TraesCS3A01G129500.1 | Wheat | extracellular | 38.33 | 39.56 |
TraesCS2A01G405100.1 | Wheat | extracellular | 39.05 | 39.33 |
TraesCS3A01G129400.1 | Wheat | extracellular | 36.9 | 37.8 |
TraesCS1A01G311100.1 | Wheat | extracellular | 38.81 | 33.68 |
TraesCS6A01G084500.1 | Wheat | extracellular, golgi, vacuole | 41.67 | 33.33 |
TraesCS7A01G330000.1 | Wheat | extracellular | 38.1 | 32.79 |
TraesCS1A01G365300.1 | Wheat | extracellular | 33.33 | 32.18 |
TraesCS3A01G024500.1 | Wheat | extracellular | 33.81 | 32.13 |
TraesCS1A01G365200.1 | Wheat | extracellular | 35.0 | 32.03 |
TraesCS1A01G418000.1 | Wheat | extracellular | 37.62 | 30.98 |
TraesCS3A01G225800.2 | Wheat | extracellular | 38.33 | 29.87 |
Protein Annotations
Gene3D:2.160.20.10 | MapMan:21.3.5.1.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005975 |
GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_28 | InterPro:IPR012334 | PFAM:PF00295 |
ScanProsite:PS00502 | PANTHER:PTHR31375 | PANTHER:PTHR31375:SF39 | InterPro:PbH1 | InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence |
SMART:SM00710 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | EnsemblPlantsGene:TraesCS7A01G162500 | EnsemblPlants:TraesCS7A01G162500.1 | SEG:seg |
Description
No Description!
Coordinates
chr7A:-:118462549..118464330
Molecular Weight (calculated)
45308.4 Da
IEP (calculated)
8.581
GRAVY (calculated)
-0.177
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: MASIVPLFSL LSLFLCCVLA KGGMKVAPSA NGADHRGRSL QSNHVFSVLG YGAYGDGRHD DTKALSKAWA AACSSLNPSI VLIPGGKKYL TKHLTFSGPC
101: KSSITLMIEG TLVAPPKRSY WIEDTIRHWI LFRSVRGLTV TGGGTIDGNG KIWWQDSCKI NSKLPCRQAP TALTFYSCTN LRVDNLELLN SQQIHISVEH
201: CSDVRMSHLS ITAPGTSPNT DGIHIAHSKD VKVMDCAIKT GDDCMSIEDG TENLHVNNIV CGPGHGISIG SLGDRNSQAQ VANITIDGAR LRGTTNGARI
301: KTWQGGRGYA KNIVFQNMMM DNVQNPIIID QNYCDSATPC NEQKSAVEVS NVLFNNIRGT SASREAIKLS CSRVVPCHGI ALHNVRLTLK RGGGDAESSC
401: ENAKWRKLGT VMPQPCSLND
101: KSSITLMIEG TLVAPPKRSY WIEDTIRHWI LFRSVRGLTV TGGGTIDGNG KIWWQDSCKI NSKLPCRQAP TALTFYSCTN LRVDNLELLN SQQIHISVEH
201: CSDVRMSHLS ITAPGTSPNT DGIHIAHSKD VKVMDCAIKT GDDCMSIEDG TENLHVNNIV CGPGHGISIG SLGDRNSQAQ VANITIDGAR LRGTTNGARI
301: KTWQGGRGYA KNIVFQNMMM DNVQNPIIID QNYCDSATPC NEQKSAVEVS NVLFNNIRGT SASREAIKLS CSRVVPCHGI ALHNVRLTLK RGGGDAESSC
401: ENAKWRKLGT VMPQPCSLND
001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S
Arabidopsis Description
ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.