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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX72025 Canola extracellular 77.52 76.62
Bra007332.1-P Field mustard extracellular 77.05 76.16
AT3G57510.1 Thale cress extracellular 67.68 67.05
CDX67693 Canola extracellular 66.98 66.05
CDY06902 Canola extracellular 51.76 51.04
CDY14791 Canola extracellular 51.76 51.04
CDX79907 Canola extracellular 51.76 50.8
CDY48768 Canola extracellular 51.76 50.8
CDY61868 Canola extracellular 63.0 49.0
Solyc04g015530.1.1 Tomato cytosol 34.89 38.01
KRH71979 Soybean extracellular 37.94 37.85
VIT_08s0007g07780.t01 Wine grape extracellular 38.17 37.56
VIT_08s0007g07750.t01 Wine grape extracellular 38.64 37.33
VIT_08s0007g07770.t01 Wine grape extracellular 38.64 37.33
VIT_08s0007g08330.t01 Wine grape extracellular 38.64 37.16
VIT_08s0007g07760.t01 Wine grape extracellular 37.0 36.32
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus 32.79 35.26
KRH66955 Soybean extracellular 37.47 34.48
KRH33163 Soybean extracellular, plastid 38.17 34.17
Solyc10g080210.1.1 Tomato extracellular 36.53 34.14
CDY07963 Canola extracellular 33.96 33.1
CDY35976 Canola extracellular 32.32 32.78
CDX74019 Canola extracellular 33.49 32.72
CDY28005 Canola extracellular 32.08 32.54
PGSC0003DMT400070039 Potato cytosol 29.98 31.22
KRG95273 Soybean extracellular 37.7 30.78
KXG39856 Sorghum extracellular 29.74 29.53
GSMUA_Achr1P22940_001 Banana extracellular 29.98 29.02
Os03t0216800-01 Rice extracellular 29.74 29.0
HORVU0Hr1G038940.1 Barley cytosol 27.17 28.71
CDX85471 Canola extracellular 27.17 28.57
TraesCS4B01G244300.1 Wheat extracellular 28.81 28.41
TraesCS4D01G243600.1 Wheat extracellular 28.57 28.18
CDY16952 Canola extracellular 28.57 28.11
CDY71357 Canola extracellular, vacuole 20.84 28.08
CDY02729 Canola extracellular 27.87 27.8
TraesCS4A01G066700.1 Wheat extracellular 28.1 27.71
CDY54312 Canola extracellular 28.81 27.7
CDY57689 Canola extracellular 28.57 27.29
CDY11585 Canola extracellular 29.74 27.19
Zm00001d048079_P001 Maize extracellular 29.27 27.06
CDY37571 Canola cytosol 23.65 27.01
CDY47139 Canola extracellular 29.27 26.77
CDY38648 Canola cytosol 23.18 26.47
CDX69397 Canola extracellular 24.82 26.24
CDY54292 Canola cytosol 26.93 25.78
CDX73440 Canola extracellular 24.12 25.75
CDY25786 Canola cytosol 26.7 25.56
CDY39404 Canola extracellular 23.65 25.31
CDY41695 Canola extracellular 25.76 25.29
CDX69569 Canola extracellular 26.0 25.28
CDY69377 Canola extracellular 23.65 25.25
CDY39399 Canola extracellular 23.65 25.25
CDY56952 Canola extracellular 24.59 24.94
CDY09873 Canola extracellular 25.53 24.83
CDX97703 Canola extracellular 26.23 24.78
CDY30105 Canola extracellular 26.0 24.72
CDX74418 Canola extracellular 24.36 24.64
CDX72553 Canola extracellular 22.95 24.32
CDY43307 Canola extracellular 26.93 24.31
CDY50769 Canola extracellular 19.44 24.27
CDX93644 Canola extracellular 26.7 24.15
CDY44150 Canola extracellular, golgi, plastid 28.34 24.1
