Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • golgi 5
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:nucleus
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74019 Canola extracellular 95.89 96.11
CDY35976 Canola extracellular 80.37 83.61
CDY28005 Canola extracellular 80.14 83.37
AT3G07970.1 Thale cress extracellular 79.91 79.73
VIT_13s0064g00760.t01 Wine grape cytosol 44.52 58.73
KRH23942 Soybean extracellular 53.2 52.95
KRH32949 Soybean extracellular 52.51 52.51
KRH13966 Soybean extracellular 52.51 52.39
KRH39858 Soybean extracellular 52.28 51.93
VIT_13s0064g00750.t01 Wine grape cytosol 52.28 50.22
GSMUA_Achr10P... Banana cytosol, extracellular, nucleus 45.43 50.13
CDX72025 Canola extracellular 47.72 48.38
CDX67693 Canola extracellular 47.72 48.27
PGSC0003DMT400017691 Potato extracellular 38.36 47.86
Solyc01g087280.1.1 Tomato extracellular 46.35 47.76
CDY14791 Canola extracellular 47.03 47.58
GSMUA_Achr1P22940_001 Banana extracellular 47.72 47.39
CDY06902 Canola extracellular 46.8 47.34
HORVU0Hr1G038940.1 Barley cytosol 43.61 47.28
CDX79907 Canola extracellular 46.12 46.44
CDY48768 Canola extracellular 45.89 46.21
TraesCS4A01G066700.1 Wheat extracellular 45.43 45.96
TraesCS4D01G243600.1 Wheat extracellular 44.75 45.27
TraesCS4B01G244300.1 Wheat extracellular 44.52 45.03
KXG39856 Sorghum extracellular 43.84 44.65
Os03t0216800-01 Rice extracellular 42.92 42.92
Zm00001d048079_P001 Maize extracellular 42.92 40.69
CDY04708 Canola plastid 25.34 40.07
CDX85471 Canola extracellular 35.84 38.67
CDY54292 Canola cytosol 38.58 37.89
CDY25786 Canola cytosol 38.36 37.67
CDY50769 Canola extracellular 29.22 37.43
CDY54312 Canola extracellular 37.9 37.39
CDY57689 Canola extracellular 38.13 37.36
CDY11585 Canola extracellular 39.5 37.05
CDY47139 Canola extracellular 39.5 37.05
CDY02729 Canola extracellular 36.07 36.92
CDY37571 Canola cytosol 31.51 36.9
CDY39404 Canola extracellular 33.56 36.84
CDX73440 Canola extracellular 33.33 36.5
CDY69377 Canola extracellular 33.33 36.5
CDX74418 Canola extracellular 34.93 36.26
CDY39399 Canola extracellular 33.1 36.25
CDY09873 Canola extracellular 36.3 36.22
CDY56952 Canola extracellular 34.7 36.1
CDY38648 Canola cytosol 30.82 36.1
CDY61868 Canola extracellular 45.21 36.07
CDX69569 Canola extracellular 36.07 35.99
CDY16952 Canola extracellular 35.62 35.94
CDY67535 Canola extracellular 25.11 35.37
CDX95284 Canola extracellular 32.42 35.15
CDY41695 Canola extracellular 34.7 34.94
CDX75843 Canola extracellular 35.84 34.66
CDX69397 Canola extracellular 31.96 34.65
CDX72553 Canola extracellular 31.74 34.49
CDY58462 Canola extracellular 35.62 34.44
CDY47032 Canola extracellular 31.28 33.99
CDX97704 Canola extracellular 35.39 33.99
CDY30107 Canola extracellular 35.39 33.99
CDX75239 Canola cytosol 31.51 33.99
CDY06100 Canola extracellular 33.1 33.96
CDY44150 Canola extracellular, golgi, plastid 38.81 33.86
CDX68839 Canola cytosol 31.28 33.74
CDY30105 Canola extracellular 34.47 33.63
