Factsheet for TraesCS5D01G470100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G468700.1	Wheat	extracellular	92.93	92.93
TraesCS5B01G469000.1	Wheat	extracellular	91.22	92.12
TraesCS5A01G459000.1	Wheat	extracellular	90.73	90.95
HORVU5Hr1G109980.2	Barley	extracellular, plastid	90.0	82.18
TraesCS5D01G470200.1	Wheat	extracellular	77.56	75.89
TraesCS1D01G129600.2	Wheat	cytosol, extracellular, nucleus	50.24	63.58
EER90686	Sorghum	plastid	67.32	63.3
Zm00001d034551_P001	Maize	extracellular	66.83	62.84
EER93240	Sorghum	extracellular	68.29	61.95
Zm00001d034552_P001	Maize	extracellular	66.59	61.9
TraesCS7D01G164200.1	Wheat	extracellular	60.73	59.29
EER90681	Sorghum	extracellular	67.07	58.89
Os03t0808000-00	Rice	extracellular	64.88	57.58
Zm00001d034559_P001	Maize	extracellular	66.59	57.47
Zm00001d013032_P001	Maize	extracellular	65.85	55.44
TraesCS1D01G066400.1	Wheat	cytosol	45.37	48.82
TraesCS1D01G066300.1	Wheat	extracellular, golgi	54.15	44.49
TraesCS2D01G402100.1	Wheat	extracellular	42.2	42.72
TraesCS4D01G243600.1	Wheat	extracellular	44.88	42.49
TraesCS2D01G402200.1	Wheat	extracellular	38.54	40.41
TraesCS1D01G370300.3	Wheat	extracellular	40.49	40.39
TraesCS2D01G402300.1	Wheat	extracellular	31.95	39.34
TraesCS2D01G402000.1	Wheat	extracellular	40.24	38.55
TraesCS3D01G130300.1	Wheat	extracellular	36.59	37.41
TraesCS3D01G130400.1	Wheat	extracellular	35.37	35.19
TraesCS1D01G370700.1	Wheat	extracellular	35.85	35.08
TraesCS7D01G326800.1	Wheat	extracellular	39.51	33.2
TraesCS1D01G370800.1	Wheat	extracellular	33.9	32.03
TraesCS3D01G021700.1	Wheat	extracellular	34.15	31.75
TraesCS1D01G425600.1	Wheat	extracellular	40.73	31.69
TraesCS3D01G223900.1	Wheat	extracellular	40.73	31.16
TraesCS1D01G311000.1	Wheat	extracellular	36.34	31.11

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295
ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF98	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS5D01G470100	EnsemblPlants:TraesCS5D01G470100.1	SEG:seg

Description

No Description!

Coordinates

chr5D:-:510958185..510959417

Molecular Weight (calculated)

43419.6 Da

IEP (calculated)

8.045

GRAVY (calculated)

-0.150

Length

410 amino acids

Sequence
(BLAST)

001: MASFMAAALL VLLLLSSSRM SGASPLPAET QQNVFVVDNY GARGDGKHDD VQPLAKAWNA ACSSSRPAVL LVPEGKTYLL SSVTLSGPCK SSVVFMVKGT
101: LAAPRSRSAW SQNDRSRWIL IQGVNGLTVS GGGTINGNGD VWWTNSCKVN KALPCTKAPT ALTFHQCNNL QVENLKLVNS QQIHLSVEDC SAVQLARLSI
201: TAPGTSPNTD GIHITRSKDV QVKDCVIKTG DDCISIENGA HNLDVSKVVC GPGHGISVGS LGDDNSRAEV SGITIDSVQL YGTTNGARIK TWQGGSGYAK
301: GITFQNMIMD NVQNPIIIDQ SYCDSAKPCN RGHGSAVEVS NVIFKNIRGT TVSKDAIKLS CSNTISCSGI VLENIDLKME GGKGDTESTC QNAKWQKSGT
401: VIPQPCQFQN

Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)

001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S

Arabidopsis Description

ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.