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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 2
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:plastid
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY39399 Canola extracellular 94.74 81.0
CDX73440 Canola extracellular 93.27 79.75
CDY39404 Canola extracellular 90.06 77.19
CDY69377 Canola extracellular 90.06 77.0
AT5G44830.1 Thale cress extracellular 71.64 73.8
AT5G44840.1 Thale cress extracellular 75.44 65.98
CDY47032 Canola extracellular 58.19 49.38
CDX72553 Canola extracellular 58.19 49.38
TraesCS2B01G423400.1 Wheat plastid 39.18 38.18
CDX85471 Canola extracellular 44.44 37.44
PGSC0003DMT400056828 Potato extracellular 43.27 37.19
PGSC0003DMT400008955 Potato extracellular 35.96 35.34
CDY02729 Canola extracellular 43.86 35.05
CDY16952 Canola extracellular 44.44 35.02
TraesCS2B01G423300.1 Wheat extracellular 40.94 34.91
CDY58462 Canola extracellular 46.2 34.88
TraesCS2D01G402100.1 Wheat extracellular 41.23 34.81
CDY39884 Canola extracellular 45.03 34.61
TraesCS2D01G402200.1 Wheat extracellular 39.47 34.53
CDY30105 Canola extracellular 45.32 34.52
CDX75239 Canola cytosol 40.94 34.48
CDX68839 Canola cytosol 40.94 34.48
CDX75843 Canola extracellular 45.61 34.44
CDX97703 Canola extracellular 45.32 34.29
CDX97704 Canola extracellular 45.61 34.21
CDY30107 Canola extracellular 45.61 34.21
TraesCS2A01G405300.1 Wheat extracellular, nucleus 40.35 34.07
HORVU2Hr1G096130.1 Barley extracellular 40.35 34.07
CDX69397 Canola extracellular 39.47 33.42
KXG26899 Sorghum extracellular 40.64 33.1
TraesCS2A01G405600.1 Wheat extracellular 30.7 32.92
TraesCS2A01G405100.1 Wheat extracellular 40.06 32.85
TraesCS2D01G402300.1 Wheat extracellular 31.58 32.43
TraesCS2B01G423200.1 Wheat extracellular 40.06 32.24
GSMUA_Achr9P22320_001 Banana extracellular 38.3 31.72
GSMUA_Achr11P... Banana extracellular 38.3 31.49
CDY04708 Canola plastid 25.44 31.41
CDY56952 Canola extracellular 38.6 31.35
TraesCS2D01G402000.1 Wheat extracellular 39.18 31.31
CDY37571 Canola cytosol 34.21 31.28
CDX74418 Canola extracellular 38.3 31.04
CDY38648 Canola cytosol 33.92 31.02
CDY54312 Canola extracellular 39.47 30.41
CDY14791 Canola extracellular 38.3 30.25
CDY57689 Canola extracellular 39.47 30.2
KRH05150 Soybean extracellular 23.68 30.11
GSMUA_Achr4P13200_001 Banana extracellular 37.13 30.09
CDY06902 Canola extracellular 38.01 30.02
CDY09873 Canola extracellular 38.3 29.84
CDX69569 Canola extracellular 38.01 29.61
CDY67535 Canola extracellular 26.9 29.58
CDX72025 Canola extracellular 37.13 29.4
CDX74019 Canola extracellular 37.43 29.29
CDY07963 Canola extracellular 37.43 29.22
CDX79907 Canola extracellular 36.84 28.97
CDY48768 Canola extracellular 36.84 28.97
CDY35976 Canola extracellular 35.38 28.74
CDY28005 Canola extracellular 35.38 28.74
CDX67693 Canola extracellular 35.96 28.41
Zm00001d039668_P001 Maize plastid 36.26 28.38
