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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007332.1-P Field mustard extracellular 96.76 96.76
AT3G57510.1 Thale cress extracellular 86.34 86.54
CDX67693 Canola extracellular 86.34 86.14
CDY06100 Canola extracellular 76.62 77.52
CDY14791 Canola extracellular 70.37 70.21
CDY06902 Canola extracellular 70.14 69.98
CDX79907 Canola extracellular 70.14 69.66
CDY48768 Canola extracellular 69.91 69.43
CDY61868 Canola extracellular 82.41 64.85
Solyc04g015530.1.1 Tomato cytosol 49.31 54.34
VIT_08s0007g07750.t01 Wine grape extracellular 53.94 52.71
VIT_08s0007g08330.t01 Wine grape extracellular 54.17 52.7
KRH71979 Soybean extracellular 52.08 52.57
VIT_08s0007g07780.t01 Wine grape extracellular 52.78 52.53
VIT_08s0007g07770.t01 Wine grape extracellular 53.47 52.26
VIT_08s0007g07760.t01 Wine grape extracellular 52.55 52.18
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus 46.06 50.13
KRH66955 Soybean extracellular 52.31 48.71
Solyc10g080210.1.1 Tomato extracellular 50.93 48.14
CDY35976 Canola extracellular 46.76 47.98
CDY28005 Canola extracellular 46.53 47.74
CDY07963 Canola extracellular 48.38 47.72
KRH33163 Soybean extracellular, plastid 52.31 47.38
CDX74019 Canola extracellular 47.69 47.14
PGSC0003DMT400070039 Potato cytosol 44.44 46.83
HORVU0Hr1G038940.1 Barley cytosol 40.97 43.81
KXG39856 Sorghum extracellular 43.52 43.72
KRG95273 Soybean extracellular 52.08 43.02
TraesCS4B01G244300.1 Wheat extracellular 42.36 42.26
GSMUA_Achr1P22940_001 Banana extracellular 43.06 42.18
TraesCS4D01G243600.1 Wheat extracellular 42.13 42.03
Os03t0216800-01 Rice extracellular 42.59 42.01
TraesCS4A01G066700.1 Wheat extracellular 41.67 41.57
CDY04708 Canola plastid 25.69 40.07
Zm00001d048079_P001 Maize extracellular 42.82 40.04
CDY54312 Canola extracellular 40.51 39.41
CDX85471 Canola extracellular 36.81 39.16
CDY57689 Canola extracellular 40.28 38.93
CDY37571 Canola cytosol 33.33 38.5
CDY16952 Canola extracellular 38.66 38.48
CDY02729 Canola extracellular 37.73 38.08
CDY11585 Canola extracellular 40.97 37.9
CDY41695 Canola extracellular 37.96 37.7
CDY38648 Canola cytosol 32.64 37.7
CDY47139 Canola extracellular 40.74 37.69
CDX69397 Canola extracellular 35.19 37.62
CDY25786 Canola cytosol 38.66 37.44
CDY54292 Canola cytosol 38.66 37.44
CDY50769 Canola extracellular 29.4 37.13
CDY67535 Canola extracellular 26.62 36.98
CDX95284 Canola extracellular 34.26 36.63
CDY56952 Canola extracellular 35.65 36.58
CDX73440 Canola extracellular 33.8 36.5
CDY39399 Canola extracellular 33.8 36.5
CDX69569 Canola extracellular 37.04 36.45
CDY39404 Canola extracellular 33.56 36.34
CDX74418 Canola extracellular 35.42 36.26
CDY69377 Canola extracellular 33.33 36.0
CDY09873 Canola extracellular 36.57 35.99
CDX72553 Canola extracellular 33.33 35.73
CDY47032 Canola extracellular 32.41 34.74
CDY30105 Canola extracellular 35.88 34.52
