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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027210.1-P Field mustard extracellular 98.46 98.46
CDX97704 Canola extracellular 98.46 98.46
CDY30105 Canola extracellular 88.6 89.98
CDX97703 Canola extracellular 88.82 89.6
CDX75843 Canola extracellular 85.09 85.65
CDY58462 Canola extracellular 84.87 85.43
AT3G15720.1 Thale cress extracellular 79.17 79.17
CDY50769 Canola extracellular 34.21 45.61
CDY69377 Canola extracellular 39.47 45.0
CDY39404 Canola extracellular 39.25 44.86
CDX72553 Canola extracellular 39.25 44.42
VIT_09s0002g06650.t01 Wine grape extracellular 39.04 44.06
CDY39399 Canola extracellular 38.6 44.0
VIT_09s0002g06610.t01 Wine grape extracellular 37.28 43.7
CDX73440 Canola extracellular 38.16 43.5
CDY47032 Canola extracellular 38.38 43.42
VIT_09s0002g06580.t01 Wine grape cytosol 37.06 43.22
PGSC0003DMT400056828 Potato extracellular 37.06 42.46
CDX85471 Canola extracellular 36.84 41.38
PGSC0003DMT400008955 Potato extracellular 31.58 41.38
KRH23567 Soybean extracellular 36.18 41.15
CDY16952 Canola extracellular 39.04 41.01
CDY37571 Canola cytosol 33.11 40.37
CDY38648 Canola cytosol 32.89 40.11
CDY02729 Canola extracellular 37.06 39.49
KRH09740 Soybean extracellular 36.62 39.29
Solyc03g116580.2.1 Tomato extracellular 37.28 38.9
KXG26899 Sorghum extracellular 35.53 38.57
CDX69397 Canola extracellular 33.99 38.37
HORVU2Hr1G096130.1 Barley extracellular 33.99 38.27
TraesCS2B01G423300.1 Wheat extracellular 33.33 37.91
GSMUA_Achr11P... Banana extracellular 34.21 37.5
TraesCS2B01G423400.1 Wheat plastid 28.73 37.32
CDX74418 Canola extracellular 34.43 37.2
CDY56952 Canola extracellular 34.21 37.05
TraesCS2D01G402100.1 Wheat extracellular 32.89 37.04
CDY48768 Canola extracellular 35.31 37.01
GSMUA_Achr4P13200_001 Banana extracellular 34.21 36.97
TraesCS2A01G405300.1 Wheat extracellular, nucleus 32.68 36.79
CDX79907 Canola extracellular 35.09 36.78
TraesCS2D01G402200.1 Wheat extracellular 31.36 36.57
CDY14791 Canola extracellular 34.65 36.49
CDX68839 Canola cytosol 32.46 36.45
TraesCS2A01G405100.1 Wheat extracellular 33.33 36.45
CDY35976 Canola extracellular 33.55 36.34
CDY06902 Canola extracellular 34.43 36.26
CDX75239 Canola cytosol 32.24 36.21
CDY28005 Canola extracellular 33.33 36.1
CDY04708 Canola plastid 21.93 36.1
GSMUA_Achr9P22320_001 Banana extracellular 32.68 36.08
TraesCS2A01G405600.1 Wheat extracellular 25.22 36.05
CDX67693 Canola extracellular 33.99 35.8
CDX74019 Canola extracellular 34.21 35.7
TraesCS2B01G423200.1 Wheat extracellular 33.11 35.53
CDY07963 Canola extracellular 33.99 35.39
TraesCS2D01G402000.1 Wheat extracellular 33.11 35.28
CDX72025 Canola extracellular 33.33 35.19
CDY39884 Canola extracellular 34.21 35.06
TraesCS2D01G402300.1 Wheat extracellular 25.44 34.83
CDY41695 Canola extracellular 32.89 34.48
CDX95284 Canola extracellular 30.26 34.16
CDY54312 Canola extracellular 32.46 33.33
CDY09873 Canola extracellular 31.58 32.8
CDY67535 Canola extracellular 22.37 32.8
CDY57689 Canola extracellular 32.02 32.66
CDX69569 Canola extracellular 31.36 32.57
CDY54292 Canola cytosol 30.7 31.39
