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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX85471 Canola extracellular 90.65 95.57
CDY16952 Canola extracellular 74.3 73.27
AT5G17200.1 Thale cress extracellular 70.56 71.73
CDX69397 Canola extracellular 67.52 71.53
CDY50769 Canola extracellular 35.05 43.86
CDY39404 Canola extracellular 40.42 43.36
PGSC0003DMT400056828 Potato extracellular 40.19 43.22
PGSC0003DMT400008955 Potato extracellular 34.81 42.82
CDY69377 Canola extracellular 39.95 42.75
CDY47032 Canola extracellular 39.25 41.69
CDX72553 Canola extracellular 39.25 41.69
CDY39399 Canola extracellular 38.78 41.5
CDX73440 Canola extracellular 38.55 41.25
CDX79907 Canola extracellular 39.25 38.62
CDY56952 Canola extracellular 37.85 38.48
CDY48768 Canola extracellular 38.78 38.16
CDX74418 Canola extracellular 37.62 38.15
TraesCS2A01G405600.1 Wheat extracellular 28.27 37.93
CDX72025 Canola extracellular 38.08 37.73
CDY14791 Canola extracellular 38.08 37.64
TraesCS2D01G402300.1 Wheat extracellular 29.21 37.54
CDX75843 Canola extracellular 39.72 37.53
CDX68839 Canola cytosol 35.51 37.44
CDX75239 Canola cytosol 35.51 37.44
CDY06902 Canola extracellular 37.85 37.41
TraesCS2B01G423400.1 Wheat plastid 30.61 37.32
CDY58462 Canola extracellular 39.49 37.31
CDY30105 Canola extracellular 39.02 37.19
TraesCS2B01G423300.1 Wheat extracellular 34.81 37.16
CDX97704 Canola extracellular 39.49 37.06
CDY30107 Canola extracellular 39.49 37.06
TraesCS2A01G405300.1 Wheat extracellular, nucleus 35.05 37.04
GSMUA_Achr11P... Banana extracellular 35.98 37.02
CDX67693 Canola extracellular 37.38 36.95
GSMUA_Achr9P22320_001 Banana extracellular 35.51 36.8
CDX97703 Canola extracellular 38.78 36.73
TraesCS2D01G402200.1 Wheat extracellular 33.41 36.57
CDX74019 Canola extracellular 36.92 36.16
CDY37571 Canola cytosol 31.54 36.1
CDY07963 Canola extracellular 36.92 36.07
TraesCS2D01G402100.1 Wheat extracellular 34.11 36.05
HORVU2Hr1G096130.1 Barley extracellular 34.11 36.05
GSMUA_Achr4P13200_001 Banana extracellular 35.51 36.02
CDY28005 Canola extracellular 35.28 35.87
CDY35976 Canola extracellular 35.28 35.87
CDY38648 Canola cytosol 31.07 35.56
TraesCS2A01G405100.1 Wheat extracellular 34.58 35.49
KXG26899 Sorghum extracellular 34.81 35.48
CDY39884 Canola extracellular 35.51 34.16
CDY54312 Canola extracellular 35.05 33.78
CDY57689 Canola extracellular 35.28 33.78
TraesCS2B01G423200.1 Wheat extracellular 33.41 33.65
TraesCS2D01G402000.1 Wheat extracellular 33.64 33.64
CDY41695 Canola extracellular 33.41 32.87
CDY09873 Canola extracellular 33.41 32.57
CDX95284 Canola extracellular 30.61 32.43
CDX69569 Canola extracellular 33.18 32.35
CDY04708 Canola plastid 20.79 32.13
Zm00001d039668_P001 Maize plastid 30.61 29.98
CDX93644 Canola extracellular 32.48 29.45
CDY43307 Canola extracellular 32.48 29.39
