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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023600.1-P Field mustard extracellular 99.01 93.93
CDY02729 Canola extracellular 95.57 90.65
CDY16952 Canola extracellular 75.62 70.74
AT5G17200.1 Thale cress extracellular 72.17 69.6
CDX69397 Canola extracellular 68.47 68.81
CDY50769 Canola extracellular 37.44 44.44
CDY39404 Canola extracellular 42.61 43.36
PGSC0003DMT400056828 Potato extracellular 42.36 43.22
PGSC0003DMT400008955 Potato extracellular 36.7 42.82
CDY69377 Canola extracellular 42.12 42.75
CDY47032 Canola extracellular 41.87 42.18
CDX72553 Canola extracellular 41.87 42.18
CDY39399 Canola extracellular 41.38 42.0
CDX73440 Canola extracellular 40.64 41.25
CDY56952 Canola extracellular 39.9 38.48
CDX74418 Canola extracellular 39.66 38.15
CDX79907 Canola extracellular 40.64 37.93
CDX75843 Canola extracellular 42.12 37.75
CDX75239 Canola cytosol 37.68 37.68
CDX68839 Canola cytosol 37.68 37.68
CDY58462 Canola extracellular 41.87 37.53
GSMUA_Achr11P... Banana extracellular 38.42 37.5
CDY48768 Canola extracellular 40.15 37.47
GSMUA_Achr9P22320_001 Banana extracellular 37.93 37.29
CDY30105 Canola extracellular 41.13 37.19
CDX97704 Canola extracellular 41.63 37.06
CDY14791 Canola extracellular 39.41 36.95
CDY30107 Canola extracellular 41.38 36.84
CDX72025 Canola extracellular 39.16 36.81
TraesCS2B01G423400.1 Wheat plastid 31.77 36.75
CDX97703 Canola extracellular 40.89 36.73
CDY06902 Canola extracellular 39.16 36.72
CDX67693 Canola extracellular 39.16 36.72
TraesCS2A01G405600.1 Wheat extracellular 28.82 36.68
TraesCS2B01G423300.1 Wheat extracellular 36.21 36.66
TraesCS2D01G402300.1 Wheat extracellular 30.05 36.64
TraesCS2A01G405300.1 Wheat extracellular, nucleus 36.45 36.54
GSMUA_Achr4P13200_001 Banana extracellular 37.68 36.26
TraesCS2D01G402200.1 Wheat extracellular 34.73 36.06
CDX74019 Canola extracellular 38.67 35.93
CDY28005 Canola extracellular 37.19 35.87
CDY35976 Canola extracellular 37.19 35.87
CDY07963 Canola extracellular 38.67 35.84
HORVU2Hr1G096130.1 Barley extracellular 35.71 35.8
KXG26899 Sorghum extracellular 36.95 35.71
TraesCS2D01G402100.1 Wheat extracellular 35.47 35.56
CDY37571 Canola cytosol 32.51 35.29
CDY39884 Canola extracellular 38.67 35.28
CDY38648 Canola cytosol 32.27 35.03
TraesCS2A01G405100.1 Wheat extracellular 35.96 35.01
TraesCS2B01G423200.1 Wheat extracellular 34.98 33.41
TraesCS2D01G402000.1 Wheat extracellular 34.98 33.18
CDY09873 Canola extracellular 34.98 32.35
CDX69569 Canola extracellular 34.73 32.12
CDY57689 Canola extracellular 35.22 31.99
CDY54312 Canola extracellular 34.98 31.98
CDY04708 Canola plastid 21.67 31.77
CDY41695 Canola extracellular 33.74 31.49
CDX95284 Canola extracellular 31.03 31.19
Zm00001d039668_P001 Maize plastid 32.51 30.21
CDY13645 Canola extracellular 33.74 29.15
CDY54292 Canola cytosol 31.53 28.7
CDY25786 Canola cytosol 31.53 28.7
