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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G067800.1 Wheat extracellular 96.9 96.9
TraesCS7D01G164200.1 Wheat extracellular 95.71 95.71
HORVU7Hr1G034150.1 Barley extracellular 90.24 91.55
TraesCS1A01G124300.1 Wheat extracellular, plastid 88.33 85.68
TraesCS5A01G459100.1 Wheat extracellular 60.95 61.54
TraesCS5A01G459000.1 Wheat extracellular 59.05 60.64
TraesCS4A01G066700.1 Wheat extracellular 45.24 43.88
TraesCS1A01G364800.2 Wheat extracellular 40.0 40.58
TraesCS2A01G405600.1 Wheat extracellular 30.71 40.44
TraesCS2A01G405300.1 Wheat extracellular, nucleus 38.57 40.0
TraesCS3A01G129500.1 Wheat extracellular 38.33 39.56
TraesCS2A01G405100.1 Wheat extracellular 39.05 39.33
TraesCS3A01G129400.1 Wheat extracellular 36.9 37.8
TraesCS1A01G311100.1 Wheat extracellular 38.81 33.68
TraesCS6A01G084500.1 Wheat extracellular, golgi, vacuole 41.67 33.33
TraesCS7A01G330000.1 Wheat extracellular 38.1 32.79
TraesCS1A01G365300.1 Wheat extracellular 33.33 32.18
TraesCS3A01G024500.1 Wheat extracellular 33.81 32.13
TraesCS1A01G365200.1 Wheat extracellular 35.0 32.03
TraesCS1A01G418000.1 Wheat extracellular 37.62 30.98
TraesCS3A01G225800.2 Wheat extracellular 38.33 29.87
Protein Annotations
Gene3D:2.160.20.10MapMan:21.3.5.1.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF39InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMEnsemblPlantsGene:TraesCS7A01G162500EnsemblPlants:TraesCS7A01G162500.1SEG:seg
Description
No Description!
Coordinates
chr7A:-:118462549..118464330
Molecular Weight (calculated)
45308.4 Da
IEP (calculated)
8.581
GRAVY (calculated)
-0.177
Length
420 amino acids
Sequence
(BLAST)
001: MASIVPLFSL LSLFLCCVLA KGGMKVAPSA NGADHRGRSL QSNHVFSVLG YGAYGDGRHD DTKALSKAWA AACSSLNPSI VLIPGGKKYL TKHLTFSGPC
101: KSSITLMIEG TLVAPPKRSY WIEDTIRHWI LFRSVRGLTV TGGGTIDGNG KIWWQDSCKI NSKLPCRQAP TALTFYSCTN LRVDNLELLN SQQIHISVEH
201: CSDVRMSHLS ITAPGTSPNT DGIHIAHSKD VKVMDCAIKT GDDCMSIEDG TENLHVNNIV CGPGHGISIG SLGDRNSQAQ VANITIDGAR LRGTTNGARI
301: KTWQGGRGYA KNIVFQNMMM DNVQNPIIID QNYCDSATPC NEQKSAVEVS NVLFNNIRGT SASREAIKLS CSRVVPCHGI ALHNVRLTLK RGGGDAESSC
401: ENAKWRKLGT VMPQPCSLND
Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)
001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S
Arabidopsis Description
ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.