Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39404 Canola extracellular 94.25 94.49
CDY50769 Canola extracellular 77.0 90.06
CDY39399 Canola extracellular 89.75 89.75
CDX73440 Canola extracellular 87.5 87.5
AT5G44830.1 Thale cress extracellular 62.0 74.7
AT5G44840.1 Thale cress extracellular 72.75 74.42
CDX72553 Canola extracellular 56.25 55.83
CDY47032 Canola extracellular 56.25 55.83
CDX85471 Canola extracellular 42.75 42.12
PGSC0003DMT400056828 Potato extracellular 41.5 41.71
PGSC0003DMT400008955 Potato extracellular 35.5 40.8
CDY58462 Canola extracellular 45.5 40.18
TraesCS2D01G402100.1 Wheat extracellular 40.5 40.0
CDX75843 Canola extracellular 45.25 39.96
CDY02729 Canola extracellular 42.75 39.95
TraesCS2B01G423300.1 Wheat extracellular 40.0 39.9
TraesCS2A01G405300.1 Wheat extracellular, nucleus 40.0 39.51
CDY30107 Canola extracellular 45.0 39.47
CDX97704 Canola extracellular 45.0 39.47
CDY30105 Canola extracellular 44.25 39.42
TraesCS2B01G423400.1 Wheat plastid 34.5 39.32
CDX97703 Canola extracellular 44.25 39.16
HORVU2Hr1G096130.1 Barley extracellular 39.5 39.01
TraesCS2D01G402200.1 Wheat extracellular 38.0 38.87
CDY16952 Canola extracellular 42.0 38.71
TraesCS2A01G405100.1 Wheat extracellular 40.0 38.37
TraesCS2A01G405600.1 Wheat extracellular 30.5 38.24
KXG26899 Sorghum extracellular 39.75 37.86
TraesCS2D01G402300.1 Wheat extracellular 31.5 37.84
TraesCS2B01G423200.1 Wheat extracellular 39.75 37.41
CDX68839 Canola cytosol 37.75 37.19
CDX75239 Canola cytosol 37.75 37.19
CDX69397 Canola extracellular 37.5 37.13
CDY39884 Canola extracellular 41.25 37.08
GSMUA_Achr11P... Banana extracellular 38.25 36.78
TraesCS2D01G402000.1 Wheat extracellular 39.25 36.68
CDY56952 Canola extracellular 38.5 36.58
KRH05150 Soybean extracellular 24.5 36.43
CDX74418 Canola extracellular 38.25 36.26
GSMUA_Achr9P22320_001 Banana extracellular 36.5 35.35
CDY37571 Canola cytosol 33.0 35.29
CDY54312 Canola extracellular 39.0 35.14
CDY38648 Canola cytosol 32.75 35.03
CDY57689 Canola extracellular 38.75 34.68
CDX69569 Canola extracellular 38.0 34.62
CDY09873 Canola extracellular 38.0 34.62
GSMUA_Achr4P13200_001 Banana extracellular 36.5 34.6
CDY14791 Canola extracellular 37.25 34.41
CDY06902 Canola extracellular 37.0 34.18
CDX74019 Canola extracellular 36.75 33.64
CDX72025 Canola extracellular 36.0 33.33
CDY07963 Canola extracellular 36.5 33.33
CDX67693 Canola extracellular 36.0 33.26
CDY04708 Canola plastid 23.0 33.21
Zm00001d039668_P001 Maize plastid 36.25 33.18
CDX79907 Canola extracellular 36.0 33.1
CDY48768 Canola extracellular 36.0 33.1
CDY35976 Canola extracellular 34.75 33.02
CDY28005 Canola extracellular 34.75 33.02
CDY41695 Canola extracellular 34.25 31.49
CDY54292 Canola cytosol 35.0 31.39
CDY25786 Canola cytosol 34.75 31.17
CDX95284 Canola extracellular 31.0 30.69
CDY11585 Canola extracellular 35.25 30.19
