Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG93260 | Soybean | extracellular | 94.99 | 94.13 |
| CDX69569 | Canola | extracellular | 64.46 | 64.46 |
| VIT_14s0066g01060.t01 | Wine grape | extracellular | 70.84 | 64.39 |
| Bra008748.1-P | Field mustard | extracellular | 64.24 | 64.24 |
| CDY09873 | Canola | extracellular | 64.01 | 64.01 |
| AT5G14650.1 | Thale cress | extracellular | 61.73 | 62.3 |
| Os05t0578600-01 | Rice | cytosol, extracellular | 42.82 | 60.26 |
| Os01t0637500-00 | Rice | cytosol, extracellular | 45.33 | 58.88 |
| HORVU3Hr1G031180.1 | Barley | extracellular | 18.22 | 56.74 |
| Solyc07g015870.2.1 | Tomato | extracellular | 57.4 | 56.12 |
| PGSC0003DMT400077010 | Potato | cytosol | 58.77 | 55.72 |
| GSMUA_Achr4P02960_001 | Banana | extracellular | 59.68 | 55.16 |
| GSMUA_Achr6P22080_001 | Banana | extracellular | 60.14 | 54.43 |
| GSMUA_Achr5P09080_001 | Banana | extracellular | 57.4 | 51.75 |
| GSMUA_Achr1P27280_001 | Banana | extracellular | 59.45 | 51.18 |
| KRH45648 | Soybean | nucleus | 62.19 | 50.74 |
| KRG99364 | Soybean | extracellular, nucleus | 61.73 | 50.37 |
| TraesCS1A01G418000.1 | Wheat | extracellular | 57.18 | 49.22 |
| HORVU3Hr1G056270.10 | Barley | extracellular | 58.09 | 47.93 |
| EES01142 | Sorghum | extracellular | 57.63 | 47.56 |
| TraesCS1B01G448100.1 | Wheat | extracellular | 57.18 | 47.36 |
| TraesCS3A01G225800.2 | Wheat | extracellular | 58.09 | 47.31 |
| EES20001 | Sorghum | extracellular | 57.86 | 47.3 |
| TraesCS3B01G258600.2 | Wheat | extracellular | 57.63 | 47.11 |
| TraesCS1D01G425600.1 | Wheat | extracellular | 56.49 | 47.06 |
| Os01t0636500-01 | Rice | extracellular | 57.63 | 47.03 |
| Zm00001d009667_P001 | Maize | extracellular, mitochondrion, plastid | 55.13 | 46.9 |
| Zm00001d044110_P001 | Maize | extracellular | 57.86 | 46.86 |
| TraesCS3D01G223900.1 | Wheat | extracellular | 57.18 | 46.83 |
| Zm00001d011444_P002 | Maize | extracellular | 57.18 | 46.4 |
| HORVU1Hr1G091430.5 | Barley | extracellular | 56.95 | 45.13 |
| KRH69173 | Soybean | extracellular | 43.74 | 40.59 |
| KRG96576 | Soybean | extracellular | 42.6 | 40.48 |
| KRH68311 | Soybean | extracellular | 42.6 | 40.48 |
| KRH74551 | Soybean | extracellular | 42.14 | 40.13 |
| KRH36916 | Soybean | extracellular, nucleus | 43.28 | 40.08 |
| KRH69612 | Soybean | extracellular | 42.14 | 40.04 |
| KRH31755 | Soybean | extracellular | 43.28 | 40.0 |
| KRH11881 | Soybean | extracellular | 43.51 | 39.87 |
| KRH66273 | Soybean | extracellular | 27.79 | 39.35 |
| KRH71979 | Soybean | extracellular | 38.27 | 39.25 |
| KRG96690 | Soybean | extracellular | 41.0 | 39.22 |
| KRH66276 | Soybean | extracellular | 31.21 | 38.59 |
| KRH48978 | Soybean | extracellular | 25.74 | 37.92 |
| KRH05150 | Soybean | extracellular | 23.23 | 37.92 |
| KRH23567 | Soybean | extracellular | 34.62 | 37.91 |
| KRH32949 | Soybean | extracellular | 37.81 | 37.9 |
| KRH42407 | Soybean | extracellular | 41.69 | 37.81 |
| KRH58524 | Soybean | extracellular | 41.91 | 37.55 |
| KRH14715 | Soybean | cytosol, extracellular, nucleus, plastid | 29.61 | 37.46 |
| KRH23786 | Soybean | cytosol, extracellular, nucleus, plastid | 30.52 | 37.22 |
| KRH13966 | Soybean | extracellular | 36.9 | 36.9 |
