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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY58462 Canola extracellular 98.01 98.01
CDX97704 Canola extracellular 85.87 85.31
CDY30107 Canola extracellular 85.65 85.09
CDY30105 Canola extracellular 83.44 84.19
CDX97703 Canola extracellular 82.56 82.74
AT3G15720.1 Thale cress extracellular 79.91 79.39
CDY50769 Canola extracellular 34.44 45.61
CDY69377 Canola extracellular 39.96 45.25
CDY39404 Canola extracellular 39.74 45.11
CDX72553 Canola extracellular 39.74 44.66
CDX73440 Canola extracellular 39.29 44.5
CDY39399 Canola extracellular 39.07 44.25
VIT_09s0002g06610.t01 Wine grape extracellular 37.97 44.22
VIT_09s0002g06650.t01 Wine grape extracellular 39.07 43.81
CDY47032 Canola extracellular 38.85 43.67
VIT_09s0002g06580.t01 Wine grape cytosol 37.09 42.97
CDX85471 Canola extracellular 37.75 42.12
PGSC0003DMT400056828 Potato extracellular 36.87 41.96
KRH23567 Soybean extracellular 36.42 41.15
CDY37571 Canola cytosol 33.77 40.91
PGSC0003DMT400008955 Potato extracellular 31.35 40.8
CDY16952 Canola extracellular 39.07 40.78
CDY38648 Canola cytosol 33.55 40.64
KXG26899 Sorghum extracellular 37.09 40.0
CDY02729 Canola extracellular 37.53 39.72
TraesCS2B01G423300.1 Wheat extracellular 34.88 39.4
Solyc03g116580.2.1 Tomato extracellular 37.97 39.36
KRH09740 Soybean extracellular 36.64 39.06
GSMUA_Achr11P... Banana extracellular 35.76 38.94
CDX69397 Canola extracellular 34.44 38.61
HORVU2Hr1G096130.1 Barley extracellular 34.22 38.27
TraesCS2D01G402100.1 Wheat extracellular 34.22 38.27
TraesCS2A01G405300.1 Wheat extracellular, nucleus 34.22 38.27
TraesCS2B01G423400.1 Wheat plastid 29.36 37.89
TraesCS2A01G405100.1 Wheat extracellular 34.88 37.89
GSMUA_Achr9P22320_001 Banana extracellular 34.22 37.53
TraesCS2A01G405600.1 Wheat extracellular 26.27 37.3
GSMUA_Achr4P13200_001 Banana extracellular 34.66 37.2
CDY04708 Canola plastid 22.74 37.18
TraesCS2D01G402200.1 Wheat extracellular 32.01 37.08
TraesCS2B01G423200.1 Wheat extracellular 34.66 36.94
CDY56952 Canola extracellular 34.0 36.58
CDY28005 Canola extracellular 34.0 36.58
CDY48768 Canola extracellular 35.1 36.55
TraesCS2D01G402000.1 Wheat extracellular 34.44 36.45
CDY35976 Canola extracellular 33.77 36.34
CDX79907 Canola extracellular 34.88 36.32
CDX74418 Canola extracellular 33.77 36.26
CDY14791 Canola extracellular 34.44 36.03
CDX74019 Canola extracellular 34.66 35.93
CDY07963 Canola extracellular 34.66 35.84
CDY06902 Canola extracellular 34.22 35.8
TraesCS2D01G402300.1 Wheat extracellular 26.27 35.74
CDX67693 Canola extracellular 34.0 35.57
CDX68839 Canola cytosol 31.57 35.22
CDX75239 Canola cytosol 31.57 35.22
CDY39884 Canola extracellular 34.22 34.83
CDX72025 Canola extracellular 33.11 34.72
CDY41695 Canola extracellular 32.89 34.25
CDY09873 Canola extracellular 33.11 34.17
CDX69569 Canola extracellular 32.89 33.94
CDX95284 Canola extracellular 30.24 33.91
CDY54312 Canola extracellular 33.11 33.78
CDY57689 Canola extracellular 32.89 33.33
CDY25786 Canola cytosol 32.67 33.18