CDY47139 Canola extracellular 35.25 30.19
CDY67535 Canola extracellular 23.25 29.9
CDY13645 Canola extracellular 34.25 29.15
CDX83631 Canola extracellular 34.25 29.09
CDX77909 Canola extracellular 35.0 28.51
CDY44150 Canola extracellular, golgi, plastid 35.75 28.49
CDY71357 Canola extracellular, vacuole 22.5 28.39
CDX93644 Canola extracellular 33.0 27.97
CDY43307 Canola extracellular 33.0 27.91
CDY20612 Canola extracellular 37.0 27.87
CDY20962 Canola extracellular, golgi, vacuole 36.75 27.68
CDX89966 Canola extracellular 33.75 27.49
CDY15246 Canola extracellular 33.75 27.49
Os01t0172900-00 Rice nucleus 20.25 27.46
CDX93397 Canola extracellular, golgi, vacuole 36.5 27.39
CDY37962 Canola extracellular, golgi, vacuole 36.25 27.26
CDY54228 Canola extracellular, golgi, vacuole 35.5 26.89
CDY47212 Canola extracellular 36.0 26.87
CDY50367 Canola extracellular, golgi 36.0 26.87
CDY34877 Canola extracellular, golgi 31.75 25.97
CDY41445 Canola endoplasmic reticulum 36.0 25.9
CDY61868 Canola extracellular 34.25 24.95
CDY06100 Canola extracellular 25.25 23.65
GSMUA_Achr4P06370_001 Banana extracellular 38.25 20.29
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078JV57UniProt:A0A078JV57EnsemblPlants:CDY69377ProteinID:CDY69377
ProteinID:CDY69377.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016787GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00087063001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF42InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126TMHMM:TMhelixUniParc:UPI0004EEB42E
Description
BnaCnng63250DBnaCnng63250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JV57]
Coordinates
chrLK039274:-:1161..4027
Molecular Weight (calculated)
43592.7 Da
IEP (calculated)
5.833
GRAVY (calculated)
-0.180
Length
400 amino acids
Sequence
(BLAST)
001: MKSSYLRHRM EIIVRVVFVL TLVNFGFVNG QIYDVLKFGA EGDGTTDDSK AFVEAWKAMC SSGGSNKTLL IPSDNTFLLQ PLVFQGPCNS PSVQVQLDGK
101: IVAPLNKAAW SDLKSYEWVS FHKIIGLTVL GSGTINGRGS SFWEANMPAS KRPTQLHFKG CNNLEINGIT SFDSPRNHIS IRDCRQVKIT QIKIIAPGDS
201: PNTDGIDIST STDVEIYDTI VGTGDDCVAL NSGSININIT RMQCGPGHGI SVGSLGRDGE ESIVENVQVT NCTFNETTNG ARIKTWPNGK GYARNIVFKD
301: ITLTETQNPI IIDQHYIDKG HIHVEESSAV AISNVIFTNI HGTSQKDEII KIDCSDVTSC KDIVLDRIDI TTFDGNKPLI ECSNAYGKST NAYDGCLKAQ
Best Arabidopsis Sequence Match ( AT5G44840.1 )
(BLAST)
001: MEIILRGVFL LTLLHSILVN GQIYDVLEFG ADGNGITDDS KAFVKAWSAM CGSGGNSKTF IIPSNKTFLL QPLTFQGPCK SPSVQVKFDG KIVAPINKAA
101: WSDYKLFRWV SFKEIIGLTV NGSGTIHGRG SSFWKQGLPA SKRPTQLHFQ RCNDLMITGI TSFNSPKNHI SISECKRVKI TKIKLVAPHD SPNTDGINIS
201: ESSDVDIYDT VIGTGDDCVA INSGSMNINI ARMNCGPGHG ISVGSVGRDG EESIVENVQV TNCTFIRTDN GARIKTWPNG KGYAKNILFK SLTFRETKNP
301: IIIDQNYVDK GRLDVEESAV AISNVTFTDL RGTSKLDEII KIDCSKVTYC KDIVLDKIDI ATVDGNKPIV ECSNVYGKSI NANEANGCFK T
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:TAIR;Acc:AT5G44840]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.