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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular, plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003286.1-P Field mustard extracellular 100.0 100.0
AT3G57510.1 Thale cress extracellular 87.07 87.47
CDX72025 Canola extracellular 86.14 86.34
CDY61868 Canola extracellular 92.61 73.04
CDX79907 Canola extracellular 67.9 67.59
CDY14791 Canola extracellular 67.21 67.21
CDY06100 Canola extracellular 66.05 66.98
CDY06902 Canola extracellular 66.97 66.97
CDY48768 Canola extracellular 67.21 66.9
Solyc04g015530.1.1 Tomato cytosol 49.19 54.34
KRH71979 Soybean extracellular 53.12 53.74
VIT_08s0007g08330.t01 Wine grape extracellular 54.27 52.93
VIT_08s0007g07750.t01 Wine grape extracellular 53.58 52.49
VIT_08s0007g07760.t01 Wine grape extracellular 52.42 52.18
VIT_08s0007g07780.t01 Wine grape extracellular 52.19 52.07
VIT_08s0007g07770.t01 Wine grape extracellular 52.89 51.81
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus 46.65 50.88
CDY35976 Canola extracellular 46.42 47.74
CDY07963 Canola extracellular 48.27 47.72
CDY28005 Canola extracellular 46.19 47.51
KRH33163 Soybean extracellular, plastid 52.19 47.38
KRH66955 Soybean extracellular 50.58 47.2
CDX74019 Canola extracellular 47.58 47.14
PGSC0003DMT400070039 Potato cytosol 44.34 46.83
Solyc10g080210.1.1 Tomato extracellular 48.96 46.39
HORVU0Hr1G038940.1 Barley cytosol 40.42 43.32
KXG39856 Sorghum extracellular 42.26 42.56
KRG95273 Soybean extracellular 51.04 42.26
TraesCS4B01G244300.1 Wheat extracellular 41.8 41.8
TraesCS4D01G243600.1 Wheat extracellular 41.57 41.57
TraesCS4A01G066700.1 Wheat extracellular 41.34 41.34
Os03t0216800-01 Rice extracellular 41.57 41.1
CDY04708 Canola plastid 25.87 40.43
GSMUA_Achr1P22940_001 Banana extracellular 41.11 40.36
Zm00001d048079_P001 Maize extracellular 42.26 39.61
CDX85471 Canola extracellular 36.72 39.16
CDY41695 Canola extracellular 38.8 38.62
CDY37571 Canola cytosol 33.03 38.24
CDY11585 Canola extracellular 40.88 37.9
CDY54312 Canola extracellular 38.8 37.84
CDY57689 Canola extracellular 39.03 37.81
CDY47139 Canola extracellular 40.42 37.47
CDY38648 Canola cytosol 32.33 37.43
CDY02729 Canola extracellular 36.95 37.38
CDX95284 Canola extracellular 34.87 37.38
CDY16952 Canola extracellular 37.41 37.33
CDY67535 Canola extracellular 26.79 37.3
CDY56952 Canola extracellular 36.26 37.29
CDY25786 Canola cytosol 38.34 37.22
CDY54292 Canola cytosol 38.34 37.22
CDX69397 Canola extracellular 34.64 37.13
CDX74418 Canola extracellular 36.03 36.97
CDX69569 Canola extracellular 37.18 36.67
CDY39404 Canola extracellular 33.72 36.59
CDX73440 Canola extracellular 33.72 36.5
CDY39399 Canola extracellular 33.49 36.25
CDY09873 Canola extracellular 36.72 36.22
CDY69377 Canola extracellular 33.26 36.0
CDX72553 Canola extracellular 33.49 35.98
CDY50769 Canola extracellular 28.41 35.96
CDX97703 Canola extracellular 37.18 35.62
CDY47032 Canola extracellular 33.03 35.48
CDY30105 Canola extracellular 36.72 35.41
CDY44150 Canola extracellular, golgi, plastid 40.18 34.66
CDY15246 Canola extracellular 38.57 34.01
CDX75843 Canola extracellular 35.57 34.0
CDY30107 Canola extracellular 35.8 33.99
CDX89966 Canola extracellular 38.34 33.81
CDX97704 Canola extracellular 35.57 33.77
CDY43307 Canola extracellular 36.72 33.62
CDY58462 Canola extracellular 35.1 33.55
CDX77909 Canola extracellular 37.88 33.4
CDX93644 Canola extracellular 36.26 33.26
CDY13645 Canola extracellular 35.57 32.77
CDX83631 Canola extracellular 35.57 32.7
CDY71357 Canola extracellular, vacuole 23.09 31.55
CDX75239 Canola cytosol 29.56 31.53
CDX68839 Canola cytosol 29.56 31.53
CDY39884 Canola extracellular 32.33 31.46
CDY41445 Canola endoplasmic reticulum 39.49 30.76
CDY20962 Canola extracellular, golgi, vacuole 35.57 29.0
CDY54228 Canola extracellular, golgi, vacuole 35.33 28.98
CDY20612 Canola extracellular 35.33 28.81
CDX93397 Canola extracellular, golgi, vacuole 35.33 28.71
CDY50367 Canola extracellular, golgi 35.33 28.54
CDY47212 Canola extracellular 35.33 28.54
CDY37962 Canola extracellular, golgi, vacuole 34.87 28.38
CDY34877 Canola extracellular, golgi 31.87 28.22
Protein Annotations
Gene3D:2.160.20.10MapMan:21.3.5.1.1GO:A0A078BXJ6EnsemblPlants:CDX67693ProteinID:CDX67693ProteinID:CDX67693.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0016798
GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00098871001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502
PFscan:PS51257PANTHER:PTHR31375PANTHER:PTHR31375:SF3InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
UniProt:Q42636SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI000002E0EA
SEG:seg:::::
Description
BnaA07g17330DBnaA07g17330D protein [Source:UniProtKB/TrEMBL;Acc:Q42636]
Coordinates
chrLK031787:-:1790789..1793416
Molecular Weight (calculated)
46673.1 Da
IEP (calculated)
8.087
GRAVY (calculated)
-0.397
Length
433 amino acids
Sequence
(BLAST)
001: MARCHGSLAI FLCVLLMLAC CQALSSNVDD GYGHEDGSFE TDSLIKLNND DDVLTLKSSD RPTTESSTVS VSNFGAKGDG KTDDTQAFKK AWKKACSTNG
101: VTTFLIPKGK TYLLKSIRFR GPCKSLRSFQ ILGTLSASTK RSDYSNDKNH WLILEDVNNL SIDGGSAGIV DGNGKIWWQN SCKIDKSKPC TKAPTALTLY
201: NLNNLNVKNL RVRNAQQIQI SIEKCNSVDV KNVKITAPGD SPNTDGIHIV ATKNIRISNS DIGTGDDCIS IEDGSQNVQI NDLTCGPGHG ISIGSLGDDN
301: SKAYVSGINV DGATLSETDN GVRIKTYQGG SGTAKNIKFQ NIRMDNVKNP IIIDQNYCDK DKCEQQESAV QVNNVVYRNI QGTSATDVAI MFNCSVKYPC
401: QGIVLENVNI KGGKASCKNV NVKDKGTVSP KCP
Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)
001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S
Arabidopsis Description
ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.