CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G423400.1	Wheat	plastid	51.67	61.82
TraesCS2D01G402200.1	Wheat	extracellular	56.9	61.13
TraesCS2A01G405300.1	Wheat	extracellular, nucleus	58.81	60.99
HORVU2Hr1G096130.1	Barley	extracellular	58.33	60.49
TraesCS2B01G423300.1	Wheat	extracellular	57.62	60.35
TraesCS2D01G402100.1	Wheat	extracellular	57.38	59.51
TraesCS2A01G405100.1	Wheat	extracellular	58.81	59.23
TraesCS2B01G423200.1	Wheat	extracellular	58.57	57.88
TraesCS2A01G405600.1	Wheat	extracellular	43.81	57.68
TraesCS2D01G402000.1	Wheat	extracellular	58.33	57.24
TraesCS2D01G402300.1	Wheat	extracellular	44.29	55.86
KRH14715	Soybean	cytosol, extracellular, nucleus, plastid	35.48	42.94
KRH23786	Soybean	cytosol, extracellular, nucleus, plastid	36.67	42.78
GSMUA_Achr11P...	Banana	extracellular	41.43	41.83
CDY50769	Canola	extracellular	33.1	40.64
KRH48978	Soybean	extracellular	28.57	40.27
VIT_09s0096g00850.t01	Wine grape	cytoskeleton, cytosol, peroxisome	35.48	40.16
KRG88958	Soybean	extracellular	33.81	40.0
AT5G44830.1	Thale cress	extracellular	31.43	39.76
CDY69377	Canola	extracellular	37.86	39.75
CDY39404	Canola	extracellular	37.62	39.6
AT4G35670.1	Thale cress	extracellular	37.14	39.59
Bra025099.1-P	Field mustard	extracellular	37.62	39.5
CDX73440	Canola	extracellular	37.62	39.5
CDY39399	Canola	extracellular	37.38	39.25
Bra025103.1-P	Field mustard	extracellular	37.38	39.25
CDY47032	Canola	extracellular	37.38	38.96
VIT_09s0002g06610.t01	Wine grape	extracellular	35.95	38.82
AT5G44840.1	Thale cress	extracellular	35.95	38.62
CDX72553	Canola	extracellular	36.9	38.46
KRH23567	Soybean	extracellular	36.67	38.4
Solyc08g060970.2.1	Tomato	nucleus	35.95	38.04
PGSC0003DMT400056828	Potato	extracellular	35.95	37.94
KRH66273	Soybean	extracellular	27.86	37.74
KXG39856	Sorghum	extracellular	38.57	37.67
PGSC0003DMT400008955	Potato	extracellular	31.19	37.64
VIT_09s0002g06650.t01	Wine grape	extracellular	36.19	37.62
CDY58462	Canola	extracellular	40.0	37.09
CDX75843	Canola	extracellular	40.0	37.09
Bra001605.1-P	Field mustard	extracellular	39.76	36.95
CDX85471	Canola	extracellular	35.71	36.95
KRH66276	Soybean	extracellular	31.19	36.9
VIT_09s0002g06580.t01	Wine grape	cytosol	34.05	36.57
KRH05150	Soybean	extracellular	23.33	36.43
KRH09740	Soybean	extracellular	36.67	36.24
AT3G15720.1	Thale cress	extracellular	39.29	36.18
Bra008572.1-P	Field mustard	extracellular	36.9	35.71
EER93240	Sorghum	extracellular	38.33	35.62
CDX97704	Canola	extracellular	38.57	35.53
CDY30107	Canola	extracellular	38.57	35.53
CDY16952	Canola	extracellular	36.67	35.48
Solyc03g116580.2.1	Tomato	extracellular	36.9	35.47
CDY30105	Canola	extracellular	37.86	35.41
CDX97703	Canola	extracellular	38.1	35.4
EER90686	Sorghum	plastid	36.67	35.32
Bra027210.1-P	Field mustard	extracellular	38.33	35.31
Bra023600.1-P	Field mustard	extracellular	35.95	35.28
KRH66305	Soybean	extracellular	32.14	35.06
Bra027211.1-P	Field mustard	extracellular	37.62	35.03
AT5G17200.1	Thale cress	extracellular	35.0	34.92
CDY02729	Canola	extracellular	35.48	34.81
EES18597	Sorghum	extracellular	33.81	34.8
CDX69397	Canola	extracellular	33.33	34.65
EER90681	Sorghum	extracellular	36.9	33.19
AT5G27530.1	Thale cress	cytosol	35.95	32.97
KXG31745	Sorghum	extracellular	33.81	32.95
Bra011341.1-P	Field mustard	cytosol	30.24	32.32
AT4G32370.1	Thale cress	extracellular	26.19	32.16
CDY39884	Canola	extracellular	33.81	31.91
EES04449	Sorghum	extracellular	39.05	31.54
CDX75239	Canola	cytosol	30.24	31.28
CDX68839	Canola	cytosol	30.24	31.28
AT4G32380.1	Thale cress	extracellular	32.62	30.24
Bra040077.1-P	Field mustard	extracellular	26.19	30.14
KXG32718	Sorghum	extracellular	31.19	30.05
EES00620	Sorghum	extracellular	35.95	29.84
KXG22449	Sorghum	extracellular, golgi	32.86	29.49
KXG32428	Sorghum	mitochondrion	35.0	28.27
EES01142	Sorghum	extracellular	35.24	27.82
EES20001	Sorghum	extracellular	35.24	27.56
AT4G32375.1	Thale cress	extracellular	24.05	23.88
KXG32426	Sorghum	extracellular	34.29	20.81

