CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 3
vacuole 4
mitochondrion 1
extracellular 5
plasma membrane 4
endoplasmic reticulum 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90686	Sorghum	plastid	68.36	70.87
TraesCS5B01G468700.1	Wheat	extracellular	63.05	69.51
EER90681	Sorghum	extracellular	71.68	69.38
Zm00001d013032_P001	Maize	extracellular	74.11	68.79
TraesCS5D01G470100.1	Wheat	extracellular	61.95	68.29
TraesCS5B01G469000.1	Wheat	extracellular	60.84	67.73
TraesCS5A01G459000.1	Wheat	extracellular	61.06	67.48
TraesCS5D01G470200.1	Wheat	extracellular	61.06	65.87
HORVU5Hr1G109970.1	Barley	extracellular	60.18	65.54
TraesCS5B01G468900.1	Wheat	extracellular	60.4	65.16
TraesCS5A01G459100.1	Wheat	extracellular	59.73	64.9
Os03t0808000-00	Rice	extracellular	65.49	64.07
HORVU5Hr1G109980.2	Barley	extracellular, plastid	60.62	61.02
KXG39856	Sorghum	extracellular	41.59	43.72
EES18597	Sorghum	extracellular	37.17	41.18
KXG26899	Sorghum	extracellular	35.62	38.33
KXG31745	Sorghum	extracellular	33.63	35.27
KXG32718	Sorghum	extracellular	31.86	33.03
EES04449	Sorghum	extracellular	37.39	32.5
EES00620	Sorghum	extracellular	36.28	32.41
KXG22449	Sorghum	extracellular, golgi	31.86	30.77
KXG32428	Sorghum	mitochondrion	34.96	30.38
EES01142	Sorghum	extracellular	34.51	29.32
EES20001	Sorghum	extracellular	34.29	28.86
KXG32426	Sorghum	extracellular	36.06	23.55

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	EntrezGene:8057105	UniProt:C5WW44	EnsemblPlants:EER93240	ProteinID:EER93240
ProteinID:EER93240.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31375
PANTHER:PTHR31375:SF98	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3001G045800
SUPFAM:SSF51126	unigene:Sbi.18150	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A82A6D	RefSeq:XP_002466242.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:3388624..3391471

Molecular Weight (calculated)

47656.3 Da

IEP (calculated)

8.015

GRAVY (calculated)

-0.168

Length

452 amino acids

Sequence
(BLAST)

001: MASPSRTNKP QLVLWPSLLT LLIFLPGALE ASAAGAGTGT STFSPSSISS SADGAAAAAT GRRSLLAASP SSSVFSLDRY GACGDGSHDD TQALARAWNA
101: ACASPQPAVL LVPGGKRYLL KLVTLSGPCK SSVTVTVKGT LVASPNRSDW SDEDRRHWIV FRQVDRLTVN GAGTVDGNGE TWWKNSCKIN KALPCKEAPT
201: ALSFHFCTSL RVQDLNVVNS QQIHMSIEDC TGVQLTGLSI TAPGTSPNTD GIHITRSNDV QVTNCKIKTG DDCLSIESGT HNLHVSQVVC GPGHGISIGS
301: LGDDNSRAEV SGITIDSVQL YGTTNGARIK TYQGGSGYAK DITFQNMVMY DVANPIIIDQ NYCDKATAPC ELQGSAVEVS NVVFKNIKGT TVTKDAIMLN
401: CSRNVPCLGI TLQNINLRMQ GSNGKDAAES TCQNARWRKS GTVLPQPCTS KN

Best Arabidopsis Sequence Match ( AT2G41850.1 )
(BLAST)

001: MARCTNLVTV FLLWALLMFS WCKASRISPN VYDHSYKRFK SDSLIKRRED ITGLRSFVRA SLRTPTTVSV SDFGAKGDGK TDDTQAFVNA WKKACSSNGA
101: VNLLVPKGNT YLLKSIQLTG PCNSILTVQI FGTLSASQKR SDYKDISKWI MFDGVNNLSV DGGDTGVVDG NGETWWQNSC KRNKAKPCTK APTALTFYNS
201: KSLIVKNLKV RNAQQIQISI EKCSNVQVSN VVVTAPADSP NTDGIHITNT QNIRVSESII GTGDDCISIE SGSQNVQIND ITCGPGHGIS IGSLGDDNSK
301: AFVSGVTVDG AKLSGTDNGV RIKTYQGGSG TASNIIFQNI QMDNVKNPII IDQDYCDKSK CTTEKSAVQV KNVVYRDISG TSASENAITF NCSKNYPCQG
401: IVLDRVNIKG GKATCTNANV VDKGAVLPQC NST

Arabidopsis Description

ADPG2Polygalacturonase ADPG2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY29]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.