CDY44150 Canola extracellular, golgi, plastid 40.05 34.46
CDX97703 Canola extracellular 35.88 34.29
CDY43307 Canola extracellular 37.5 34.25
CDX93644 Canola extracellular 37.04 33.9
CDY15246 Canola extracellular 38.19 33.6
CDX89966 Canola extracellular 37.96 33.4
CDY30107 Canola extracellular 35.19 33.33
CDX97704 Canola extracellular 34.95 33.11
CDX75843 Canola extracellular 34.72 33.11
CDX77909 Canola extracellular 37.5 32.99
CDY13645 Canola extracellular 35.88 32.98
CDX83631 Canola extracellular 35.88 32.91
CDX75239 Canola cytosol 30.79 32.76
CDX68839 Canola cytosol 30.79 32.76
CDY58462 Canola extracellular 34.26 32.67
CDY71357 Canola extracellular, vacuole 23.38 31.86
CDY39884 Canola extracellular 31.94 31.01
CDY41445 Canola endoplasmic reticulum 39.35 30.58
CDY54228 Canola extracellular, golgi, vacuole 34.95 28.6
CDY20962 Canola extracellular, golgi, vacuole 34.72 28.25
CDY37962 Canola extracellular, golgi, vacuole 34.72 28.2
CDX93397 Canola extracellular, golgi, vacuole 34.72 28.14
CDY20612 Canola extracellular 34.49 28.06
CDY34877 Canola extracellular, golgi 31.71 28.02
CDY50367 Canola extracellular, golgi 34.72 27.99
CDY47212 Canola extracellular 34.72 27.99
Protein Annotations
Gene3D:2.160.20.10MapMan:21.3.5.1.1GO:A0A078C5B2EnsemblPlants:CDX72025ProteinID:CDX72025ProteinID:CDX72025.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00155807001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF3InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EE470E
SEG:seg:::::
Description
BnaC08g28490D
Coordinates
chrLK031795:+:1917386..1921287
Molecular Weight (calculated)
46952.1 Da
IEP (calculated)
7.996
GRAVY (calculated)
-0.520
Length
432 amino acids
Sequence
(BLAST)
001: MARCCVPLAI FLGVLLMLSW CETLSSNVDD GYGHEDGRYE SDSLIKLNND DVLTLKSFDK PTPESSTVSV SDFGAKGDGK TDDTQAFKKA WKKACSTKGV
101: TSFLVPKGKT YLLKSTQFRG PCKSLRRFQI LGTLSASTKR SDYNKDKNHW LILEDVNNLS VDGGSEGTVD GNGKIWWKNS CKIDRSKPCT KAPTALTFYN
201: LKNLNVKNLR VRNAQQIQIS VEKCNNVNIK NVEITAPDDS PNTDGIHITN TQNIRVSNSH IGTGDDCISI EDGSQNVQIN DLTCGPGHGI SIGSLGDDNS
301: KAYVSGVNVD GAKLAETDNG VRIKTYQGGS GTAKNIKFQN IRMENVKNPI IIDQNYCDKD KCEQQDSAVQ VNNVVYRNIS GTSATDVAIT FDCSEKYPCK
401: GIVLDNVNIK GGTASCKNAN VKNQGNVSPQ CS
Best Arabidopsis Sequence Match ( AT3G57510.1 )
(BLAST)
001: MARCCRHLAV FLCVLLMLSL CKALSSNVDD GYGHEDGSFE SDSLLKLNND DVLSLISSDE TTLEASTVSV SNFGAKGDGK TDDTQAFKKA WKKACSTNGV
101: TTFLVPKGKT YLLKSTRFRG PCKSLRNFQI LGTLSASTKR SDYKDKNHWL ILEDVNNLSI DGGSTGIING NGKTWWQNSC KIDKSKPCTK APTALTLYNL
201: KNLNVKNLRV KNAQQIQISI EKCNKVEVSN VEITAPGDSP NTDGIHITNT QNIRVSNSDI GTGDDCISIE DGTQNLQIFD LTCGPGHGIS IGSLGDDNSK
301: AYVSGINVDG AKFSESDNGV RIKTYQGGSG TAKNIKFQNI RMENVKNPII IDQDYCDKDK CEDQESAVQV KNVVYKNISG TSATDVAITL NCSEKYPCQG
401: IVLENVKIKG GTASCKNANV KNQGTVSPKC S
Arabidopsis Description
ADPG1Polygalacturonase ADPG1 [Source:UniProtKB/Swiss-Prot;Acc:O23147]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.