Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G402300.1 | Wheat | extracellular | 94.67 | 90.69 |
| TraesCS2A01G405300.1 | Wheat | extracellular, nucleus | 80.88 | 63.7 |
| HORVU2Hr1G096130.1 | Barley | extracellular | 78.06 | 61.48 |
| TraesCS2A01G405100.1 | Wheat | extracellular | 75.86 | 58.03 |
| KXG26899 | Sorghum | extracellular | 57.68 | 43.81 |
| KRH14715 | Soybean | cytosol, extracellular, nucleus, plastid | 38.24 | 35.16 |
| KRH23786 | Soybean | cytosol, extracellular, nucleus, plastid | 38.24 | 33.89 |
| KRH05150 | Soybean | extracellular | 27.9 | 33.09 |
| GSMUA_Achr11P... | Banana | extracellular | 42.95 | 32.93 |
| AT4G35670.1 | Thale cress | extracellular | 38.87 | 31.47 |
| TraesCS5A01G459000.1 | Wheat | extracellular | 40.13 | 31.3 |
| CDX73440 | Canola | extracellular | 39.19 | 31.25 |
| VIT_09s0002g06650.t01 | Wine grape | extracellular | 39.5 | 31.19 |
| KRG88958 | Soybean | extracellular | 34.48 | 30.99 |
| AT5G44840.1 | Thale cress | extracellular | 37.93 | 30.95 |
| AT5G44830.1 | Thale cress | extracellular | 31.97 | 30.72 |
| TraesCS7A01G162500.1 | Wheat | extracellular | 40.44 | 30.71 |
| CDY50769 | Canola | extracellular | 32.92 | 30.7 |
| CDY39404 | Canola | extracellular | 38.24 | 30.58 |
| TraesCS5A01G459100.1 | Wheat | extracellular | 39.81 | 30.53 |
| CDY69377 | Canola | extracellular | 38.24 | 30.5 |
| CDY39399 | Canola | extracellular | 38.24 | 30.5 |
| Bra025103.1-P | Field mustard | extracellular | 38.24 | 30.5 |
| Bra025099.1-P | Field mustard | extracellular | 38.24 | 30.5 |
| VIT_09s0002g06610.t01 | Wine grape | extracellular | 36.99 | 30.33 |
| Solyc08g060970.2.1 | Tomato | nucleus | 37.62 | 30.23 |
| TraesCS3A01G129500.1 | Wheat | extracellular | 38.24 | 29.98 |
| VIT_09s0096g00850.t01 | Wine grape | cytoskeleton, cytosol, peroxisome | 34.8 | 29.92 |
| PGSC0003DMT400056828 | Potato | extracellular | 37.3 | 29.9 |
| PGSC0003DMT400008955 | Potato | extracellular | 32.29 | 29.6 |
| CDY47032 | Canola | extracellular | 37.3 | 29.53 |
| TraesCS3A01G129400.1 | Wheat | extracellular | 37.93 | 29.51 |
| KRH23567 | Soybean | extracellular | 36.99 | 29.43 |
| VIT_09s0002g06580.t01 | Wine grape | cytosol | 36.05 | 29.41 |
| KRH66276 | Soybean | extracellular | 32.6 | 29.3 |
| CDX72553 | Canola | extracellular | 36.99 | 29.28 |
| AT5G17200.1 | Thale cress | extracellular | 38.56 | 29.22 |
| CDX85471 | Canola | extracellular | 36.68 | 28.82 |
| KRH66273 | Soybean | extracellular | 27.59 | 28.39 |
| CDY02729 | Canola | extracellular | 37.93 | 28.27 |
| TraesCS1A01G124300.1 | Wheat | extracellular, plastid | 38.24 | 28.18 |
| KRH09740 | Soybean | extracellular | 37.3 | 28.0 |
| Solyc03g116580.2.1 | Tomato | extracellular | 38.24 | 27.92 |
| TraesCS4A01G066700.1 | Wheat | extracellular | 37.62 | 27.71 |
| Bra023600.1-P | Field mustard | extracellular | 36.99 | 27.57 |
| TraesCS1A01G364800.2 | Wheat | extracellular | 35.74 | 27.54 |
| KRH66305 | Soybean | extracellular | 33.23 | 27.53 |
| AT4G32370.1 | Thale cress | extracellular | 29.47 | 27.49 |
| Bra008572.1-P | Field mustard | extracellular | 37.3 | 27.42 |
| CDY16952 | Canola | extracellular | 36.99 | 27.19 |
| Bra011341.1-P | Field mustard | cytosol | 32.6 | 26.46 |
| Bra001605.1-P | Field mustard | extracellular | 37.3 | 26.33 |
| CDX75843 | Canola | extracellular | 37.3 | 26.27 |
| CDY30105 | Canola | extracellular | 36.68 | 26.06 |
| CDX69397 | Canola | extracellular | 32.92 | 25.99 |
| AT5G27530.1 | Thale cress | cytosol | 37.3 | 25.98 |
| KRH48978 | Soybean | extracellular | 24.14 | 25.84 |
| CDY58462 | Canola | extracellular | 36.68 | 25.83 |
