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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY47139 Canola extracellular 98.93 98.93
Bra016213.1-P Field mustard extracellular 98.72 98.72
AT1G70500.1 Thale cress extracellular 83.73 83.55
CDY54292 Canola cytosol 74.3 77.8
CDY25786 Canola cytosol 74.3 77.8
CDY04708 Canola plastid 46.04 77.62
CDY44150 Canola extracellular, golgi, plastid 75.16 69.92
Solyc09g098270.2.1 Tomato cytosol 61.24 66.05
CDY41445 Canola endoplasmic reticulum 77.73 65.29
Solyc04g025440.2.1 Tomato extracellular 62.53 63.48
PGSC0003DMT400055713 Potato extracellular 62.1 63.32
PGSC0003DMT400080722 Potato extracellular 61.67 62.61
GSMUA_Achr7P01870_001 Banana cytosol 55.46 58.86
GSMUA_Achr4P22100_001 Banana extracellular 55.03 55.39
EES04449 Sorghum extracellular 53.53 48.08
Zm00001d015129_P001 Maize mitochondrion 51.18 46.32
Os02t0130200-01 Rice extracellular, golgi 49.68 45.67
TraesCS6B01G118000.2 Wheat extracellular, golgi, vacuole 51.39 45.45
TraesCS6A01G084500.1 Wheat extracellular, golgi, vacuole 50.54 44.95
HORVU6Hr1G015390.2 Barley extracellular, golgi 50.11 44.32
TraesCSU01G113500.1 Wheat extracellular, golgi, vacuole 49.89 44.13
CDY54312 Canola extracellular 41.33 43.47
CDY57689 Canola extracellular 41.54 43.4
CDY48768 Canola extracellular 38.97 41.84
CDY14791 Canola extracellular 38.54 41.57
CDY06902 Canola extracellular 38.33 41.34
CDX72025 Canola extracellular 37.9 40.97
CDX67693 Canola extracellular 37.9 40.88
CDX79907 Canola extracellular 37.69 40.46
CDY35976 Canola extracellular 35.97 39.91
CDY28005 Canola extracellular 35.97 39.91
CDX74019 Canola extracellular 37.05 39.59
CDY07963 Canola extracellular 37.05 39.5
CDY41695 Canola extracellular 36.62 39.31
CDY67535 Canola extracellular 26.12 39.23
CDX95284 Canola extracellular 33.83 39.11
CDX69569 Canola extracellular 36.62 38.95
CDY09873 Canola extracellular 36.62 38.95
CDY37571 Canola cytosol 30.62 38.24
CDY38648 Canola cytosol 30.41 37.97
CDY56952 Canola extracellular 33.83 37.53
CDX74418 Canola extracellular 33.83 37.44
CDX77909 Canola extracellular 38.54 36.66
CDY47032 Canola extracellular 31.48 36.48
CDY15246 Canola extracellular 38.33 36.46
CDX89966 Canola extracellular 38.12 36.25
CDX72553 Canola extracellular 31.05 35.98
CDY69377 Canola extracellular 30.19 35.25
CDY39404 Canola extracellular 29.98 35.09
CDX73440 Canola extracellular 29.98 35.0
CDY43307 Canola extracellular 35.33 34.88
CDX93644 Canola extracellular 35.12 34.75
CDY58462 Canola extracellular 33.19 34.22
CDY50769 Canola extracellular 25.05 34.21
CDX75843 Canola extracellular 32.98 34.0
CDY13645 Canola extracellular 34.05 33.83
CDX83631 Canola extracellular 34.05 33.76
CDY71357 Canola extracellular, vacuole 22.91 33.75
CDY39399 Canola extracellular 28.91 33.75
CDY30105 Canola extracellular 32.12 33.41
