CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74551	Soybean	extracellular	93.07	93.28
VIT_01s0127g00120.t01	Wine grape	extracellular	68.83	66.39
PGSC0003DMT400035101	Potato	extracellular, golgi	64.07	61.54
AT3G26610.1	Thale cress	extracellular	62.55	61.49
Solyc05g005040.2.1	Tomato	extracellular	62.12	60.93
Bra025216.1-P	Field mustard	extracellular	61.04	60.0
CDX83631	Canola	extracellular	61.04	59.87
CDY13645	Canola	extracellular	60.82	59.79
GSMUA_Achr1P12720_001	Banana	extracellular	50.43	56.83
Os01t0549000-00	Rice	extracellular	34.2	55.63
KXG32718	Sorghum	extracellular	50.43	53.44
Zm00001d011156_P001	Maize	plastid	48.7	51.61
KRH56581	Soybean	extracellular	40.04	42.14
KRG93260	Soybean	extracellular	40.26	41.99
KRH45648	Soybean	nucleus	47.4	40.71
KRG96576	Soybean	extracellular	40.48	40.48
KRH68311	Soybean	extracellular	40.26	40.26
KRG99364	Soybean	extracellular, nucleus	46.75	40.15
KRH31755	Soybean	extracellular	40.69	39.58
KRH69173	Soybean	extracellular	40.48	39.53
KRH36916	Soybean	extracellular, nucleus	39.39	38.4
KRG96690	Soybean	extracellular	37.66	37.91
KRH11881	Soybean	extracellular	38.74	37.37
KRH42407	Soybean	extracellular	38.74	36.98
KRH58524	Soybean	extracellular	38.31	36.12
KRH05150	Soybean	extracellular	20.78	35.69
KRH23786	Soybean	cytosol, extracellular, nucleus, plastid	27.49	35.28
KRH71979	Soybean	extracellular	32.25	34.81
KRH14715	Soybean	cytosol, extracellular, nucleus, plastid	25.97	34.58
KRH23567	Soybean	extracellular	29.87	34.41
KRH48978	Soybean	extracellular	22.08	34.23
KRH66273	Soybean	extracellular	22.73	33.87
KRH23942	Soybean	extracellular	32.03	33.64
KRH66276	Soybean	extracellular	25.76	33.52
KRH66305	Soybean	extracellular	27.92	33.51
KRH09752	Soybean	extracellular	32.68	32.97
KRH39858	Soybean	extracellular	31.39	32.88
KRH66955	Soybean	extracellular	32.9	32.76
KRG88958	Soybean	extracellular	25.11	32.68
KRH32949	Soybean	extracellular	30.95	32.65
KRH09740	Soybean	extracellular	29.65	32.24
KRH13966	Soybean	extracellular	30.09	31.66
KRH33163	Soybean	extracellular, plastid	31.82	30.82
KRG95273	Soybean	extracellular	32.25	28.49
KRG99363	Soybean	extracellular	32.03	16.8

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.3	EMBL:ACUP02000722	EnsemblPlantsGene:GLYMA_02G037300	GO:GO:0003674	GO:GO:0003824
GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798
GO:GO:0071555	InterPro:Glyco_hydro_28	UniProt:I1JC53	InterPro:IPR012334	EnsemblPlants:KRH69612	ProteinID:KRH69612
ProteinID:KRH69612.1	PFAM:PF00295	PANTHER:PTHR31375	PANTHER:PTHR31375:SF12	InterPro:PbH1	InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulence	SMART:SM00710	SUPFAM:SSF51126	TMHMM:TMhelix	UniParc:UPI0002336E49	SEG:seg

Description

hypothetical protein

Coordinates

chr2:+:3462332..3465695

Molecular Weight (calculated)

50866.1 Da

IEP (calculated)

8.938

GRAVY (calculated)

-0.159

Length

462 amino acids

Sequence
(BLAST)

001: MKRSRSFSLL FYLYLLVIVF ATFSIVSMEA RKTNIKKKLH KRHKGGHTRG SHSPCPVPAP QGSTFDVLAF GAKGNGVSDD SEALLAAWNG ACKVAAATVK
101: IPAQFKFLMK PVTLQGPCMP DLTLQIDGTL LAPSEASSWP QSSLFQWINF KWVQNFTIIG SGTVDGQGYN WWSSSEFYDM QKTYSKHIPS IKPTAIRFYS
201: SNFVTVRDIR IINSPLCHLK FDNSKGIKVN NITISSPENS PNTDGIHLQN TQDVEIQRSI ISTGDDCVSI QTGCSNVHVH HINCGPGHGI SLGGLGKDKT
301: SAACVSDITV EDISMKNTLF GARIKTWQGG IGMVKNVTFS RIQVYDVMYP IMIDQYYCDK EICKNHTSTV VISGVKFDQI HGTYGMQPVH LACSNSIPCT
401: DVDLSDIQLS PSPKYRGLQQ AVCWNSYGKS QGPLIPSSID YCLRSGGGLI KRIARSHDRV CY

Best Arabidopsis Sequence Match ( AT3G26610.1 )
(BLAST)

001: MKTVKSLPIL AMLLGVIIVA AAISTVSVEG RKHHVKKIKP KHRRHSKNTP TGSPAPAPYP STNEGVFNIF SYGAKGDGVS DDSKALVGAW KAACKVVGGK
101: VEIPAGTQFL VKAVTLQGPC KEETVVQIEG ILVAPEKIGS WPNSSLFQWL NFKWVSHLTI QGSGTLNGRG YNWWNLDTYQ TQTRNKYIPP MKPTALRFYS
201: SNNVTVRDIS IVNSPLCHLK FDDSDGVKVN NITISSPENS PNTDGIHLQN TRNVEIQHSN IACGDDCVSI QTGSSNVHIH HINCGPGHGI SIGGLGKDKS
301: VACVSDIIVE DISIQNTLAG VRIKTWQGGL GVVKNLTFSN IQVKDVKVPI VIDQYYCDKS KCKNQTRAVS ISGVKYNNIV GSFTVQPVRI ACSNNVPCMD
401: VDLMDIRLRP SGGIRGLQTH QQQQALCWNS YGKTQGPLVP SSIGYCLRKS NIGGYYSQKV SRSYDKICPS

Arabidopsis Description

Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q38958]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.