CDY11585 Canola extracellular 34.0 32.98
CDY54292 Canola cytosol 32.45 32.96
CDY67535 Canola extracellular 22.52 32.8
CDY47139 Canola extracellular 33.77 32.76
Zm00001d039668_P001 Maize plastid 30.24 31.35
CDY44150 Canola extracellular, golgi, plastid 34.66 31.27
CDX83631 Canola extracellular 32.45 31.21
CDY13645 Canola extracellular 32.23 31.06
CDX77909 Canola extracellular 32.67 30.14
CDY71357 Canola extracellular, vacuole 20.97 29.97
CDX93644 Canola extracellular 31.13 29.87
CDY43307 Canola extracellular 31.13 29.81
CDX89966 Canola extracellular 32.23 29.74
CDY15246 Canola extracellular 31.79 29.33
CDY41445 Canola endoplasmic reticulum 34.22 27.88
Os01t0172900-00 Rice nucleus 17.88 27.46
CDY61868 Canola extracellular 32.89 27.14
CDY20962 Canola extracellular, golgi, vacuole 30.91 26.37
CDY54228 Canola extracellular, golgi, vacuole 30.68 26.33
CDY37962 Canola extracellular, golgi, vacuole 30.91 26.32
CDY20612 Canola extracellular 30.68 26.18
CDX93397 Canola extracellular, golgi, vacuole 30.68 26.08
CDY34877 Canola extracellular, golgi 28.04 25.97
CDY47212 Canola extracellular 29.58 25.0
CDY50367 Canola extracellular, golgi 29.58 25.0
CDY06100 Canola extracellular 23.4 24.82
GSMUA_Achr4P06370_001 Banana extracellular 33.77 20.29
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078CL99EnsemblPlants:CDX75843ProteinID:CDX75843ProteinID:CDX75843.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00123813001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF42InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EE7D05
Description
BnaC03g39260D
Coordinates
chrLK031805:-:1101863..1104067
Molecular Weight (calculated)
48517.4 Da
IEP (calculated)
5.229
GRAVY (calculated)
-0.053
Length
453 amino acids
Sequence
(BLAST)
001: MQKKTWILNF SVFFLHIFTS SRALDVSQYG AIGDGVTDDS QAFLKAWEAV CIGTGDGQLI VPAGMTFVLQ PLKFQGSCKS TPIVVQILGN MVASSRGNWE
101: GDKDQWILFS DIEGLVVEGN GVINGQGSSW WEHKGSSRPT ALKFKSCNNL RLSGLTHVDS AKAHIHINNC NGVSISNLRI NAPESSPNTD GIDVAASSNV
201: IIQDCVIATG DDCIAINSGT SNIRVSGIDC GPGHGISIGS LGKDGETASV EDICVQNCNF RGTTNGARIK TWPGGSGYAR RITFSGITLD NVENPIIIDQ
301: HYNNGGSEKN TDDKSSAVEV SKVVYSNFVG TSKSEYGVDF RCSAAVPCTE IFMKDVRIET PSSGSGQVAQ GQCFNVRGVS TLAVPGLECL ALSTDMLSSA
401: ELPEQTCMLP QPSVQPSTRP MQDPFWVYGS GGKRLRVFDV VLTSFIFVVL YMY
Best Arabidopsis Sequence Match ( AT3G15720.1 )
(BLAST)
001: MKKKTWFLNF SLFFLQIFTS SNALDVTQFG AVGDGVTDDS QAFLKAWEAV CSGTGDGQFV VPAGMTFMLQ PLKFQGSCKS TPVFVQMLGK LVAPSKGNWK
101: GDKDQWILFT DIEGLVIEGD GEINGQGSSW WEHKGSRPTA LKFRSCNNLR LSGLTHLDSP MAHIHISECN YVTISSLRIN APESSPNTDG IDVGASSNVV
201: IQDCIIATGD DCIAINSGTS NIHISGIDCG PGHGISIGSL GKDGETATVE NVCVQNCNFR GTMNGARIKT WQGGSGYARM ITFNGITLDN VENPIIIDQF
301: YNGGDSDNAK DRKSSAVEVS KVVFSNFIGT SKSEYGVDFR CSERVPCTEI FLRDMKIETA SSGSGQVAQG QCLNVRGAST IAVPGLECLE LSTDMFSSAQ
401: LLEQTCMSAQ SVQPRTTTQP MQDPIWVFQS RGKQLRVYNI AILVSFISLV TYILAR
Arabidopsis Description
Probable polygalacturonase At3g15720 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW07]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.