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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY06902 Canola extracellular 98.61 98.61
CDX79907 Canola extracellular 87.76 87.36
CDY48768 Canola extracellular 87.76 87.36
AT2G41850.1 Thale cress extracellular 83.6 83.6
CDX72025 Canola extracellular 70.21 70.37
CDX67693 Canola extracellular 67.21 67.21
KRH71979 Soybean extracellular 55.2 55.84
VIT_08s0007g07750.t01 Wine grape extracellular 54.27 53.17
VIT_08s0007g07760.t01 Wine grape extracellular 53.35 53.1
Solyc04g015530.1.1 Tomato cytosol 47.81 52.81
VIT_08s0007g08330.t01 Wine grape extracellular 53.81 52.48
VIT_08s0007g07770.t01 Wine grape extracellular 53.12 52.04
VIT_08s0007g07780.t01 Wine grape extracellular 51.96 51.84
CDY06100 Canola extracellular 51.04 51.76
CDY61868 Canola extracellular 64.2 50.64
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus 45.27 49.37
KRH33163 Soybean extracellular, plastid 53.81 48.85
Solyc10g080210.1.1 Tomato extracellular 50.35 47.7
KRH66955 Soybean extracellular 51.04 47.63
CDY35976 Canola extracellular 46.19 47.51
CDY28005 Canola extracellular 45.96 47.27
CDY07963 Canola extracellular 47.58 47.03
CDX74019 Canola extracellular 47.34 46.91
HORVU0Hr1G038940.1 Barley cytosol 43.42 46.53
PGSC0003DMT400070039 Potato cytosol 43.88 46.34
TraesCS4A01G066700.1 Wheat extracellular 45.03 45.03
TraesCS4B01G244300.1 Wheat extracellular 44.8 44.8
TraesCS4D01G243600.1 Wheat extracellular 44.8 44.8
KXG39856 Sorghum extracellular 44.11 44.42
GSMUA_Achr1P22940_001 Banana extracellular 44.8 43.99
Os03t0216800-01 Rice extracellular 44.34 43.84
KRG95273 Soybean extracellular 51.96 43.02
CDY04708 Canola plastid 27.02 42.24
CDY54312 Canola extracellular 42.96 41.89
CDY57689 Canola extracellular 43.19 41.83
Zm00001d048079_P001 Maize extracellular 42.96 40.26
CDX85471 Canola extracellular 36.95 39.41
CDY11585 Canola extracellular 41.57 38.54
CDY47139 Canola extracellular 41.34 38.33
CDY50769 Canola extracellular 30.25 38.3
CDY25786 Canola cytosol 39.26 38.12
CDY54292 Canola cytosol 39.26 38.12
CDY02729 Canola extracellular 37.64 38.08
CDY41695 Canola extracellular 38.11 37.93
CDY39404 Canola extracellular 34.87 37.84
CDY16952 Canola extracellular 37.88 37.79
CDY39399 Canola extracellular 34.64 37.5
CDX73440 Canola extracellular 34.41 37.25
CDY69377 Canola extracellular 34.41 37.25
CDX95284 Canola extracellular 34.64 37.13
CDY56952 Canola extracellular 35.8 36.82
CDY47032 Canola extracellular 34.18 36.72
CDX74418 Canola extracellular 35.57 36.49
CDX72553 Canola extracellular 33.95 36.48
CDX69397 Canola extracellular 33.95 36.39
CDY67535 Canola extracellular 26.1 36.33
CDX69569 Canola extracellular 36.49 35.99
CDY09873 Canola extracellular 36.26 35.76
CDY44150 Canola extracellular, golgi, plastid 41.34 35.66
CDY30105 Canola extracellular 36.95 35.63
CDX97703 Canola extracellular 36.95 35.4
CDY37571 Canola cytosol 30.48 35.29
CDY38648 Canola cytosol 30.25 35.03