CDY11585 Canola extracellular 32.02 31.26
CDY25786 Canola cytosol 30.48 31.17
CDY47139 Canola extracellular 31.8 31.05
CDX83631 Canola extracellular 31.8 30.79
Zm00001d039668_P001 Maize plastid 29.39 30.66
CDY13645 Canola extracellular 31.36 30.43
CDY44150 Canola extracellular, golgi, plastid 33.33 30.28
CDX89966 Canola extracellular 32.24 29.94
CDX77909 Canola extracellular 32.02 29.74
CDY15246 Canola extracellular 31.8 29.53
CDX93644 Canola extracellular 30.26 29.24
CDY43307 Canola extracellular 30.26 29.18
CDY71357 Canola extracellular, vacuole 19.96 28.71
CDY61868 Canola extracellular 32.68 27.14
Os01t0172900-00 Rice nucleus 17.54 27.12
CDY41445 Canola endoplasmic reticulum 32.89 26.98
CDY54228 Canola extracellular, golgi, vacuole 30.48 26.33
CDY20962 Canola extracellular, golgi, vacuole 30.48 26.18
CDY20612 Canola extracellular 30.26 25.99
CDY34877 Canola extracellular, golgi 27.85 25.97
CDY37962 Canola extracellular, golgi, vacuole 29.61 25.38
CDX93397 Canola extracellular, golgi, vacuole 29.39 25.14
CDY06100 Canola extracellular 23.46 25.06
CDY47212 Canola extracellular 28.29 24.07
CDY50367 Canola extracellular, golgi 28.29 24.07
GSMUA_Achr4P06370_001 Banana extracellular 32.68 19.76
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078GY25UniProt:A0A078GY25EnsemblPlants:CDY30107ProteinID:CDY30107
ProteinID:CDY30107.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016043GO:GO:0016787GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00044669001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF42InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EF2B8ESEG:seg::::
Description
BnaC05g37550DBnaC05g37550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY25]
Coordinates
chrLK032249:-:101591..103683
Molecular Weight (calculated)
48784.9 Da
IEP (calculated)
5.088
GRAVY (calculated)
-0.053
Length
456 amino acids
Sequence
(BLAST)
001: MQKKTWILIF SVFILQTFTY SKALDVTQYG AVGDGVTDDS QAFLKAWEDV CSGAGDGQLI IPAGMAFMLQ PLKFEGSCKS TPIVVQILGN LVASSRGKWK
101: GDKDQWILFS DIEGLVVEGN GELNGQGSSW WEHKGSSRPT ALKFKSCNNL RLSGLTHVDS AMAHIHINGC NDVTISNLRI NAPESSPNTD GIDVAVSSNV
201: IIQDCVIATG DDCIAINSGT ANIRISGIDC GPGHGISIGS LGKDGEIASV EDVCVQNCNF RGTMNGARIK TWPGGSGYAR RITFNGITLD NVENPIIIDQ
301: HYNNGDSDKS TDDKSSAVEV SKVVYSNFVG TSRSEYGVSF RCSTRAPCTE IFLKDVKIET ASSGMGQVAQ GQCLNVRGGV STLAVPGLEC LALSTDMLSW
401: GTMPEQACML PQQSVQPNTR PLQDPLWVYG SRGQRLGVYS VVLTSLISFG FSYVLG
Best Arabidopsis Sequence Match ( AT3G15720.1 )
(BLAST)
001: MKKKTWFLNF SLFFLQIFTS SNALDVTQFG AVGDGVTDDS QAFLKAWEAV CSGTGDGQFV VPAGMTFMLQ PLKFQGSCKS TPVFVQMLGK LVAPSKGNWK
101: GDKDQWILFT DIEGLVIEGD GEINGQGSSW WEHKGSRPTA LKFRSCNNLR LSGLTHLDSP MAHIHISECN YVTISSLRIN APESSPNTDG IDVGASSNVV
201: IQDCIIATGD DCIAINSGTS NIHISGIDCG PGHGISIGSL GKDGETATVE NVCVQNCNFR GTMNGARIKT WQGGSGYARM ITFNGITLDN VENPIIIDQF
301: YNGGDSDNAK DRKSSAVEVS KVVFSNFIGT SKSEYGVDFR CSERVPCTEI FLRDMKIETA SSGSGQVAQG QCLNVRGAST IAVPGLECLE LSTDMFSSAQ
401: LLEQTCMSAQ SVQPRTTTQP MQDPIWVFQS RGKQLRVYNI AILVSFISLV TYILAR
Arabidopsis Description
Probable polygalacturonase At3g15720 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW07]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.