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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 2
  • extracellular 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:extracellular, mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:extracellular
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G402200.1 Wheat extracellular 94.87 85.17
TraesCS2B01G423300.1 Wheat extracellular 85.19 74.56
HORVU2Hr1G096130.1 Barley extracellular 85.19 73.83
TraesCS2B01G423200.1 Wheat extracellular 80.34 66.35
KXG26899 Sorghum extracellular 61.82 51.67
TraesCS1B01G083700.1 Wheat extracellular 33.9 39.4
CDY50769 Canola extracellular 38.18 39.18
AT5G44830.1 Thale cress extracellular 36.75 38.86
KRH14715 Soybean cytosol, extracellular, nucleus, plastid 37.89 38.33
KRG88958 Soybean extracellular 38.46 38.03
KRH48978 Soybean extracellular 32.19 37.92
KRH23786 Soybean cytosol, extracellular, nucleus, plastid 38.75 37.78
TraesCS5B01G469000.1 Wheat extracellular 42.73 36.95
GSMUA_Achr11P... Banana extracellular 43.59 36.78
TraesCS5B01G468700.1 Wheat extracellular 42.45 36.34
VIT_09s0002g06650.t01 Wine grape extracellular 41.31 35.89
VIT_09s0096g00850.t01 Wine grape cytoskeleton, cytosol, peroxisome 37.61 35.58
AT4G35670.1 Thale cress extracellular 39.89 35.53
VIT_09s0002g06610.t01 Wine grape extracellular 38.75 34.96
CDY69377 Canola extracellular 39.32 34.5
CDX73440 Canola extracellular 39.32 34.5
TraesCS7B01G067800.1 Wheat extracellular 40.74 34.05
AT5G44840.1 Thale cress extracellular 37.89 34.02
KRH66273 Soybean extracellular 29.91 33.87
CDY39404 Canola extracellular 38.46 33.83
KRH66276 Soybean extracellular 34.19 33.8
VIT_09s0002g06580.t01 Wine grape cytosol 37.61 33.76
Bra025099.1-P Field mustard extracellular 38.46 33.75
Bra025103.1-P Field mustard extracellular 38.46 33.75
CDY39399 Canola extracellular 38.46 33.75
TraesCS5B01G468900.1 Wheat extracellular 40.17 33.65
CDX72553 Canola extracellular 38.46 33.5
CDY47032 Canola extracellular 38.46 33.5
TraesCS3B01G148500.1 Wheat extracellular 38.18 33.42
Solyc08g060970.2.1 Tomato nucleus 37.61 33.25
KRH23567 Soybean extracellular 37.89 33.17
TraesCS1B01G142700.1 Wheat plastid 41.03 32.73
PGSC0003DMT400056828 Potato extracellular 37.04 32.66
TraesCS1B01G382200.2 Wheat extracellular 38.46 32.61
TraesCS3B01G148600.1 Wheat extracellular 38.18 32.52
PGSC0003DMT400008955 Potato extracellular 32.19 32.47
TraesCS4B01G244300.1 Wheat extracellular 39.89 32.33
Bra011341.1-P Field mustard cytosol 36.18 32.32
Solyc03g116580.2.1 Tomato extracellular 39.6 31.81
CDX85471 Canola extracellular 36.75 31.77
KRH09740 Soybean extracellular 38.18 31.53
CDX68839 Canola cytosol 36.47 31.53
CDX75239 Canola cytosol 36.18 31.28
KRH05150 Soybean extracellular 23.65 30.86
KRH66305 Soybean extracellular 33.62 30.65
Bra008572.1-P Field mustard extracellular 37.89 30.65
CDY02729 Canola extracellular 37.32 30.61
CDY16952 Canola extracellular 37.61 30.41
Bra023600.1-P Field mustard extracellular 37.04 30.37
AT5G17200.1 Thale cress extracellular 36.18 30.17
