CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d040589_P001	Maize	extracellular	91.7	92.99
Zm00001d009057_P001	Maize	extracellular	75.3	90.07
Os01t0296200-00	Rice	extracellular	43.87	83.46
HORVU1Hr1G067840.1	Barley	extracellular, plastid	75.69	80.46
TraesCS1B01G322500.1	Wheat	extracellular	75.89	79.34
TraesCS1A01G311100.1	Wheat	extracellular	75.89	79.34
TraesCS1D01G311000.1	Wheat	extracellular	75.1	79.33
GSMUA_Achr11P...	Banana	extracellular	52.37	60.78
GSMUA_Achr9P16670_001	Banana	extracellular, plasma membrane	57.71	58.28
PGSC0003DMT400007095	Potato	cytosol	48.62	56.55
CDY67535	Canola	extracellular	34.39	55.95
PGSC0003DMT400013344	Potato	extracellular	51.38	55.08
KRH31755	Soybean	extracellular	51.38	54.74
VIT_07s0005g02090.t01	Wine grape	extracellular	50.2	54.62
KRH69173	Soybean	extracellular	50.99	54.55
Solyc01g079130.1.1	Tomato	extracellular	50.4	54.03
Solyc01g100980.2.1	Tomato	extracellular	50.0	53.15
KRH68311	Soybean	extracellular	48.42	53.03
KRG96576	Soybean	extracellular	48.42	53.03
VIT_14s0060g00620.t01	Wine grape	extracellular	48.62	53.02
AT1G02460.1	Thale cress	extracellular	51.19	52.75
KRG96690	Soybean	extracellular	47.83	52.72
Bra032600.1-P	Field mustard	extracellular	50.79	52.34
CDX77909	Canola	extracellular	50.4	51.93
CDX89966	Canola	extracellular	50.4	51.93
Bra033328.1-P	Field mustard	extracellular	50.2	51.73
CDY15246	Canola	extracellular	50.2	51.73
GSMUA_Achr3P08400_001	Banana	extracellular	56.92	51.25
AT4G01890.1	Thale cress	extracellular	46.25	50.11
Bra000911.1-P	Field mustard	extracellular, vacuole	47.83	49.79
CDY71357	Canola	extracellular, vacuole	27.67	44.16
KXG32428	Sorghum	mitochondrion	43.48	42.31
EES18597	Sorghum	extracellular	31.82	39.46
KXG32718	Sorghum	extracellular	33.4	38.76
EER90686	Sorghum	plastid	31.82	36.93
EES20001	Sorghum	extracellular	38.54	36.31
EER93240	Sorghum	extracellular	32.41	36.28
EES01142	Sorghum	extracellular	37.94	36.09
KXG26899	Sorghum	extracellular	29.84	35.95
KXG32426	Sorghum	extracellular	48.42	35.4
KXG39856	Sorghum	extracellular	29.45	34.65
EER90681	Sorghum	extracellular	31.42	34.05
EES04449	Sorghum	extracellular	34.98	34.04
KXG31745	Sorghum	extracellular	26.68	31.32
KXG22449	Sorghum	extracellular, golgi	26.68	28.85

Protein Annotations

Gene3D:2.160.20.10	MapMan:50.3.2	EntrezGene:8060309	UniProt:C5XI35	EnsemblPlants:EES00620	ProteinID:EES00620
ProteinID:EES00620.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787
GO:GO:0016798	GO:GO:0071555	InterPro:Glyco_hydro_28	InterPro:IPR012334	PFAM:PF00295	PANTHER:PTHR31375
PANTHER:PTHR31375:SF99	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	EnsemblPlantsGene:SORBI_3003G141800
SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A843E2	RefSeq:XP_002455500.1	SEG:seg

Description

hypothetical protein

Coordinates

chr3:+:14045848..14048418

Molecular Weight (calculated)

52655.7 Da

IEP (calculated)

7.033

GRAVY (calculated)

-0.181

Length

506 amino acids

Sequence
(BLAST)

001: MEFTARTRTA IALLLSLAAF SSFLCGGVQG GRHHHHHAKH TKHNSARPPS AHAPGPASGG RRHASPPPHA RRPVSPPAPP PSSSGGYPTP GAAAPEPAPA
101: PAAAGSVYDV VKDFGAVGDG VTDDTDAVKT AWDTACQDDG DSVVLAAAGY SFLVHSTVFT GPCQGSVTIQ LDGTIVAPSD PDKWPANSKR NWLLFYQAHG
201: MSLKGAGLID GKGQKWWELP CKSQKGHGGS SGHGAACDSP VAMRFFMTNN VTLQGLKVQN SPEFHIRFDS CRGVVASGLS ISSPALSPNT DGIHVENSQD
301: VVITNTAVSN GDDCVSIGAG TLNMHVENVT CGPGGHGISI GSLGKQGSRA CVANVTVRNA VIRHSDNGVR IKTWQGGSGA VSAVSFENVR MDAVRNPIII
401: DQYYCLSKSC ENATSAVFVN GVSYAGIRGT YDARTPPIHF GCSDAVPCTN ITLSDVELLP ASGETIDDPF CWNVYGSAAT PTVPPVPCLM EGVPRNVEDN
501: SSLKCY

Best Arabidopsis Sequence Match ( AT1G02460.1 )
(BLAST)

001: MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG
101: ETDDTEAFKT AWDSSCNNEN NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGEG VIDGRGQKWW
201: DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL QGSLVDKCGS S

Arabidopsis Description

At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.