| KRG88958 | Soybean | extracellular | 29.39 | 36.34 |
| KRH23942 | Soybean | extracellular | 35.99 | 35.91 |
| KRH09740 | Soybean | extracellular | 34.4 | 35.53 |
| KRH33163 | Soybean | extracellular, plastid | 38.5 | 35.43 |
| KRH66955 | Soybean | extracellular | 37.36 | 35.34 |
| KRH39858 | Soybean | extracellular | 35.31 | 35.15 |
| KRH09752 | Soybean | extracellular | 36.45 | 34.93 |
| KRH66305 | Soybean | extracellular | 29.39 | 33.51 |
| KRG95273 | Soybean | extracellular | 37.13 | 31.17 |
| KRG99363 | Soybean | extracellular | 37.81 | 18.84 |
Protein Annotations
| Gene3D:2.160.20.10 | MapMan:21.3.5.1.3 | UniProt:A0A0R0JWQ5 | EMBL:ACUP02002786 | EnsemblPlantsGene:GLYMA_05G005800 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0071555 |
| InterPro:Glyco_hydro_28 | InterPro:IPR012334 | EnsemblPlants:KRH56581 | ProteinID:KRH56581 | ProteinID:KRH56581.1 | PFAM:PF00295 |
| ScanProsite:PS00502 | PFscan:PS51257 | PANTHER:PTHR31375 | PANTHER:PTHR31375:SF34 | InterPro:PbH1 | InterPro:Pectin_lyas_fold |
| InterPro:Pectin_lyase_fold/virulence | SMART:SM00710 | SUPFAM:SSF51126 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0006ED94C3 |
Description
hypothetical protein
Coordinates
chr5:+:508288..512615
Molecular Weight (calculated)
46996.6 Da
IEP (calculated)
7.870
GRAVY (calculated)
-0.134
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMKLNSIAL IIGIAFSVWS SSCTAARVSH WRKLKAAYAT TFNVLDYGAK GDGHADDTKA FQNAWVAACK VEGSTMVVPS GSVFLVKPIS FSGPNCEPNI
101: VFQLDGKIIA PTGSAAWGSG TLQWLEFSKL NKITIRGKGV IDGQGSVWWN NDSPTYNPTE VMLESNGRLP STKPTALRFY GSDGVTVTGI TIQNSQQTHL
201: KFDSCTNVQV SGISVSSPGD SPNTDGIHLQ NSQNVVIYSS TLACGDDCIS IQTGCSDIYV HNVNCGPGHG ISIGSLGREN TKACVRNVTV RDVTIQNTLT
301: GVRIKTWQGG SGSVQNIMFS NVQVSGVQIP ILIDQYYCDG GKCRNESSAV AVSAIHYVNI KGTYTKQPIY FACSDNLPCT GITLDTIRLE SAQETKNSNV
401: PFCWEAYGEL KTKTVPPVEC LQRGNPSKAG GINSKIDSC
101: VFQLDGKIIA PTGSAAWGSG TLQWLEFSKL NKITIRGKGV IDGQGSVWWN NDSPTYNPTE VMLESNGRLP STKPTALRFY GSDGVTVTGI TIQNSQQTHL
201: KFDSCTNVQV SGISVSSPGD SPNTDGIHLQ NSQNVVIYSS TLACGDDCIS IQTGCSDIYV HNVNCGPGHG ISIGSLGREN TKACVRNVTV RDVTIQNTLT
301: GVRIKTWQGG SGSVQNIMFS NVQVSGVQIP ILIDQYYCDG GKCRNESSAV AVSAIHYVNI KGTYTKQPIY FACSDNLPCT GITLDTIRLE SAQETKNSNV
401: PFCWEAYGEL KTKTVPPVEC LQRGNPSKAG GINSKIDSC
001: MCRLTLKCLS LNFLLLISLF SSRFGTCDAR YSVYWKGNRR SIAEGGSSGT INVLDHGAKG DGTSDDTKAF EDAWQVACKV AASTLLVPSG STFLVGPVSF
101: LGKECKEKIV FQLEGKIIAP TSASAWGSGL LQWIEFKALQ GITIKGKGII DGRGSVWWND MMGTKMPRTK PTALRFYGSN GVTVSGITIQ NSPQTHLKFD
201: NCISIQVSDF TTSSPGDSPN TDGIHLQNSQ DAVIYRSTLA CGDDCISIQT GCSNINIHDV DCGPGHGISI GGLGKDNTKA CVSNITVRDV TMHETTNGVR
301: IKSWQGGSGS VKQVMFSNIQ VSNVANPIII DQYYCDGGGC HNETSAVAVS NINYINIKGT YTKEPVRFAC SDSLPCTGIS LSTIELKPAT GKASSLDPFC
401: WKAHGELKTK TLPPIQCLKT EKSPEAASRS NNDAC
101: LGKECKEKIV FQLEGKIIAP TSASAWGSGL LQWIEFKALQ GITIKGKGII DGRGSVWWND MMGTKMPRTK PTALRFYGSN GVTVSGITIQ NSPQTHLKFD
201: NCISIQVSDF TTSSPGDSPN TDGIHLQNSQ DAVIYRSTLA CGDDCISIQT GCSNINIHDV DCGPGHGISI GGLGKDNTKA CVSNITVRDV TMHETTNGVR
301: IKSWQGGSGS VKQVMFSNIQ VSNVANPIII DQYYCDGGGC HNETSAVAVS NINYINIKGT YTKEPVRFAC SDSLPCTGIS LSTIELKPAT GKASSLDPFC
401: WKAHGELKTK TLPPIQCLKT EKSPEAASRS NNDAC
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.