TraesCS1B01G382700.1 Wheat extracellular 35.33 29.59
Bra001605.1-P Field mustard extracellular 37.89 29.42
CDY30105 Canola extracellular 37.61 29.4
CDX75843 Canola extracellular 37.89 29.36
CDY58462 Canola extracellular 37.89 29.36
AT4G32370.1 Thale cress extracellular 28.49 29.24
CDX97703 Canola extracellular 37.61 29.2
AT3G15720.1 Thale cress extracellular 37.89 29.17
Bra027211.1-P Field mustard extracellular 37.32 29.05
CDX69397 Canola extracellular 33.33 28.96
CDX97704 Canola extracellular 37.32 28.73
CDY30107 Canola extracellular 37.32 28.73
Bra027210.1-P Field mustard extracellular 37.04 28.51
TraesCS1B01G382800.1 Wheat extracellular 34.76 28.11
CDY39884 Canola extracellular 35.61 28.09
TraesCS6B01G118000.2 Wheat extracellular, golgi, vacuole 41.03 27.27
TraesCS1B01G322500.1 Wheat extracellular 37.04 26.86
AT5G27530.1 Thale cress cytosol 34.76 26.64
TraesCS3B01G020300.1 Wheat extracellular 33.62 26.64
Bra040077.1-P Field mustard extracellular 27.64 26.58
AT4G32380.1 Thale cress extracellular 33.9 26.27
TraesCS7B01G230600.1 Wheat extracellular 35.33 25.46
TraesCS1B01G448100.1 Wheat extracellular 37.32 24.72
AT4G32375.1 Thale cress extracellular 28.49 23.64
TraesCS3B01G258600.2 Wheat extracellular 35.9 23.46
Protein Annotations
EnsemblPlants:TraesCS2B01G423400.1EnsemblPlantsGene:TraesCS2B01G423400Gene3D:2.160.20.10GO:GO:0003674GO:GO:0003824GO:GO:0004650
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_28InterPro:IPR012334
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulencePANTHER:PTHR31375PANTHER:PTHR31375:SF45PFAM:PF00295ScanProsite:PS00502
SEG:segSignalP:SignalP-noTMSUPFAM:SSF51126MapMan:50.3.2::
Description
No Description!
Coordinates
chr2B:+:608802255..608804015
Molecular Weight (calculated)
37580.6 Da
IEP (calculated)
8.603
GRAVY (calculated)
-0.158
Length
351 amino acids
Sequence
(BLAST)
001: MDAWTAACGA RGWSATLLVP AAKSFLVGPT RFSGPCASSR ITVQVMGTIT APPARPWSEK NYWLMFYQVH GLTVTGGSTG LLDGRGGTWW GDKCKGHADC
101: IPKAPTSLVV MKCADVELSQ FRSKNSPQMH IAVSQSSKVH LTQLTITAPW DSPNTDGVHV DRSQDVRVTR STIGTGDDCI SIGPGSRFVT VDGIVCGPGH
201: GVSVGSLGRK GATESVEYID VKNVQFINTA NGARIKTWQG GKGYAKSISF TDIKFTNVDH PVVINQFYVD RHDVPNMGAV VLSNITYTNL KGTSRYKTAV
301: EFDCSESGSC TNIHVNSMAI TAAYVGETAA RCQNAQGDTS GYVYPKIPCL R
Best Arabidopsis Sequence Match ( AT3G15720.3 )
(BLAST)
001: MKKTWFLNFS LFFLQIFTSS NALDVTQFGA VGDGVTDDSQ AFLKAWEAVC SGTGDGQFVV PAGMTFMLQP LKFQGSCKST PVFVQMLGKL VAPSKGNWKG
101: DKDQWILFTD IEGLVIEGDG EINGQGSSWW EHKGSRPTAL KFRSCNNLRL SGLTHLDSPM AHIHISECNY VTISSLRINA PESSPNTDGI DVGASSNVVI
201: QDCIIATGDD CIAINSGTSN IHISGIDCGP GHGISIGSLG KDGETATVEN VCVQNCNFRG TMNGARIKTW QGGSGYARMI TFNGITLDNV ENPIIIDQFY
301: NGGDSDNAKD RKSSAVEVSK VVFSNFIGTS KSEYGVDFRC SERVPCTEIF LRDMKIETAS SGSGQVAQGQ CLNVRGASTI AVPGLECLEL STDMFSSAQL
401: LEQTCMSAQS VQPRTTTQPM QDPIWVFQSR GKQLRVYNIA ILVSFISLVT YILAR
Arabidopsis Description
Probable polygalacturonase At3g15720 [Source:UniProtKB/Swiss-Prot;Acc:Q9LW07]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.