CDY30107 Canola extracellular 36.49 34.65
CDX75843 Canola extracellular 36.03 34.44
CDY58462 Canola extracellular 36.03 34.44
CDX97704 Canola extracellular 36.26 34.43
CDY43307 Canola extracellular 36.49 33.4
CDX93644 Canola extracellular 36.26 33.26
CDY13645 Canola extracellular 35.8 32.98
CDX83631 Canola extracellular 35.8 32.91
CDX68839 Canola cytosol 30.72 32.76
CDY15246 Canola extracellular 36.95 32.59
CDX75239 Canola cytosol 30.48 32.51
CDX89966 Canola extracellular 36.49 32.18
CDY41445 Canola endoplasmic reticulum 41.11 32.01
CDX77909 Canola extracellular 36.26 31.98
CDY39884 Canola extracellular 31.87 31.01
CDY71357 Canola extracellular, vacuole 21.71 29.65
CDY54228 Canola extracellular, golgi, vacuole 33.95 27.84
CDY37962 Canola extracellular, golgi, vacuole 34.18 27.82
CDY20962 Canola extracellular, golgi, vacuole 33.95 27.68
CDY20612 Canola extracellular 33.72 27.5
CDX93397 Canola extracellular, golgi, vacuole 33.72 27.39
CDY47212 Canola extracellular 33.49 27.05
CDY50367 Canola extracellular, golgi 33.49 27.05
CDY34877 Canola extracellular, golgi 30.25 26.79
Protein Annotations
Gene3D:2.160.20.10MapMan:21.3.5.1.1GO:A0A078FNR3UniProt:A0A078FNR3EnsemblPlants:CDY14791ProteinID:CDY14791
ProteinID:CDY14791.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00084658001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF3InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EDF13D::
Description
BnaC04g47880DBnaC04g47880D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FNR3]
Coordinates
chrLK032047:-:394888..397066
Molecular Weight (calculated)
46671.1 Da
IEP (calculated)
8.764
GRAVY (calculated)
-0.348
Length
433 amino acids
Sequence
(BLAST)
001: MAHCWTVLTG LLVWSLLMLS WCEASRNNIN RYDHSYGTFK SNSLIKRRDD ITRLKSVARA SLRLPTTVSV SDFGAKGDGK TDDTQAFVNA WKKACSSSGP
101: VNLLVPEGKT YFLKSLRLNG PCKSVLTVQI LGTLSASQQR SDYKDLSKWI TFDGVNSLTV DGGATGTVNG NGETWWENSC KRNEAKKCTK APTALTFYNS
201: KNLRVNNLRV KDAQQIQISI EKCSNVQVSN VEVTAPADSP NTDGIHITNT QNIQVSKSII GTGDDCISIE SGSQNVKIND LTCGPGHGIS IGSLGDDNSK
301: AFVSGVTVDG AKLSGTDNGV RIKTYQGGSG TASNIIFQNI QMENVKNPII IDQDYCDKSK CTEQKSAVQI KNVVYRNISG TSASDIAITF NCSKNYPCQG
401: IVLDKVNIKG GKASCSNANV MDKDGVLPQC KST
Best Arabidopsis Sequence Match ( AT2G41850.1 )
(BLAST)
001: MARCTNLVTV FLLWALLMFS WCKASRISPN VYDHSYKRFK SDSLIKRRED ITGLRSFVRA SLRTPTTVSV SDFGAKGDGK TDDTQAFVNA WKKACSSNGA
101: VNLLVPKGNT YLLKSIQLTG PCNSILTVQI FGTLSASQKR SDYKDISKWI MFDGVNNLSV DGGDTGVVDG NGETWWQNSC KRNKAKPCTK APTALTFYNS
201: KSLIVKNLKV RNAQQIQISI EKCSNVQVSN VVVTAPADSP NTDGIHITNT QNIRVSESII GTGDDCISIE SGSQNVQIND ITCGPGHGIS IGSLGDDNSK
301: AFVSGVTVDG AKLSGTDNGV RIKTYQGGSG TASNIIFQNI QMDNVKNPII IDQDYCDKSK CTTEKSAVQV KNVVYRDISG TSASENAITF NCSKNYPCQG
401: IVLDRVNIKG GKATCTNANV VDKGAVLPQC NST
Arabidopsis Description
ADPG2Polygalacturonase ADPG2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY29]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.