CDX95284 Canola extracellular 22.25 23.51
CDY30107 Canola extracellular 25.06 23.46
CDX75843 Canola extracellular 24.82 23.4
CDY47032 Canola extracellular 22.01 23.33
CDX97704 Canola extracellular 24.82 23.25
CDY58462 Canola extracellular 24.36 22.96
CDY15246 Canola extracellular 26.0 22.61
CDX89966 Canola extracellular 25.76 22.4
CDX77909 Canola extracellular 25.76 22.4
CDX75239 Canola cytosol 21.08 22.17
CDX68839 Canola cytosol 21.08 22.17
CDY13645 Canola extracellular 24.36 22.13
CDX83631 Canola extracellular 24.36 22.08
CDY39884 Canola extracellular 22.72 21.8
CDY41445 Canola endoplasmic reticulum 27.87 21.4
CDY04708 Canola plastid 13.82 21.3
CDY67535 Canola extracellular 14.52 19.94
CDY54228 Canola extracellular, golgi, vacuole 24.12 19.51
CDY50367 Canola extracellular, golgi 23.89 19.03
CDY47212 Canola extracellular 23.89 19.03
CDY20962 Canola extracellular, golgi, vacuole 23.42 18.83
CDY37962 Canola extracellular, golgi, vacuole 23.42 18.8
CDX93397 Canola extracellular, golgi, vacuole 23.42 18.76
CDY20612 Canola extracellular 23.18 18.64
CDY34877 Canola extracellular, golgi 20.84 18.2
Protein Annotations
Gene3D:2.160.20.10MapMan:50.3.2GO:A0A078EVP4EnsemblPlants:CDY06100ProteinID:CDY06100ProteinID:CDY06100.1
GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00121974001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295PANTHER:PTHR31375
PANTHER:PTHR31375:SF3InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulenceSUPFAM:SSF51126SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EE84F3SEG:seg::::
Description
BnaA09g36800D
Coordinates
chrLK031967:+:762764..764702
Molecular Weight (calculated)
48686.4 Da
IEP (calculated)
8.053
GRAVY (calculated)
-0.020
Length
427 amino acids
Sequence
(BLAST)
001: MARCCVPLAI FLGVLLMLSW CEALSSNVDD GYGHEDGGYE SDSLIKLNND EVLTLKSSDK PTPESSTVSV SDFGAKGDGK TDDTQAFKKA WKKACSTKGV
101: TSFLVPKGKT YLLKSTQFRG PCKSLRSFQI LGTLSASTKR SDYNKDKNHW LILEDVNNLS VDGGSEGTVD GNGKIWWQNS CKIDRSKPCT KAPTALTFYN
201: LMNLNVKNLR VRNAQQIQIS VEKCNNVNIK NVEITAPDDS PNTDGIHITN TQNIRVSNSH IGTGNNDPYI YIYIYIYIYI LLVVSIYIYI YIYIYIYIYI
301: YIYIYIYIYI YIYIYIYIYI YIYIYIYIYI YIYIYIYIYI YIYIYIYIYI YNLICPNLYF DSAVQVNNVV YRNISGTSAT DVAITFDCSE KYPCKGIVLD
401: NVNIKGGTAS CKNANVKNQG NVSPQCS
Best Arabidopsis Sequence Match ( AT1G23460.1 )
(BLAST)
001: MMDKLFILSL LGLLLVTAYG AAGKMVYTDL DILDELENFD VLVDDDDDTK LLDWPSFTSR HSGKNLVNVD TFGAAGDGVS DDTQAFVSAW SKACSTSKSV
101: FLVPEGRRYL VNATKFNGPC EQKLIIQIDG TIVAPDEPSN WDSKFQRIWL EFSKLKGVVF QGKGVIDGSG SKWWAASCKK NKSNPCKSAP TALTIESSSG
201: VKVSGLTIQN SQQMNFIIAR SDSVRVSKVM VSSPGDSPNT DGIHITGSTN VILQDCKIGT GDDCVSIVNA SSNIKMKNIY CGPGHGISIG SLGKDNTTGI
301: VTQVVLDTAL LRETTNGLRI KTYQGGSGYV QGIRFTNVEM QDVANPILID QFYCDSPTTC QNQTSAVKIS QIMYRNITGT TKSAKAIKFA CSDTVPCSHI
401: VLNNVNLEGN DGQVEAYCNS AEGFGYGVIH PSADCLYSHD DKGLDQTHKS EEAETGHDEL
Arabidopsis Description
Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I672]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.