CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68311	Soybean	extracellular	96.97	96.97
KRH69173	Soybean	extracellular	81.17	79.28
KRH31755	Soybean	extracellular	80.52	78.32
VIT_07s0005g02090.t01	Wine grape	extracellular	72.94	72.47
CDY67535	Canola	extracellular	46.1	68.49
Solyc01g079130.1.1	Tomato	extracellular	68.4	66.95
PGSC0003DMT400013344	Potato	extracellular	68.18	66.74
AT1G02460.1	Thale cress	extracellular	67.1	63.14
Bra032600.1-P	Field mustard	extracellular	66.88	62.93
CDX77909	Canola	extracellular	66.67	62.73
CDX89966	Canola	extracellular	66.67	62.73
Bra033328.1-P	Field mustard	extracellular	66.45	62.53
CDY15246	Canola	extracellular	66.23	62.32
GSMUA_Achr11P...	Banana	extracellular	58.44	61.93
KRG96690	Soybean	extracellular	61.47	61.87
Os01t0296200-00	Rice	extracellular	34.85	60.53
AT4G01890.1	Thale cress	extracellular	59.74	59.1
GSMUA_Achr9P16670_001	Banana	extracellular, plasma membrane	62.55	57.68
Bra000911.1-P	Field mustard	extracellular, vacuole	60.39	57.41
KRH36916	Soybean	extracellular, nucleus	58.01	56.54
KRH11881	Soybean	extracellular	57.79	55.74
KRH42407	Soybean	extracellular	58.23	55.58
TraesCS1B01G322500.1	Wheat	extracellular	56.93	54.34
KRH58524	Soybean	extracellular	57.58	54.29
TraesCS1D01G311000.1	Wheat	extracellular	56.28	54.28
HORVU1Hr1G067840.1	Barley	extracellular, plastid	55.84	54.2
TraesCS1A01G311100.1	Wheat	extracellular	56.49	53.93
CDY71357	Canola	extracellular, vacuole	36.15	52.68
Zm00001d040589_P001	Maize	extracellular	54.33	50.3
GSMUA_Achr3P08400_001	Banana	extracellular	59.52	48.93
Zm00001d009057_P001	Maize	extracellular	44.37	48.46
EES00620	Sorghum	extracellular	53.03	48.42
KRH56581	Soybean	extracellular	40.48	42.6
KRG93260	Soybean	extracellular	40.69	42.44
KRH69612	Soybean	extracellular	40.48	40.48
KRH74551	Soybean	extracellular	39.61	39.7
KRH45648	Soybean	nucleus	45.24	38.85
KRG99364	Soybean	extracellular, nucleus	44.37	38.1
KRH32949	Soybean	extracellular	35.71	37.67
KRH71979	Soybean	extracellular	34.85	37.62
KRH23942	Soybean	extracellular	35.06	36.82
KRH13966	Soybean	extracellular	34.85	36.67
KRH23567	Soybean	extracellular	31.82	36.66
KRH14715	Soybean	cytosol, extracellular, nucleus, plastid	27.27	36.31
KRH48978	Soybean	extracellular	23.38	36.24
KRH23786	Soybean	cytosol, extracellular, nucleus, plastid	28.14	36.11
KRG88958	Soybean	extracellular	27.71	36.06
KRH39858	Soybean	extracellular	34.2	35.83
KRH09752	Soybean	extracellular	35.5	35.81
KRH66273	Soybean	extracellular	23.59	35.16
KRH66955	Soybean	extracellular	35.06	34.91
KRH33163	Soybean	extracellular, plastid	35.5	34.38
KRH66276	Soybean	extracellular	26.41	34.37
KRH05150	Soybean	extracellular	19.91	34.2
KRH09740	Soybean	extracellular	31.17	33.88
KRH66305	Soybean	extracellular	26.84	32.21
KRG95273	Soybean	extracellular	36.36	32.12
KRG99363	Soybean	extracellular	37.01	19.41

Protein Annotations

EntrezGene:100778836	Gene3D:2.160.20.10	MapMan:50.3.2	EMBL:ACUP02012157	EnsemblPlantsGene:GLYMA_19G219700	GO:GO:0003674
GO:GO:0003824	GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0071555
InterPro:Glyco_hydro_28	UniProt:I1NBG4	InterPro:IPR012334	EnsemblPlants:KRG96576	ProteinID:KRG96576	ProteinID:KRG96576.1
PFAM:PF00295	ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF43	InterPro:PbH1	InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000233E5D8
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr19:-:47198449..47201090

Molecular Weight (calculated)

50604.3 Da

IEP (calculated)

7.270

GRAVY (calculated)

-0.207

Length

462 amino acids

Sequence
(BLAST)

001: MKHSHILPLA FCIFFLTLVI LVQARHHSHH TKHKHSHSHK SCKTPKPAPP PSPPHNENYN NASGILDVRK FGAIGDGETD DTGSFKMAWD SACQSESAVN
101: VILVPQGFSF LIQSTIFTGP CQGVLVLKVD GTLMPPDGPE SWPKNNSRHQ WLVFYRINGM SLEGSGLIDG RGEKWWDLPC KPHKGPHGTT LPGPCDSPIA
201: IRFFMSSNLT VQGLRIKNSP QFHFRFDGCK NVHIESIYIT APKLSPNTDG IHIENTNDMK IYNSVISNGD DCVSIGSGCN DVDIKNITCG PGHGISIGSL
301: GNHNSRACVS NIMVRDSFIK VTDNGVRIKT WQGGSGSVSG VTFSNIHMVS VRNPIIIDQF YCLTKECTNK TSAVSVSNII YTNIKGTYDI RSPPMRFACS
401: DSVPCTNLTL SDIELLPSQG DIVHDPFCWN AYGDLETLTI PPVSCLLEGT PQSVLDYDIT RC

Best Arabidopsis Sequence Match ( AT1G02460.1 )
(BLAST)

001: MLTSTYNRNQ VLGFMTLILT LMSLSEARNH HHKEKHKHNN HNHHSSKPKP PSSSISQPPT PPPGPPDSPA PSLPPSPSDD PADDNNGIYN VRKYGAVGDG
101: ETDDTEAFKT AWDSSCNNEN NTDSVLLVPY GYTFMIQSTI FTGPCRSYQF FQVDGTIVTP DGPESWPSNI SKRQWLVFYR VNGMALKGEG VIDGRGQKWW
201: DLPCKPHRSV NKSAIVTGPC DSPIALRFFM SSNLRVEGLQ IKNSPQFHFR FDGCQGVHVE SLHITAPPLS PNTDGIHIEN SNSVTIYNSI ISNGDDCVSI
301: GSGSYDVDIR NLTCGPGGHG ISIGSLGNHN SRACVSNITV RDSVIKYSDN GVRIKTWQGG SGSVSGVTFN NIHVDSVRNP IIIDQYYCMT KDCANKTSAV
401: FVSDIAYQGI KGTYDIRSPP MHFGCSDAVP CTNLTLSDIE LLPAKGEIVL DPFCWNAYGI AEELSIPPVW CLMSDPPKGL QGSLVDKCGS S

Arabidopsis Description

At1g02460 [Source:UniProtKB/TrEMBL;Acc:Q9FWX5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.