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A1B6PML1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334
EnsemblPlants:KXG26899	ProteinID:KXG26899	ProteinID:KXG26899.1	PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375
PANTHER:PTHR31375:SF45	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3006G178900
SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00081ADD53	SEG:seg	:

Description

hypothetical protein

Coordinates

chr6:-:53322009..53324763

Molecular Weight (calculated)

43907.8 Da

IEP (calculated)

6.649

GRAVY (calculated)

0.035

Length

420 amino acids

Sequence
(BLAST)

001: MCAAGIICSG IMLAVASFLA CCAAGDAGRE LVFDVVAHGA RGDGSTDDTK AFEAAWNAAC GAKGPSAVMV VPAQRTFLVG PVSFQGPCAS QRVTVQIQGT
101: IMAPPSTAAS AWRNGTNLYW LMFDRVDGLR VTGNGVLDGS GQSWWVRRCH SDAVSTPLRF TRSSTDRTCV GSAPTALKLV SCNNLELSQF SSRNSPQMHI
201: AIVESSGVNV WGLNIAAPGN SPNTDGVHVE RSHGVQITNS TIGTGDDCVS ISSGSRFVTV DGIQCGPGHG VSIGSLGKNG EIAAVEYIDV KNVYFTNTMN
301: GARIKTWEGA QGYARSISFT DIEFDNVDHP IIIDQFYRDH TAELAVAISN VTYTNLKGTS ALPTAVAFDC GAGAGAGGSC TDIHVNSVMI TRSGGQQTVA
401: RCRNAKVSIS GQVYPEIPCH

Best Arabidopsis Sequence Match ( AT5G44840.1 )
(BLAST)

001: MEIILRGVFL LTLLHSILVN GQIYDVLEFG ADGNGITDDS KAFVKAWSAM CGSGGNSKTF IIPSNKTFLL QPLTFQGPCK SPSVQVKFDG KIVAPINKAA
101: WSDYKLFRWV SFKEIIGLTV NGSGTIHGRG SSFWKQGLPA SKRPTQLHFQ RCNDLMITGI TSFNSPKNHI SISECKRVKI TKIKLVAPHD SPNTDGINIS
201: ESSDVDIYDT VIGTGDDCVA INSGSMNINI ARMNCGPGHG ISVGSVGRDG EESIVENVQV TNCTFIRTDN GARIKTWPNG KGYAKNILFK SLTFRETKNP
301: IIIDQNYVDK GRLDVEESAV AISNVTFTDL RGTSKLDEII KIDCSKVTYC KDIVLDKIDI ATVDGNKPIV ECSNVYGKSI NANEANGCFK T

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:TAIR;Acc:AT5G44840]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.