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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra008748.1-P Field mustard extracellular 99.32 99.32
CDY09873 Canola extracellular 97.95 97.95
AT5G14650.1 Thale cress extracellular 88.38 89.2
KRH56581 Soybean extracellular 64.46 64.46
KRG93260 Soybean extracellular 64.92 64.33
Os01t0637500-00 Rice cytosol, extracellular 46.01 59.76
Os05t0578600-01 Rice cytosol, extracellular 42.14 59.29
VIT_14s0066g01060.t01 Wine grape extracellular 64.92 59.01
Solyc07g015870.2.1 Tomato extracellular 57.86 56.57
PGSC0003DMT400077010 Potato cytosol 59.23 56.16
HORVU3Hr1G031180.1 Barley extracellular 17.77 55.32
GSMUA_Achr4P02960_001 Banana extracellular 59.23 54.74
GSMUA_Achr5P09080_001 Banana extracellular 59.45 53.59
GSMUA_Achr6P22080_001 Banana extracellular 59.0 53.4
GSMUA_Achr1P27280_001 Banana extracellular 59.23 50.98
CDY20962 Canola extracellular, golgi, vacuole 61.05 50.47
CDY37962 Canola extracellular, golgi, vacuole 61.05 50.38
CDY20612 Canola extracellular 60.82 50.28
CDX93397 Canola extracellular, golgi, vacuole 60.82 50.09
CDY54228 Canola extracellular, golgi, vacuole 60.14 50.0
TraesCS1A01G418000.1 Wheat extracellular 57.86 49.8
CDY50367 Canola extracellular, golgi 60.36 49.44
CDY47212 Canola extracellular 60.36 49.44
HORVU3Hr1G056270.10 Barley extracellular 59.68 49.25
EES01142 Sorghum extracellular 59.45 49.06
Os01t0636500-01 Rice extracellular 59.68 48.7
TraesCS3A01G225800.2 Wheat extracellular 59.45 48.42
TraesCS1D01G425600.1 Wheat extracellular 57.86 48.2
Zm00001d044110_P001 Maize extracellular 59.45 48.16
TraesCS1B01G448100.1 Wheat extracellular 58.09 48.11
TraesCS3B01G258600.2 Wheat extracellular 58.77 48.04
TraesCS3D01G223900.1 Wheat extracellular 58.54 47.95
CDY34877 Canola extracellular, golgi 53.3 47.85
Zm00001d011444_P002 Maize extracellular 58.77 47.69
EES20001 Sorghum extracellular 58.31 47.67
Zm00001d009667_P001 Maize extracellular, mitochondrion, plastid 55.13 46.9
HORVU1Hr1G091430.5 Barley extracellular 58.09 46.03
CDY67535 Canola extracellular 31.44 44.37
CDX83631 Canola extracellular 44.42 41.4
CDY13645 Canola extracellular 44.19 41.28
CDX93644 Canola extracellular 43.74 40.68
CDY43307 Canola extracellular 43.74 40.59
CDX95284 Canola extracellular 36.9 40.1
CDY04708 Canola plastid 25.06 39.71
CDY41695 Canola extracellular 38.95 39.31
CDX89966 Canola extracellular 43.05 38.49
CDY15246 Canola extracellular 43.05 38.49
CDY50769 Canola extracellular 29.61 38.01
CDY69377 Canola extracellular 34.62 38.0
CDY54292 Canola cytosol 38.5 37.89
CDX77909 Canola extracellular 42.37 37.88
CDY25786 Canola cytosol 38.04 37.44
CDY57689 Canola extracellular 38.04 37.36
CDY39404 Canola extracellular 33.94 37.34
CDX79907 Canola extracellular 36.9 37.24
CDX67693 Canola extracellular 36.67 37.18
CDX72025 Canola extracellular 36.45 37.04
CDY48768 Canola extracellular 36.67 37.01
CDX73440 Canola extracellular 33.71 37.0
CDY39399 Canola extracellular 33.71 37.0
CDY54312 Canola extracellular 37.36 36.94
CDY11585 Canola extracellular 38.95 36.62
