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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra018707.1-P Field mustard extracellular 99.15 99.36
CDX93644 Canola extracellular 99.15 99.36
AT1G48100.1 Thale cress extracellular 91.12 90.74
KRH36916 Soybean extracellular, nucleus 71.67 71.52
KRH11881 Soybean extracellular 72.3 71.4
VIT_05s0020g00420.t01 Wine grape extracellular 71.67 71.07
Os05t0279900-00 Rice cytosol 44.82 67.3
KRH42407 Soybean extracellular 68.29 66.74
GSMUA_Achr8P06220_001 Banana extracellular 65.96 66.67
KRH58524 Soybean extracellular 68.08 65.71
PGSC0003DMT400075723 Potato extracellular 67.02 65.23
Solyc04g008230.2.1 Tomato nucleus 67.44 65.1
GSMUA_Achr8P22240_001 Banana extracellular 61.73 61.22
TraesCS7B01G230600.1 Wheat extracellular 59.83 58.11
TraesCS7A01G330000.1 Wheat extracellular 59.83 57.99
TraesCS7D01G326800.1 Wheat extracellular 59.83 57.99
HORVU7Hr1G078960.2 Barley extracellular 59.62 57.67
CDY67535 Canola extracellular 36.58 55.63
CDY41695 Canola extracellular 47.78 51.95
Zm00001d040725_P002 Maize extracellular, vacuole 54.97 51.79
CDX77909 Canola extracellular 53.7 51.73
CDX95284 Canola extracellular 43.97 51.49
KXG32428 Sorghum mitochondrion 54.97 50.0
CDX89966 Canola extracellular 51.59 49.69
CDY15246 Canola extracellular 51.59 49.69
CDY71357 Canola extracellular, vacuole 31.08 46.37
CDY09873 Canola extracellular 40.59 43.74
CDX69569 Canola extracellular 40.59 43.74
CDY20612 Canola extracellular 43.97 39.17
CDY20962 Canola extracellular, golgi, vacuole 43.76 38.98
CDY13645 Canola extracellular 38.69 38.94
CDX83631 Canola extracellular 38.69 38.85
CDY54228 Canola extracellular, golgi, vacuole 43.34 38.83
CDX93397 Canola extracellular, golgi, vacuole 43.55 38.65
CDY37962 Canola extracellular, golgi, vacuole 43.34 38.53
CDY50367 Canola extracellular, golgi 43.13 38.06
CDY47212 Canola extracellular 43.13 38.06
KXG32426 Sorghum extracellular 55.18 37.72
CDX72025 Canola extracellular 34.25 37.5
CDY54312 Canola extracellular 34.88 37.16
CDY34877 Canola extracellular, golgi 38.27 37.01
CDX67693 Canola extracellular 33.62 36.72
CDY57689 Canola extracellular 34.67 36.69
CDY06902 Canola extracellular 33.4 36.49
CDY14791 Canola extracellular 33.4 36.49
CDY37571 Canola cytosol 28.54 36.1
CDY38648 Canola cytosol 28.33 35.83
CDY04708 Canola plastid 20.93 35.74
CDY48768 Canola extracellular 32.77 35.63
CDY56952 Canola extracellular 31.71 35.63
CDY07963 Canola extracellular 32.98 35.62
CDX74418 Canola extracellular 31.71 35.55
CDY11585 Canola extracellular 34.88 35.33
CDY47139 Canola extracellular 34.88 35.33
CDY25786 Canola cytosol 33.19 35.2
CDX79907 Canola extracellular 32.35 35.17
CDY35976 Canola extracellular 31.29 35.15
CDY28005 Canola extracellular 31.29 35.15
CDX74019 Canola extracellular 32.35 35.01
CDY54292 Canola cytosol 32.98 34.98
Zm00001d009167_P001 Maize extracellular 55.39 34.2
Os01t0329300-01 Rice plastid 54.76 34.12
CDX85471 Canola extracellular 28.54 33.25
