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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, nucleus

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, nucleus
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH45648 Soybean nucleus 96.28 96.28
VIT_01s0127g00400.t01 Wine grape extracellular, mitochondrion, plastid 70.63 73.36
Os01t0637500-00 Rice cytosol, extracellular 44.42 70.71
Solyc05g005170.2.1 Tomato nucleus 66.36 70.28
PGSC0003DMT400035162 Potato extracellular 66.17 69.67
Os05t0578600-01 Rice cytosol, extracellular 40.33 69.55
HORVU3Hr1G031180.1 Barley extracellular 18.03 68.79
Bra031724.1-P Field mustard extracellular 64.13 66.99
CDY37962 Canola extracellular, golgi, vacuole 66.17 66.92
Bra019912.1-P Field mustard extracellular, golgi, vacuole 65.8 66.42
CDX93397 Canola extracellular, golgi, vacuole 65.8 66.42
GSMUA_Achr4P02960_001 Banana extracellular 58.55 66.32
GSMUA_Achr6P22080_001 Banana extracellular 59.67 66.19
CDY54228 Canola extracellular, golgi, vacuole 64.68 65.91
Bra027148.1-P Field mustard extracellular 65.06 65.3
CDY50367 Canola extracellular, golgi 65.06 65.3
CDY47212 Canola extracellular 65.06 65.3
CDY20962 Canola extracellular, golgi, vacuole 64.13 64.97
Bra018429.1-P Field mustard extracellular, golgi, vacuole 63.94 64.78
CDY20612 Canola extracellular 63.94 64.78
AT1G10640.1 Thale cress extracellular, golgi 63.94 64.66
CDY34877 Canola extracellular, golgi 58.74 64.62
GSMUA_Achr5P09080_001 Banana extracellular 58.36 64.48
AT1G60590.1 Thale cress extracellular 64.68 64.44
KRH56581 Soybean extracellular 50.37 61.73
KRG93260 Soybean extracellular 50.74 61.63
HORVU3Hr1G056270.10 Barley extracellular 60.04 60.71
TraesCS3D01G223900.1 Wheat extracellular 60.22 60.45
GSMUA_Achr1P27280_001 Banana extracellular 57.25 60.39
TraesCS3A01G225800.2 Wheat extracellular 60.41 60.3
EES01142 Sorghum extracellular 59.48 60.15
TraesCS3B01G258600.2 Wheat extracellular 59.67 59.78
Os01t0636500-01 Rice extracellular 59.67 59.67
Zm00001d011444_P002 Maize extracellular 59.67 59.33
Zm00001d044110_P001 Maize extracellular 59.67 59.23
TraesCS1A01G418000.1 Wheat extracellular 55.95 59.02
EES20001 Sorghum extracellular 58.74 58.85
TraesCS1B01G448100.1 Wheat extracellular 57.06 57.92
TraesCS1D01G425600.1 Wheat extracellular 55.39 56.55
HORVU1Hr1G091430.5 Barley extracellular 56.88 55.23
Zm00001d009667_P001 Maize extracellular, mitochondrion, plastid 51.12 53.29
KRH74551 Soybean extracellular 41.08 47.94
KRH69612 Soybean extracellular 40.15 46.75
KRH36916 Soybean extracellular, nucleus 39.59 44.94
KRH69173 Soybean extracellular 39.22 44.61
KRG96576 Soybean extracellular 38.1 44.37
KRH11881 Soybean extracellular 39.41 44.26
KRH31755 Soybean extracellular 39.03 44.21
KRH68311 Soybean extracellular 37.73 43.94
KRH42407 Soybean extracellular 39.03 43.39
KRH58524 Soybean extracellular 39.03 42.86
KRG96690 Soybean extracellular 36.43 42.7
KRH66273 Soybean extracellular 21.93 38.06
KRH14715 Soybean cytosol, extracellular, nucleus, plastid 24.35 37.75
