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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001279.1-P Field mustard extracellular 98.17 98.17
CDY07963 Canola extracellular 96.11 95.89
CDY35976 Canola extracellular 79.18 82.19
CDY28005 Canola extracellular 78.95 81.95
AT3G07970.1 Thale cress extracellular 80.09 79.73
VIT_13s0064g00760.t01 Wine grape cytosol 44.39 58.43
KRH32949 Soybean extracellular 53.32 53.2
KRH23942 Soybean extracellular 53.55 53.18
KRH13966 Soybean extracellular 53.32 53.08
KRH39858 Soybean extracellular 52.63 52.15
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus 46.22 50.88
VIT_13s0064g00750.t01 Wine grape cytosol 51.72 49.56
HORVU0Hr1G038940.1 Barley cytosol 44.16 47.77
CDX72025 Canola extracellular 47.14 47.69
GSMUA_Achr1P22940_001 Banana extracellular 48.05 47.62
CDX67693 Canola extracellular 47.14 47.58
CDY14791 Canola extracellular 46.91 47.34
Solyc01g087280.1.1 Tomato extracellular 46.0 47.29
PGSC0003DMT400017691 Potato extracellular 37.99 47.29
CDY06902 Canola extracellular 46.68 47.11
CDX79907 Canola extracellular 46.0 46.21
CDY48768 Canola extracellular 45.77 45.98
TraesCS4A01G066700.1 Wheat extracellular 45.54 45.96
TraesCS4D01G243600.1 Wheat extracellular 45.08 45.5
KXG39856 Sorghum extracellular 44.39 45.12
TraesCS4B01G244300.1 Wheat extracellular 44.62 45.03
Os03t0216800-01 Rice extracellular 43.48 43.38
Zm00001d048079_P001 Maize extracellular 43.94 41.56
CDY04708 Canola plastid 25.4 40.07
CDX85471 Canola extracellular 35.93 38.67
CDY54292 Canola cytosol 38.67 37.89
CDY25786 Canola cytosol 38.44 37.67
CDY50769 Canola extracellular 29.29 37.43
CDY54312 Canola extracellular 37.99 37.39
CDY57689 Canola extracellular 38.22 37.36
CDY39404 Canola extracellular 33.87 37.09
CDY11585 Canola extracellular 39.59 37.05
CDY47139 Canola extracellular 39.59 37.05
CDY02729 Canola extracellular 36.16 36.92
CDX73440 Canola extracellular 33.64 36.75
CDY69377 Canola extracellular 33.64 36.75
CDY37571 Canola cytosol 30.89 36.1
CDX74418 Canola extracellular 34.78 36.02
CDY39399 Canola extracellular 32.95 36.0
CDY16952 Canola extracellular 35.7 35.94
CDY56952 Canola extracellular 34.55 35.87
CDY09873 Canola extracellular 35.93 35.76
CDX69569 Canola extracellular 35.7 35.54
CDY61868 Canola extracellular 44.62 35.52
CDX95284 Canola extracellular 32.72 35.4
CDY67535 Canola extracellular 25.17 35.37
CDY38648 Canola cytosol 30.21 35.29
CDY41695 Canola extracellular 35.01 35.17
CDX69397 Canola extracellular 32.27 34.9
CDX75843 Canola extracellular 35.93 34.66
CDX72553 Canola extracellular 31.81 34.49
CDX75239 Canola cytosol 32.04 34.48
CDY58462 Canola extracellular 35.7 34.44
CDX68839 Canola cytosol 31.81 34.24
CDY30107 Canola extracellular 35.7 34.21
CDX97704 Canola extracellular 35.7 34.21