CDX97703 Canola extracellular 34.7 33.63
CDY43307 Canola extracellular 35.62 32.98
CDX93644 Canola extracellular 35.39 32.84
CDX89966 Canola extracellular 35.39 31.57
CDY39884 Canola extracellular 31.74 31.24
CDY15246 Canola extracellular 34.93 31.16
CDX77909 Canola extracellular 34.7 30.96
CDY41445 Canola endoplasmic reticulum 39.27 30.94
CDX83631 Canola extracellular 33.1 30.79
CDY13645 Canola extracellular 32.88 30.64
CDY71357 Canola extracellular, vacuole 21.0 29.02
CDY54228 Canola extracellular, golgi, vacuole 34.47 28.6
CDY20962 Canola extracellular, golgi, vacuole 34.25 28.25
CDY20612 Canola extracellular 34.02 28.06
CDY37962 Canola extracellular, golgi, vacuole 34.02 28.01
CDY47212 Canola extracellular 34.02 27.8
CDY50367 Canola extracellular, golgi 34.02 27.8
CDX93397 Canola extracellular, golgi, vacuole 33.79 27.77
CDY34877 Canola extracellular, golgi 29.91 26.79
Protein Annotations
Gene3D:2.160.20.10MapMan:21.3.5.1.1GO:A0A078F885UniProt:A0A078F885EnsemblPlants:CDY07963ProteinID:CDY07963
ProteinID:CDY07963.1GO:GO:0003674GO:GO:0003824GO:GO:0004650GO:GO:0005575GO:GO:0005576
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016043GO:GO:0016787
GO:GO:0016798GO:GO:0071555EnsemblPlantsGene:GSBRNA2T00125176001InterPro:Glyco_hydro_28InterPro:IPR012334PFAM:PF00295
ScanProsite:PS00502PANTHER:PTHR31375PANTHER:PTHR31375:SF28InterPro:PbH1InterPro:Pectin_lyas_foldInterPro:Pectin_lyase_fold/virulence
SMART:SM00710SUPFAM:SSF51126SignalP:SignalP-noTMUniParc:UPI0004EE9995SEG:seg:
Description
BnaC03g35600DBnaC03g35600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F885]
Coordinates
chrLK031982:-:332390..334876
Molecular Weight (calculated)
48398.7 Da
IEP (calculated)
8.953
GRAVY (calculated)
-0.331
Length
438 amino acids
Sequence
(BLAST)
001: MYQKTIIFLT ILLTSLRSCS SSYPFDPKYY HSISPNAYYE TSHLHGHITH NRHMKDRHAH APRSSDRAFN VNSFGAKANG NDDSQAFMKA WEAACSSEGT
101: VYIVVPENRA YTLKSVKFSG PCKSSLIVFK IYGKIEAWKN PSDYRERRFW IVFQTVDNLR VEGGGRIDGN GKIWWPKSCK INPELPCQEA PTAVTFVECN
201: NLMVRNIRLE NAQQMHMRVQ NCENVKALNL MVTSPGDSPN TDGIHVTGTR NILIQDSIIR TGDDCISIVS GSENVRATGI TCGPGHGISI GSLGAHNSEA
301: YVSNVVVSKA TLIGTTNGVR IKTWQGGHGM AKNIIFQDIL MKNVTNPIII NQNYCDQTKA CPEQKSAVQV SNVLYKNIHG TSSRPEAIKF ECSKSIPCQG
401: ISLQNVELVD QITKQDVSKA TCSNVKLKSS GRLSSLCT
Best Arabidopsis Sequence Match ( AT3G07970.1 )
(BLAST)
001: MYEKIIILSV FLLTFLPSCF SSYPFNHRDD LFMSSNVYYE TNRQHQHGHN TRNSHLKNRH GYAPRSSPRS FNVNTFGAKA NGNDDSKAFM KAWEAACSST
101: GIVYIVAPKN RDYMLKAVTF SGPCKSSLII FKIYGRIEAW ENPSDYKERR HWIVFENVNN LRVEGGGRID GNGHIWWPKS CKINPQLPCL GAPTAVTFVE
201: CNNLRVSNIR LENAQQMHLT FQDCKNVKAL NLMVTSPADS PNTDGIHVSG TQNILIQDSI VRTGDDCISI VSGSENVRAT GITCGPGHGI SIGSLGEDNS
301: EAYVSNVVVN KATLIGTTNG VRIKTWQGGH GMAKNIIFQD IIMKNVTNPI IINQDYCDRV EACPEQKSAV QVSNVLYKNI QGTSSRPIAV KFVCSKNIPC
401: RGISMQNVKL VDQTQQDVSK ASCSNVKLDT RGNVSPLCT
Arabidopsis Description
QRT2Polygalacturonase QRT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB7]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.