CDY44150 Canola extracellular, golgi, plastid 35.1 33.07
CDY69377 Canola extracellular 27.91 33.0
CDY39404 Canola extracellular 27.48 32.58
CDY02729 Canola extracellular 29.39 32.48
CDX73440 Canola extracellular 26.85 31.75
CDY50769 Canola extracellular 22.83 31.58
CDY47032 Canola extracellular 26.85 31.51
CDY39399 Canola extracellular 26.64 31.5
CDX72553 Canola extracellular 26.64 31.27
CDY30105 Canola extracellular 29.6 31.18
CDX75843 Canola extracellular 29.81 31.13
CDY58462 Canola extracellular 29.6 30.91
CDX75239 Canola cytosol 26.43 30.79
CDX97703 Canola extracellular 29.39 30.75
CDX68839 Canola cytosol 26.22 30.54
CDX97704 Canola extracellular 29.39 30.48
CDY30107 Canola extracellular 29.18 30.26
CDY16952 Canola extracellular 27.48 29.95
CDY41445 Canola endoplasmic reticulum 34.46 29.32
CDX69397 Canola extracellular 24.31 28.47
CDY61868 Canola extracellular 32.56 28.05
CDY06100 Canola extracellular 24.31 26.93
CDY39884 Canola extracellular 25.16 26.74
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078HZJ5UniProt:A0A078HZJ5EnsemblPlants:CDY43307ProteinID:CDY43307
ProteinID:CDY43307.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016787GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00076350001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF26InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126TMHMM:TMhelixUniParc:UPI0004EE3F56
SEG:seg:::::
Description
BnaC06g01610DBnaC06g01610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZJ5]
Coordinates
chrLK032551:-:257255..260084
Molecular Weight (calculated)
50895.9 Da
IEP (calculated)
4.516
GRAVY (calculated)
-0.190
Length
473 amino acids
Sequence
(BLAST)
001: MRILSGILVV YLISTLLFGQ LIYVARGRFH YHKRRGLSDP PPPPPPAVTA NPPQVPSDPY PNPNPDPAPG DSDSGCIFDV TSFGAVGDGS CDDTAAFKAA
101: WKAACAVESS VVLAPEGGVF KITSTIFSGP CKPGLVFQLD GVLMPPDGPE EWPEKDSKSQ WLVFYRLDGF TFAGKGTVEG NGQKWWDLPC KPHRGPDGSS
201: SSEPCVSPTM IRFFMSNNIE VGGLRIQNSP QFHMKFDGCE GVSINDIQIS SPKLSPNTDG IHLGNTRSVA IHNSVVSNGD DCISIGTGCS DIDIQGVTCG
301: PSHGISIGSL GVHNSQACVS NITVRNTVIR DSDNGLRVKT WQGGTGSVSN LLFENIQMEN VLNCIIVDQY YCQSKDCRNE TSAVRVFDVQ YRNIKGTYDV
401: RSAPIHFACS DTVACTNITM SEVELLPEEG ELVDDPFCWN AYGTQETLTI PPIDCLLDGS PVVEEGYNSN PGC
Best Arabidopsis Sequence Match ( AT1G48100.1 )
(BLAST)
001: MRRLSGILVI YIISTVLFGH FTNVARARYH YHKGRHGVTH PLPPPPPPPL ETANPPDQVP SDPYPSPDPA PGDSDSGCVF DVTSFGAVGD GSCDDTAAFQ
101: DAWKAACAVE SGVVLAPEGG VFKITSTIFS GPCKPGLVFQ LDGVLMPPDG PEEWPEKDNK NQWLVFYRLD GFTFSGKGTV EGNGQKWWDL PCKPHRGPDG
201: SSSSGPCASP TMIRFFMSNN IEVKGLRIQN SPQFHMKFDG CQGVLINEIQ ISSPKLSPNT DGIHLGNTRS VGIYNSVVSN GDDCISIGTG CSDVDIQGVT
301: CGPSHGISIG SLGVHNSQAC VSNITVRNTV IRDSDNGLRV KTWQGGTGSV SNLLFENIQM ENVLNCIIVD QYYCQSKDCR NETSAVKVFD VEYRNIKGTY
401: DVRSPPIHFA CSDTVACTNI TMSEVELLPE EGELVDDPFC WNAYGKQETL TIPPIDCLLD GSPVVEEAYD SNYGC
Arabidopsis Description
Polygalacturonase At1g48100 [Source:UniProtKB/Swiss-Prot;Acc:Q949Z1]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.