CDY47032 Canola extracellular 31.35 33.99
CDY44150 Canola extracellular, golgi, plastid 38.9 33.86
CDY30105 Canola extracellular 34.78 33.85
CDX97703 Canola extracellular 35.01 33.85
CDY06100 Canola extracellular 32.72 33.49
CDY43307 Canola extracellular 35.01 32.35
CDX93644 Canola extracellular 34.78 32.2
CDX89966 Canola extracellular 35.01 31.16
CDY39884 Canola extracellular 31.58 31.01
CDY41445 Canola endoplasmic reticulum 39.36 30.94
CDY15246 Canola extracellular 34.55 30.75
CDX77909 Canola extracellular 34.32 30.55
CDX83631 Canola extracellular 32.72 30.36
CDY13645 Canola extracellular 32.49 30.21
CDY71357 Canola extracellular, vacuole 20.59 28.39
CDY54228 Canola extracellular, golgi, vacuole 34.1 28.22
CDY20962 Canola extracellular, golgi, vacuole 33.87 27.87
CDY20612 Canola extracellular 33.64 27.68
CDY37962 Canola extracellular, golgi, vacuole 33.64 27.63
CDY50367 Canola extracellular, golgi 33.87 27.61
CDY47212 Canola extracellular 33.87 27.61
CDX93397 Canola extracellular, golgi, vacuole 33.41 27.39
CDY34877 Canola extracellular, golgi 29.98 26.79
Protein Annotations
Gene3D:2.160.20.10MapMan:21.3.5.1.1GO:A0A078CCX0EnsemblPlants:CDX74019ProteinID:CDX74019ProteinID:CDX74019.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00111756001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF28InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EEC73B
SEG:seg:::::
Description
BnaA03g30280D
Coordinates
chrLK031800:-:956427..958897
Molecular Weight (calculated)
48181.8 Da
IEP (calculated)
9.283
GRAVY (calculated)
-0.291
Length
437 amino acids
Sequence
(BLAST)
001: MYQKTIIFLT ILLTSLRSCS SSYPFDPRFE HSISPNVYYE TNHQHGHITH NRHMKDPHAA PRSSPRAFNV NSFGAKANGN DDSQAFMKAW EAACSSKGTV
101: YIVVPENRAY TLKPVKFSGP CISSMIVFKI YGKIEAWKNP SDYRERRFWI VFQTVDNLRV EGGGRIDGNG KIWWPKSCKI NPELPCQEAP TAVTFVECNN
201: LMVRNIRLEN AQQMHMRVQK CENVKALNLM VTSPGHSPNT DGIHVTGTRN ILIQDSIIRT GDDCISIVSG SENVRATGIT CGPGHGISIG SLGAHNSEAY
301: VSNVVVSKAT LIGTTNGVRI KTWQGGHGMA KNIIFKDILM KNVTNPIIIN QNYCDQTKAC PEQKSAVQVS NVLYKNIHGT SSSPEAIKFV CSKSIPCQGI
401: SLQNVELVDQ ITKQDVSKAT CSNVKLKSSG RLSSLCT
Best Arabidopsis Sequence Match ( AT3G07970.1 )
(BLAST)
001: MYEKIIILSV FLLTFLPSCF SSYPFNHRDD LFMSSNVYYE TNRQHQHGHN TRNSHLKNRH GYAPRSSPRS FNVNTFGAKA NGNDDSKAFM KAWEAACSST
101: GIVYIVAPKN RDYMLKAVTF SGPCKSSLII FKIYGRIEAW ENPSDYKERR HWIVFENVNN LRVEGGGRID GNGHIWWPKS CKINPQLPCL GAPTAVTFVE
201: CNNLRVSNIR LENAQQMHLT FQDCKNVKAL NLMVTSPADS PNTDGIHVSG TQNILIQDSI VRTGDDCISI VSGSENVRAT GITCGPGHGI SIGSLGEDNS
301: EAYVSNVVVN KATLIGTTNG VRIKTWQGGH GMAKNIIFQD IIMKNVTNPI IINQDYCDRV EACPEQKSAV QVSNVLYKNI QGTSSRPIAV KFVCSKNIPC
401: RGISMQNVKL VDQTQQDVSK ASCSNVKLDT RGNVSPLCT
Arabidopsis Description
QRT2Polygalacturonase QRT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.