KRH71979 Soybean extracellular 29.93 37.62
KRH23786 Soybean cytosol, extracellular, nucleus, plastid 25.09 37.5
KRH66276 Soybean extracellular 24.72 37.46
KRH05150 Soybean extracellular 18.59 37.17
KRH23567 Soybean extracellular 27.14 36.41
KRH32949 Soybean extracellular 29.55 36.3
KRH23942 Soybean extracellular 29.55 36.14
KRH66305 Soybean extracellular 25.84 36.1
KRH48978 Soybean extracellular 19.7 35.57
KRH13966 Soybean extracellular 29.0 35.54
KRH39858 Soybean extracellular 29.0 35.37
KRG88958 Soybean extracellular 23.05 34.93
KRH09740 Soybean extracellular 27.14 34.35
KRH33163 Soybean extracellular, plastid 30.3 34.17
KRH09752 Soybean extracellular 29.0 34.06
KRH66955 Soybean extracellular 28.81 33.41
KRG95273 Soybean extracellular 28.62 29.45
KRG99363 Soybean extracellular 32.9 20.09
Protein Annotations
EntrezGene:100783813MapMan:50.3.2EMBL:ACUP02011040EnsemblPlantsGene:GLYMA_18G139900GO:GO:0003674GO:GO:0003824
GO:GO:0004650GO:GO:0005575GO:GO:0005576GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0016798GO:GO:0071555InterPro:Glyco_hydro_28
UniProt:I1N1I1EnsemblPlants:KRG99364ProteinID:KRG99364ProteinID:KRG99364.1PFAM:PF00295ScanProsite:PS00502
PANTHER:PTHR31375PANTHER:PTHR31375:SF58InterPro:PbH1InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126
SignalP:SignalP-noTMUniParc:UPI000233E9B3SEG:seg:::
Description
hypothetical protein
Coordinates
chr18:+:21123201..21129260
Molecular Weight (calculated)
58631.4 Da
IEP (calculated)
7.758
GRAVY (calculated)
-0.380
Length
538 amino acids
Sequence
(BLAST)
001: MSGLSFRGFT YMLLIAFLIW SFNFEACIAR RGKHWRQSRD VSASVYKKKG KNYGNAHNKY HGGGSKSKPP SSHKGTPTLP KPPPQHKNTP SPPYPTPPSD
101: DTPTTPPPKA YNGGGHSSAT TFNVLDFGAK GDGKSDDTKA FQEAWAEACK IESSTMLVPA DYAFFVGPIS FSGPYCKPSI VFQLDGTIVA PTSPKAWGKG
201: LLQWLEFSKL VGITIQGNGI IDGRGSVWWQ DNQYDDPIDD EEKLIVPLNH TVGSPSPPLP IQSEMGGKMP SVKPTALRFY GSFNPTVTGI TIQNSPQCHL
301: KFDNCNGVMV HDVTISSPGD SPNTDGIHLQ NSKDVLIYSS SMACGDDCIS IQTGCSNIYV HNVNCGPGHG ISIGSLGKDN TRACVSNITV RDVNMHNTMN
401: GVRIKTWQGG SGSVQGVLFS NIQVSEVELP IVIDQFYCDK RTCKNQTSAV SLAGINYERI RGTYTVKPVH FACSDNLPCV DVSLTSVELK PIQEQYHLYN
501: PFCWQTYGEL KTPTVPPIDC LQIGKPTNNR IQTDHDLC
Best Arabidopsis Sequence Match ( AT1G60590.1 )
(BLAST)
001: MITRESLTLR SITMMTLVTI LVWSATLETC IARRGRHWRH HHRSSSSLSD SLSSKKPKSH ENNHHHMSHK SKPKPKMKTQ PPKSNDGSPV VSQPPQVQQP
101: PPPHVQPPPT PLPLQPVEDS QQFNVLDFGA KGDGMSDDTQ AFEAAWASAC KVEASTMIIP PDYIFLVGPI SFSGPYCQAN IVFQLEGMIV APTDTESWGG
201: GLMWWIEFTK LSGITIQGNG VIDGRGTVWW QQDYLSDYPI DDDFKLIVPL NNSVQERPPM PIRSELNWRM PSIKPTALRF YGSIDVTVTG ITIQNSPQCH
301: LKFDNCVKVL VHDVNVSSPG DSPNTDGIHL QNTRDVMIHT TTLACGDDCI SIQTGCSNVY VHNVNCGPGH GISIGSLGKD STKACVSNIT VRDVVMHNTM
401: TGVRIKTWQG GIGSVKGILF SNIQLTEVQL PIVIDQFYCD HSKCMNHTSA VSVEGVTYEK IRGTYTVKPV HFACSDSFPC IDVQLSGIEL KPVQLQYHMY
501: DPFCWKTFGE LNSATVPPID CLQIGKPARN GVHSDHDICL
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:O22699]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.