CDX97703 Canola extracellular 32.33 33.41
KRG99363 Soybean extracellular 62.31 33.03
CDX85471 Canola extracellular 28.48 32.76
CDY47212 Canola extracellular 36.83 32.09
CDY50367 Canola extracellular, golgi 36.83 32.09
CDY30107 Canola extracellular 31.26 32.02
CDX97704 Canola extracellular 31.26 32.02
CDX75239 Canola cytosol 27.62 31.77
CDY16952 Canola extracellular 29.34 31.57
CDX68839 Canola cytosol 27.41 31.53
CDX93397 Canola extracellular, golgi, vacuole 35.97 31.52
CDY37962 Canola extracellular, golgi, vacuole 35.76 31.39
CDY02729 Canola extracellular 28.69 31.31
CDY20612 Canola extracellular 35.55 31.26
CDY20962 Canola extracellular, golgi, vacuole 35.55 31.26
CDY54228 Canola extracellular, golgi, vacuole 35.33 31.25
CDY61868 Canola extracellular 36.4 30.97
CDX69397 Canola extracellular 26.34 30.45
CDY34877 Canola extracellular, golgi 31.48 30.06
CDY06100 Canola extracellular 27.19 29.74
CDY39884 Canola extracellular 27.62 28.99
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078FB28UniProt:A0A078FB28EnsemblPlants:CDY11585ProteinID:CDY11585
ProteinID:CDY11585.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00049699001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF29InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EB22F2SEG:seg:
Description
BnaC06g31540DBnaC06g31540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB28]
Coordinates
chrLK032012:+:288367..290410
Molecular Weight (calculated)
50486.5 Da
IEP (calculated)
5.119
GRAVY (calculated)
-0.144
Length
467 amino acids
Sequence
(BLAST)
001: MDRLFILSLL ALLMVTSYRA AGETSYRELD ILGELENLDV PQDDIDDDVT FFDFSLFTSQ FSGKNLVNVD SFGAAGDGVS DDTQAFVSAW KIACSAPRSV
101: LLVPQGRSYL VNATKFNGPC QENLIIQIDG TIVAPDDPSQ WNPRFQRVWL EFSKLQGVIF QGNGVIDGSG TKWWAASCKK NKSNPCIGAP TALTIESSSN
201: VYVRGLTIRN SQQMHLIIAR SNTVRVSRVM VTSPGDSPNT DGIHITASTN VIVQDCKIST GDDCVSIVNA SSRIKMKKIY CGPGHGISIG SLGRGNSTAT
301: VSAIVLDTAV LKNTTNGLRI KTWQGGNGYV KGVRFENVEM HDVANPIIID QFYCDSPSTC QNQTSAVHIT EIMYRNITGT TKSKNAIKFA CSDAVPCSHI
401: VLNNVNLEGN DGKVEAYCNS AEGFGYGVVH PSADCLDSHD NKGLDQTPYL SETVLVGEDA KNAHDEL
Best Arabidopsis Sequence Match ( AT1G70500.1 )
(BLAST)
001: MIKPFIISLF ALLMVASYGA TGKMLFKELD ILGKLENLDV PEDDIEDDVT FFDFSSFTSQ YSGKNLVNVD SFNASGDGVS DDTQAFIRAW TMACSAPNSV
101: LLVPQGRSYL VNATKFDGPC QEKLIIQIDG TIIAPDEPSQ WDPKFPRNWL QFSKLQGVVF QGNGVIDGSG TKWWAASCKK NKSNPCVGAP TALTIYSSSN
201: VYVRGLTIRN SQQMHLIIQR STTVRISRVM VTSPGDSPNT DGIHITASTD VVVQDSKIST GDDCVSIVNG SAKIKMKRIY CGPGHGISIG SLGQGHSKGT
301: VTAVVLETAF LKNTTNGLRI KTWQGGNGYV KGVRFENVVM QDVANPIIID QFYCDSPSTC QNQTSAVHIS EIMYRNITGT TKSSKAINFK CSDAVPCSHI
401: VLNNINLEGN DGKVEAYCNS AEGFGYGVVH PSADCLYSHD DKSLNQTDQY LAETIMVEKE TENAHDEL
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9CAL5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.