CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
mitochondrion 2
extracellular 3
golgi 1
plasma membrane 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	mitochondrion
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039668_P001	Maize	plastid	77.03	75.97
HORVU3Hr1G024420.1	Barley	cytosol	32.25	62.33
TraesCS3B01G148500.1	Wheat	extracellular	54.76	58.85
TraesCS3D01G130300.1	Wheat	extracellular	54.29	58.35
TraesCS3A01G129400.1	Wheat	extracellular	55.22	58.05
TraesCS3A01G129500.1	Wheat	extracellular	53.6	56.76
TraesCS3B01G148600.1	Wheat	extracellular	53.83	56.31
TraesCS3D01G130400.1	Wheat	extracellular	53.13	55.58
Os01t0172900-00	Rice	nucleus	36.43	53.22
GSMUA_AchrUn_...	Banana	extracellular	28.07	42.01
GSMUA_AchrUn_...	Banana	mitochondrion	35.03	37.1
KXG26899	Sorghum	extracellular	32.95	33.81
EER93240	Sorghum	extracellular	35.27	33.63
EER90686	Sorghum	plastid	32.95	32.57
EES18597	Sorghum	extracellular	29.93	31.62
EER90681	Sorghum	extracellular	34.11	31.48
KXG39856	Sorghum	extracellular	29.93	30.0
KXG32718	Sorghum	extracellular	29.23	28.9
EES04449	Sorghum	extracellular	34.11	28.27
EES00620	Sorghum	extracellular	31.32	26.68
KXG32428	Sorghum	mitochondrion	31.55	26.15
KXG22449	Sorghum	extracellular, golgi	28.31	26.07
EES01142	Sorghum	extracellular	31.55	25.56
EES20001	Sorghum	extracellular	29.93	24.02
KXG32426	Sorghum	extracellular	31.32	19.51

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	UniProt:A0A1B6Q1K0	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650
GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334
EnsemblPlants:KXG31745	ProteinID:KXG31745	ProteinID:KXG31745.1	ProteinID:OQU86227.1	PFAM:PF00295	ScanProsite:PS00502
PANTHER:PTHR31375	PANTHER:PTHR31375:SF97	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710
EnsemblPlantsGene:SORBI_3003G050100	SUPFAM:SSF51126	UniParc:UPI00081AC052	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:4572286..4575894

Molecular Weight (calculated)

47362.9 Da

IEP (calculated)

8.151

GRAVY (calculated)

-0.038

Length

431 amino acids

Sequence
(BLAST)

001: MRVLEYFYKG KCWSIYHIGS MTLLPIQQRF HMILALKRTA VRHAFIMLLV LVWAIRSAQC HQQKYNVVRF HAAADGKTDD SQAFLATWQA ACSDQARPIM
101: VIPGRRTFLL SEVTFQGPCK SPITIQLDGN IVAPNHIWTT EQTNLLTIHG VDNLTLDGKG EIDGRGAIWW DCYNNKRCHT RPILLAFSLC NDLWVRNIRL
201: KNSADKHMTL FQCNQALIDG VSITAPADSP NTDGITVASS NSTTISNCSI QSGDDCVSIL SHTKNITVTH STCGPGHGIS VGSLGKSERA KVEQIVITNC
301: SFVGTMNGVR IKSWQGGKGY AKGFLFASLN MTEVQYPIVI DQFYCPQGNC PTKPGGVAIS DAKFIDIQGT SSEQEAIKLL CSQSVHCHGI YLSNVNLSWV
401: NHTTPTNATI LNAHGTTEGM VIPTIQFSES L

Best Arabidopsis Sequence Match ( AT5G44840.1 )
(BLAST)

001: MEIILRGVFL LTLLHSILVN GQIYDVLEFG ADGNGITDDS KAFVKAWSAM CGSGGNSKTF IIPSNKTFLL QPLTFQGPCK SPSVQVKFDG KIVAPINKAA
101: WSDYKLFRWV SFKEIIGLTV NGSGTIHGRG SSFWKQGLPA SKRPTQLHFQ RCNDLMITGI TSFNSPKNHI SISECKRVKI TKIKLVAPHD SPNTDGINIS
201: ESSDVDIYDT VIGTGDDCVA INSGSMNINI ARMNCGPGHG ISVGSVGRDG EESIVENVQV TNCTFIRTDN GARIKTWPNG KGYAKNILFK SLTFRETKNP
301: IIIDQNYVDK GRLDVEESAV AISNVTFTDL RGTSKLDEII KIDCSKVTYC KDIVLDKIDI ATVDGNKPIV ECSNVYGKSI NANEANGCFK T

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:TAIR;Acc:AT5G44840]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.