CDY56952 Canola extracellular 35.08 36.58
CDY14791 Canola extracellular 35.99 36.49
CDY47139 Canola extracellular 38.72 36.4
CDY28005 Canola extracellular 34.85 36.34
CDY35976 Canola extracellular 34.85 36.34
CDY06902 Canola extracellular 35.76 36.26
CDX74418 Canola extracellular 34.85 36.26
CDY07963 Canola extracellular 35.99 36.07
CDY47032 Canola extracellular 32.8 35.73
CDX74019 Canola extracellular 35.54 35.7
CDX72553 Canola extracellular 32.57 35.48
CDY38648 Canola cytosol 29.61 34.76
CDX85471 Canola extracellular 32.12 34.73
CDY37571 Canola cytosol 29.39 34.49
CDY44150 Canola extracellular, golgi, plastid 38.5 33.67
CDY02729 Canola extracellular 32.35 33.18
CDX75843 Canola extracellular 33.94 32.89
CDY71357 Canola extracellular, vacuole 23.46 32.49
CDY58462 Canola extracellular 33.49 32.45
CDY30105 Canola extracellular 32.57 31.85
CDX97703 Canola extracellular 32.57 31.64
CDX97704 Canola extracellular 32.8 31.58
CDY30107 Canola extracellular 32.57 31.36
CDY41445 Canola endoplasmic reticulum 39.64 31.3
CDY16952 Canola extracellular 30.75 31.11
CDX75239 Canola cytosol 28.7 31.03
CDX68839 Canola cytosol 28.7 31.03
CDX69397 Canola extracellular 27.56 29.95
CDY39884 Canola extracellular 29.61 29.21
CDY61868 Canola extracellular 35.76 28.6
CDY06100 Canola extracellular 25.28 26.0
Protein Annotations
Gene3D:2.160.20.10MapMan:21.3.5.1.3GO:A0A078C091EnsemblPlants:CDX69569ProteinID:CDX69569ProteinID:CDX69569.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00135578001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31375PANTHER:PTHR31375:SF34InterPro:PbH1InterPro:Pectin_lyas_fold
InterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EDDC1FSEG:seg
Description
BnaA10g19180D
Coordinates
chrLK031790:-:855818..857770
Molecular Weight (calculated)
47220.6 Da
IEP (calculated)
5.880
GRAVY (calculated)
-0.279
Length
439 amino acids
Sequence
(BLAST)
001: MYSLTLKCLA LKLLLLISCD ARHSVYWRGN RRSIAEGGSS GTFNVLDYGA KGDGTSDDTK AFEDAWNEAC KVAASTLLVP SGSTFLVGPV SFLGKECKEN
101: IVFQLDGKII APTSSSAWGS GLLQWMEFKS LTGITIKGKG VIDGQGSVWW NKSPDYDPAD ENDMMKDRKG TKMPRTKPTA LRFYGSNGVM VNGITIQNSP
201: QTHLKFDNCV NIQVSDFTTS SPGDSPNTDG IHLQNSQDAV IYRSTLACGD DCISIQTGCS NIYIHDVDCG PGHGISIGGL GKENTKACVS NITVRDVTMH
301: ETTNGVRIKS WQGGSGSVKQ VMFSNIQVSE VANPIVIDQY YCDGGGCHNE TSAVAVSNIN YINIKGTYTR EPVRFACSDS LPCTGISLST IELKPATDKA
401: SSSEPFCWEA HGELKTETLP PIQCLKTEKS TSQSSNDAC
Best Arabidopsis Sequence Match ( AT5G14650.1 )
(BLAST)
001: MCRLTLKCLS LNFLLLISLF SSRFGTCDAR YSVYWKGNRR SIAEGGSSGT INVLDHGAKG DGTSDDTKAF EDAWQVACKV AASTLLVPSG STFLVGPVSF
101: LGKECKEKIV FQLEGKIIAP TSASAWGSGL LQWIEFKALQ GITIKGKGII DGRGSVWWND MMGTKMPRTK PTALRFYGSN GVTVSGITIQ NSPQTHLKFD
201: NCISIQVSDF TTSSPGDSPN TDGIHLQNSQ DAVIYRSTLA CGDDCISIQT GCSNINIHDV DCGPGHGISI GGLGKDNTKA CVSNITVRDV TMHETTNGVR
301: IKSWQGGSGS VKQVMFSNIQ VSNVANPIII DQYYCDGGGC HNETSAVAVS NINYINIKGT YTKEPVRFAC SDSLPCTGIS LSTIELKPAT GKASSLDPFC
401: WKAHGELKTK TLPPIQCLKT EKSPEAASRS NNDAC
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LYJ5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.