CDY25786 Canola cytosol 30.61 29.37
CDY54292 Canola cytosol 30.61 29.37
CDY13645 Canola extracellular 32.01 29.15
CDY47139 Canola extracellular 31.54 28.91
CDY11585 Canola extracellular 31.31 28.69
CDX83631 Canola extracellular 31.54 28.66
CDY67535 Canola extracellular 20.56 28.3
CDY61868 Canola extracellular 35.98 28.05
CDY44150 Canola extracellular, golgi, plastid 32.71 27.89
CDY06100 Canola extracellular 27.8 27.87
CDX77909 Canola extracellular 31.54 27.49
Os01t0172900-00 Rice nucleus 18.69 27.12
CDX89966 Canola extracellular 31.07 27.09
CDY15246 Canola extracellular 30.61 26.68
CDY71357 Canola extracellular, vacuole 19.63 26.5
CDY54228 Canola extracellular, golgi, vacuole 31.78 25.76
CDY37962 Canola extracellular, golgi, vacuole 32.01 25.75
CDX93397 Canola extracellular, golgi, vacuole 31.78 25.52
CDY20612 Canola extracellular 31.31 25.24
CDY20962 Canola extracellular, golgi, vacuole 31.31 25.24
CDY34877 Canola extracellular, golgi 28.74 25.15
CDY41445 Canola endoplasmic reticulum 31.54 24.28
CDY47212 Canola extracellular 29.67 23.69
CDY50367 Canola extracellular, golgi 29.44 23.51
GSMUA_Achr4P06370_001 Banana extracellular 34.11 19.36
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078EPX8EnsemblPlants:CDY02729ProteinID:CDY02729ProteinID:CDY02729.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00114883001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF42InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EE6E09
SEG:seg:::::
Description
BnaC02g07060D
Coordinates
chrLK031936:+:1099561..1101590
Molecular Weight (calculated)
46179.9 Da
IEP (calculated)
9.098
GRAVY (calculated)
-0.219
Length
428 amino acids
Sequence
(BLAST)
001: MNKSLLFFVF LCLLIQISKL GFCLERKAHN GNNGLKRHGF ISVTSFGAVG DGKADDTKAF LKAWKAACKG GSRGKTNFLV PLGKTFMLKP LTFEGPCKSS
101: SITFLIRGNL VAPGYTWHAG NYPAWISFGS INGLVVTGGG TVNGRGSVWW RNVQHRPTAM HFNNCNGLHI SNLHHLNSPR NHISLSCSEN ISLSGLNMTA
201: PGDSPNTDGI DISNCRGVDI RDSVIATGDD CIAINGGSSY INITGIFCGP GHGISVGSLG ENGHFSAVEE VRVKNCTLSN TKNGVRIKTF QNGSGFARKI
301: SFEEIKMVAS ENPIIIEQNY HDRAKNGDVS FEYSNYQSCR VNRLYQTLSG SGNGRGVRVS DVRYSRIHGS SASSEAITMN CDANLGCVDI VMDHVDLVSA
401: KSGHKVSASC KNVHGKYFDS DISCQKKH
Best Arabidopsis Sequence Match ( AT5G17200.1 )
(BLAST)
001: MKSSLFFVLL CLFQINKLCF CLEEESLKVK NGFGSNGFIS VTSFGAIGDG KTDDTKAFLK AWEAVCKGGH NRKILVPQGK TFMLKPLTFI GPCKSSTISL
101: SIRGNLVAPG YTWYAGRYTT WISFDSINGL VVTGGGTIDG RGSLWWGNVN NRPCAMHFNN CNGLRISNLR HLNSPRNHVG LSCSQNIEVR GLRMTAPGDS
201: PNTDGIDISN CIGVHIHDSV IATGDDCIAI NSGSSHINIT GIFCGPGHGI SVGSLGVTGD FETVEEVRVK NCTFTKTQNG VRIKTYQNGS GYARKISFED
301: INMVASENPI IIDQTYHNGG TNGGISKSSS SYQNCHLTAK QRTPSGNGKG VKVTDVRYAR IRGSSASDQD ITLNCDADLG CSDIVMDNVN MVSATFGHKL
401: FSSCKNAHGS LFASKVDCLK H
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FFI9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.