CDY47139 Canola extracellular 33.0 28.69
CDX83631 Canola extracellular 33.25 28.66
CDX93644 Canola extracellular 33.25 28.6
CDY43307 Canola extracellular 33.25 28.54
CDY11585 Canola extracellular 32.76 28.48
CDY67535 Canola extracellular 21.43 27.97
CDY61868 Canola extracellular 36.95 27.32
CDX77909 Canola extracellular 33.0 27.29
CDY44150 Canola extracellular, golgi, plastid 33.74 27.29
CDY06100 Canola extracellular 28.57 27.17
CDX89966 Canola extracellular 32.51 26.88
Os01t0172900-00 Rice nucleus 19.46 26.78
CDY71357 Canola extracellular, vacuole 20.69 26.5
CDY15246 Canola extracellular 32.02 26.48
CDY54228 Canola extracellular, golgi, vacuole 33.0 25.38
CDY37962 Canola extracellular, golgi, vacuole 33.25 25.38
CDX93397 Canola extracellular, golgi, vacuole 33.0 25.14
CDY20612 Canola extracellular 32.51 24.86
CDY20962 Canola extracellular, golgi, vacuole 32.51 24.86
CDY34877 Canola extracellular, golgi 29.8 24.74
CDY47212 Canola extracellular 31.53 23.88
CDY41445 Canola endoplasmic reticulum 32.51 23.74
CDY50367 Canola extracellular, golgi 31.28 23.69
GSMUA_Achr4P06370_001 Banana extracellular 36.7 19.76
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078D861EnsemblPlants:CDX85471ProteinID:CDX85471ProteinID:CDX85471.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016043GO:GO:0016787GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00143169001InterPro:Glyco_hydro_28
InterPro:IPR012334PFAM:PF00295ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF42InterPro:PbH1
InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EEC9E8
Description
BnaA02g03420D
Coordinates
chrLK031842:+:246705..248773
Molecular Weight (calculated)
43789.2 Da
IEP (calculated)
8.749
GRAVY (calculated)
-0.136
Length
406 amino acids
Sequence
(BLAST)
001: MNKSLLFFVF LCLLIQISKL GFCLERKAHN GNNGLKRHGF ISVTSFGAVG DGKADDTKAF LKAWKAVCKG GSRGKTNFVV PLGKTFMLKP LTFEGPCKSS
101: SITFLIRGNL VAPGYTWHAG NYPAWISFDS IYGLAITGGG TINGRGSVWW RNVQHRPTAM HFNNCNGLHI SNLHHLNSPR NHISLSCSEN ISLSGLNMTA
201: PGDSPNTDGI DISNCRGVDI RDSVIATGDD CIAINGGSSY INITGIFCGP GHGISVGSLG ENGHFSAVEE VRVGNCTLSN TKNGVRIKTF QNGLGFARKI
301: SFEDIKMVAS ENPIIIEQNY HDQGKNGELS FEYSVRVSDV RYSRIQGSSA SSEAITMNCD ANLGCVDIVM DHVNIVSAKS GHKVSASCKN VHGKYFDSVI
401: SCQKKH
Best Arabidopsis Sequence Match ( AT5G17200.1 )
(BLAST)
001: MKSSLFFVLL CLFQINKLCF CLEEESLKVK NGFGSNGFIS VTSFGAIGDG KTDDTKAFLK AWEAVCKGGH NRKILVPQGK TFMLKPLTFI GPCKSSTISL
101: SIRGNLVAPG YTWYAGRYTT WISFDSINGL VVTGGGTIDG RGSLWWGNVN NRPCAMHFNN CNGLRISNLR HLNSPRNHVG LSCSQNIEVR GLRMTAPGDS
201: PNTDGIDISN CIGVHIHDSV IATGDDCIAI NSGSSHINIT GIFCGPGHGI SVGSLGVTGD FETVEEVRVK NCTFTKTQNG VRIKTYQNGS GYARKISFED
301: INMVASENPI IIDQTYHNGG TNGGISKSSS SYQNCHLTAK QRTPSGNGKG VKVTDVRYAR IRGSSASDQD ITLNCDADLG CSDIVMDNVN MVSATFGHKL
401: FSSCKNAHGS LFASKVDCLK H
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9FFI9]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.