| Bra027211.1-P | Field mustard | extracellular | 36.36 | 25.72 |
| CDX97703 | Canola | extracellular | 36.36 | 25.66 |
| CDX75239 | Canola | cytosol | 32.6 | 25.62 |
| CDX68839 | Canola | cytosol | 32.29 | 25.37 |
| AT3G15720.1 | Thale cress | extracellular | 36.05 | 25.22 |
| CDY30107 | Canola | extracellular | 36.05 | 25.22 |
| CDX97704 | Canola | extracellular | 36.05 | 25.22 |
| TraesCS3A01G024500.1 | Wheat | extracellular | 34.8 | 25.11 |
| Bra027210.1-P | Field mustard | extracellular | 35.74 | 25.0 |
| TraesCS1A01G365200.1 | Wheat | extracellular | 35.74 | 24.84 |
| TraesCS1A01G365300.1 | Wheat | extracellular | 33.86 | 24.83 |
| Bra040077.1-P | Field mustard | extracellular | 27.27 | 23.84 |
| CDY39884 | Canola | extracellular | 33.23 | 23.82 |
| TraesCS6A01G084500.1 | Wheat | extracellular, golgi, vacuole | 38.56 | 23.43 |
| TraesCS1A01G418000.1 | Wheat | extracellular | 36.36 | 22.75 |
| TraesCS1A01G311100.1 | Wheat | extracellular | 34.48 | 22.73 |
| AT4G32380.1 | Thale cress | extracellular | 31.97 | 22.52 |
| TraesCS3A01G225800.2 | Wheat | extracellular | 37.62 | 22.26 |
| TraesCS7A01G330000.1 | Wheat | extracellular | 33.54 | 21.93 |
| AT4G32375.1 | Thale cress | extracellular | 21.63 | 16.31 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G405600.1 | EnsemblPlantsGene:TraesCS2A01G405600 | Gene3D:2.160.20.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004650 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_28 | InterPro:IPR012334 |
| InterPro:Pectin_lyas_fold | InterPro:Pectin_lyase_fold/virulence | PANTHER:PTHR31375 | PANTHER:PTHR31375:SF45 | PFAM:PF00295 | SEG:seg |
| SignalP:SignalP-noTM | SUPFAM:SSF51126 | MapMan:50.3.2 | : | : | : |
Description
No Description!
Coordinates
chr2A:+:661446724..661448975
Molecular Weight (calculated)
33767.0 Da
IEP (calculated)
8.788
GRAVY (calculated)
-0.037
Length
319 amino acids
Sequence
(BLAST)
(BLAST)
001: MGIIGIRTAT LLLAALAWRS VLVAAAGEAD GVFNVKDYGA RGDGTTDDTK AFIDAWSAAC GARGSSASLL VPAGKSFLVG PARFSGPCAS TRITVQVMGT
101: ITAPPPGAWS GQKYWMMFYQ VQGLTVTGGS TGLLDGRGRS WWWSDQCNRY GDIYKAPTAL VVMNCTDVEL SKFSSKNSSQ MHIAVSQSSK VHLTQLTTTA
201: PWDSPNTDGV HIDQSEDVRV TRSTMGTSGE CVSIGPGSRF VTVDGIVCGP GRAVSVGSLG KKGATESVEY IDVKNVHFIN TLSGARIKTW QGGKGYARSI
301: SFTNINFTNV DNPVVINQF
101: ITAPPPGAWS GQKYWMMFYQ VQGLTVTGGS TGLLDGRGRS WWWSDQCNRY GDIYKAPTAL VVMNCTDVEL SKFSSKNSSQ MHIAVSQSSK VHLTQLTTTA
201: PWDSPNTDGV HIDQSEDVRV TRSTMGTSGE CVSIGPGSRF VTVDGIVCGP GRAVSVGSLG KKGATESVEY IDVKNVHFIN TLSGARIKTW QGGKGYARSI
301: SFTNINFTNV DNPVVINQF
001: MKKTWFLNFS LFFLQIFTSS NALDVTQFGA VGDGVTDDSQ AFLKAWEAVC SGTGDGQFVV PAGMTFMLQP LKFQGSCKST PVFVQMLGKL VAPSKGNWKG
101: DKDQWILFTD IEGLVIEGDG EINGQGSSWW EHKGSRPTAL KFRSCNNLRL SGLTHLDSPM AHIHISECNY VTISSLRINA PESSPNTDGI DVGASSNVVI
201: QDCIIATGDD CIAINSGTSN IHISGIDCGP GHGISIGSLG KDGETATVEN VCVQNCNFRG TMNGARIKTW QGGSGYARMI TFNGITLDNV ENPIIIDQFY
301: NGGDSDNAKD RKSSAVEVSK VVFSNFIGTS KSEYGVDFRC SERVPCTEIF LRDMKIETAS SGSGQVAQGQ CLNVRGASTI AVPGLECLEL STDMFSSAQL
401: LEQTCMSAQS VQPRTTTQPM QDPIWVFQSR GKQLRVYNIA ILVSFISLVT YILAR
101: DKDQWILFTD IEGLVIEGDG EINGQGSSWW EHKGSRPTAL KFRSCNNLRL SGLTHLDSPM AHIHISECNY VTISSLRINA PESSPNTDGI DVGASSNVVI
201: QDCIIATGDD CIAINSGTSN IHISGIDCGP GHGISIGSLG KDGETATVEN VCVQNCNFRG TMNGARIKTW QGGSGYARMI TFNGITLDNV ENPIIIDQFY
301: NGGDSDNAKD RKSSAVEVSK VVFSNFIGTS KSEYGVDFRC SERVPCTEIF LRDMKIETAS SGSGQVAQGQ CLNVRGASTI AVPGLECLEL STDMFSSAQL
401: LEQTCMSAQS VQPRTTTQPM QDPIWVFQSR GKQLRVYNIA ILVSFISLVT YILAR
Arabidopsis Description
Probable polygalacturonase At3g15720 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW07]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.