Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- extracellular 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G44840.1 | Thale cress | extracellular | 90.36 | 76.73 |
| CDY50769 | Canola | extracellular | 73.8 | 71.64 |
| CDY39404 | Canola | extracellular | 75.9 | 63.16 |
| Bra025099.1-P | Field mustard | extracellular | 75.9 | 63.0 |
| CDY39399 | Canola | extracellular | 75.0 | 62.25 |
| Bra025103.1-P | Field mustard | extracellular | 74.7 | 62.0 |
| CDY69377 | Canola | extracellular | 74.7 | 62.0 |
| CDX73440 | Canola | extracellular | 71.99 | 59.75 |
| AT4G35670.1 | Thale cress | extracellular | 58.13 | 48.98 |
| AT5G27530.1 | Thale cress | cytosol | 54.52 | 39.52 |
| TraesCS2B01G423400.1 | Wheat | plastid | 38.86 | 36.75 |
| PGSC0003DMT400056828 | Potato | extracellular | 43.98 | 36.68 |
| PGSC0003DMT400008955 | Potato | extracellular | 37.35 | 35.63 |
| AT1G80140.1 | Thale cress | extracellular | 35.84 | 35.42 |
| AT4G32370.1 | Thale cress | extracellular | 36.14 | 35.09 |
| AT5G17200.1 | Thale cress | extracellular | 44.28 | 34.92 |
| TraesCS2D01G402200.1 | Wheat | extracellular | 39.76 | 33.76 |
| AT3G15720.1 | Thale cress | extracellular | 45.78 | 33.33 |
| TraesCS2D01G402100.1 | Wheat | extracellular | 40.66 | 33.33 |
| TraesCS2B01G423300.1 | Wheat | extracellular | 39.46 | 32.67 |
| TraesCS2A01G405300.1 | Wheat | extracellular, nucleus | 39.76 | 32.59 |
| HORVU2Hr1G096130.1 | Barley | extracellular | 39.16 | 32.1 |
| TraesCS2A01G405600.1 | Wheat | extracellular | 30.72 | 31.97 |
| AT5G39910.1 | Thale cress | extracellular | 35.84 | 31.9 |
| TraesCS2D01G402300.1 | Wheat | extracellular | 31.93 | 31.83 |
| GSMUA_Achr11P... | Banana | extracellular | 39.76 | 31.73 |
| GSMUA_Achr9P22320_001 | Banana | extracellular | 39.46 | 31.72 |
| KXG26899 | Sorghum | extracellular | 39.76 | 31.43 |
| GSMUA_Achr4P13200_001 | Banana | extracellular | 39.76 | 31.28 |
| TraesCS2A01G405100.1 | Wheat | extracellular | 39.16 | 31.18 |
| TraesCS2B01G423200.1 | Wheat | extracellular | 39.16 | 30.59 |
| TraesCS2D01G402000.1 | Wheat | extracellular | 38.55 | 29.91 |
| AT4G32380.1 | Thale cress | extracellular | 40.36 | 29.58 |
| AT3G07970.1 | Thale cress | extracellular | 38.25 | 28.93 |
| AT5G14650.1 | Thale cress | extracellular | 37.65 | 28.74 |
| KRH05150 | Soybean | extracellular | 23.19 | 28.62 |
| AT4G32375.1 | Thale cress | extracellular | 36.45 | 28.61 |
| Zm00001d039668_P001 | Maize | plastid | 37.65 | 28.6 |
| AT2G41850.1 | Thale cress | extracellular | 36.45 | 27.94 |
| AT3G57510.1 | Thale cress | extracellular | 35.84 | 27.61 |
| AT1G80170.1 | Thale cress | extracellular | 36.45 | 27.25 |
| AT1G56710.1 | Thale cress | extracellular | 35.24 | 26.96 |
| AT1G23460.1 | Thale cress | extracellular | 35.54 | 25.65 |
| AT1G70500.1 | Thale cress | extracellular | 34.94 | 24.79 |
| AT3G26610.1 | Thale cress | extracellular | 34.64 | 24.47 |
| AT1G02460.1 | Thale cress | extracellular | 34.64 | 23.42 |
| AT4G01890.1 | Thale cress | extracellular | 32.83 | 23.34 |
| AT1G48100.1 | Thale cress | extracellular | 31.02 | 21.68 |
| AT1G60590.1 | Thale cress | extracellular | 35.24 | 21.67 |
| AT1G10640.1 | Thale cress | extracellular, golgi | 34.34 | 21.43 |
| Os01t0172900-00 | Rice | nucleus | 18.67 | 21.02 |
| GSMUA_Achr4P06370_001 | Banana | extracellular | 38.55 | 16.98 |
Protein Annotations
| Gene3D:2.160.20.10 | MapMan:50.3.2 | EntrezGene:834513 | ProteinID:AED95166.1 | ArrayExpress:AT5G44830 | EnsemblPlantsGene:AT5G44830 |
| RefSeq:AT5G44830 | TAIR:AT5G44830 | RefSeq:AT5G44830-TAIR-G | EnsemblPlants:AT5G44830.1 | TAIR:AT5G44830.1 | Unigene:At.55365 |
| ProteinID:BAB08836.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 |
| GO:GO:0016798 | GO:GO:0016829 | GO:GO:0071555 | InterPro:Glyco_hydro_28 | InterPro:IPR012334 | RefSeq:NP_199296.1 |
| PFAM:PF00295 | ScanProsite:PS00502 | PANTHER:PTHR31375 | PANTHER:PTHR31375:SF42 | InterPro:PbH1 | InterPro:Pectin_lyas_fold |
| InterPro:Pectin_lyase_fold/virulence | UniProt:Q9FIY9 | SMART:SM00710 | SUPFAM:SSF51126 | UniParc:UPI0000048C07 | : |
Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FIY9]
Coordinates
chr5:-:18100080..18101885
Molecular Weight (calculated)
36365.0 Da
IEP (calculated)
6.858
GRAVY (calculated)
-0.276
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGSGGNSKT FLIPSNQTFL LQPLTFQGPC KSPSVQVKFD GKIVAPINKA AWSESKLFRW VSFKEIIGLT VNGSGTIHGR GSSFWKQLHF QRCNDLKIIG
101: ITSFNSPRNH ISISECKRVQ LTKIKLVAPE DSPNTDGINI SGSSDVDVYD TFIGTGDDCV AINNGSVNIN ITRMNCGPGH GISVGSLGRD GEESIVENVQ
201: VTNCTFFRTD NGVRIKTWPN GKGYARNILF KDLTFRESKN PIIIDQNYVD KGRLDVEESA VAISNVTFTD IRGTSQRNEI IKIDCSEVTY CKDIVLDKID
301: IATVDGNKPV VECSNVYGKS INTNDANGCF ED
101: ITSFNSPRNH ISISECKRVQ LTKIKLVAPE DSPNTDGINI SGSSDVDVYD TFIGTGDDCV AINNGSVNIN ITRMNCGPGH GISVGSLGRD GEESIVENVQ
201: VTNCTFFRTD NGVRIKTWPN GKGYARNILF KDLTFRESKN PIIIDQNYVD KGRLDVEESA VAISNVTFTD IRGTSQRNEI IKIDCSEVTY CKDIVLDKID
301: IATVDGNKPV VECSNVYGKS INTNDANGCF ED
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.