CDY54292 Canola cytosol 34.8 26.68
CDY25786 Canola cytosol 34.5 26.46
CDY41695 Canola extracellular 33.63 26.44
CDX95284 Canola extracellular 30.12 25.5
CDY47139 Canola extracellular 34.21 25.05
CDY11585 Canola extracellular 34.21 25.05
CDX77909 Canola extracellular 35.09 24.44
CDY13645 Canola extracellular 33.33 24.26
CDX83631 Canola extracellular 33.33 24.2
CDY44150 Canola extracellular, golgi, plastid 35.38 24.1
CDY20612 Canola extracellular 37.13 23.92
CDY37962 Canola extracellular, golgi, vacuole 37.13 23.87
CDX93397 Canola extracellular, golgi, vacuole 37.13 23.83
CDY20962 Canola extracellular, golgi, vacuole 36.84 23.73
CDY50367 Canola extracellular, golgi 36.55 23.32
CDY47212 Canola extracellular 36.55 23.32
CDY54228 Canola extracellular, golgi, vacuole 35.96 23.3
CDX89966 Canola extracellular 33.33 23.22
CDY15246 Canola extracellular 33.33 23.22
CDY71357 Canola extracellular, vacuole 21.34 23.03
CDY43307 Canola extracellular 31.58 22.83
CDX93644 Canola extracellular 31.29 22.67
CDY34877 Canola extracellular, golgi 31.58 22.09
CDY41445 Canola endoplasmic reticulum 35.38 21.76
Os01t0172900-00 Rice nucleus 18.13 21.02
CDY61868 Canola extracellular 33.63 20.95
CDY06100 Canola extracellular 24.27 19.44
GSMUA_Achr4P06370_001 Banana extracellular 37.72 17.11
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078IMX8UniProt:A0A078IMX8EnsemblPlants:CDY50769ProteinID:CDY50769
ProteinID:CDY50769.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00097464001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF42InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126UniParc:UPI0004EEFB34:::
Description
BnaC07g18180DBnaC07g18180D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMX8]
Coordinates
chrLK032938:+:15500..17241
Molecular Weight (calculated)
37020.7 Da
IEP (calculated)
4.709
GRAVY (calculated)
-0.219
Length
342 amino acids
Sequence
(BLAST)
001: MCSSGGSNKT LLVPSDNTFL LQPLVFQGPC NSPSVQVQLE GKIVAPLNKA VWSDFKSYEW VSFNKIIGLT VLGSGTINGR GSSFWEANMP ASKRPTQLHF
101: QGCNNLEING ITSFDSPRNH ISLTDCRQVK ITQIKLIAPG DSPNTDGIDI STSTDVEIYD TIVGTGDDCV ALNSGSINIS IARMRCGPGH GISVGSLGKD
201: GEESIVENVQ VTNCTFNDTN NGARIKTWPN GKGYARNIVF MDIMLTETKN PIIIDQQYID KGRIDVEESS AVAISNVTFT DFHGTSRQDE IIKIDCSEVT
301: CCKDIVLDRI NITTVDGNKP IVECSNAYGN STNAYDGCLK TQ
Best Arabidopsis Sequence Match ( AT5G44840.1 )
(BLAST)
001: MEIILRGVFL LTLLHSILVN GQIYDVLEFG ADGNGITDDS KAFVKAWSAM CGSGGNSKTF IIPSNKTFLL QPLTFQGPCK SPSVQVKFDG KIVAPINKAA
101: WSDYKLFRWV SFKEIIGLTV NGSGTIHGRG SSFWKQGLPA SKRPTQLHFQ RCNDLMITGI TSFNSPKNHI SISECKRVKI TKIKLVAPHD SPNTDGINIS
201: ESSDVDIYDT VIGTGDDCVA INSGSMNINI ARMNCGPGHG ISVGSVGRDG EESIVENVQV TNCTFIRTDN GARIKTWPNG KGYAKNILFK SLTFRETKNP
301: IIIDQNYVDK GRLDVEESAV AISNVTFTDL RGTSKLDEII KIDCSKVTYC KDIVLDKIDI ATVDGNKPIV ECSNVYGKSI NANEANGCFK T
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:TAIR;Acc:AT5G44840]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.