Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH32949 | Soybean | extracellular | 92.48 | 92.69 |
| KRH23942 | Soybean | extracellular | 66.51 | 66.36 |
| KRH39858 | Soybean | extracellular | 66.29 | 65.99 |
| VIT_13s0064g00760.t01 | Wine grape | cytosol | 43.74 | 57.83 |
| Bra029690.1-P | Field mustard | cytosol | 51.25 | 55.42 |
| CDX74019 | Canola | extracellular | 53.08 | 53.32 |
| Bra001279.1-P | Field mustard | extracellular | 52.85 | 53.09 |
| CDY07963 | Canola | extracellular | 52.39 | 52.51 |
| KRH71979 | Soybean | extracellular | 51.03 | 52.34 |
| CDY35976 | Canola | extracellular | 49.43 | 51.54 |
| CDY28005 | Canola | extracellular | 49.43 | 51.54 |
| AT3G07970.1 | Thale cress | extracellular | 51.48 | 51.48 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, nucleus | 46.24 | 51.13 |
| VIT_13s0064g00750.t01 | Wine grape | cytosol | 53.08 | 51.1 |
| HORVU0Hr1G038940.1 | Barley | cytosol | 45.33 | 49.26 |
| PGSC0003DMT400017691 | Potato | extracellular | 39.18 | 49.0 |
| Solyc01g087280.1.1 | Tomato | extracellular | 46.7 | 48.24 |
| KRH66955 | Soybean | extracellular | 50.8 | 48.06 |
| TraesCS4D01G243600.1 | Wheat | extracellular | 46.01 | 46.65 |
| TraesCS4B01G244300.1 | Wheat | extracellular | 46.01 | 46.65 |
| KRH33163 | Soybean | extracellular, plastid | 50.34 | 46.33 |
| TraesCS4A01G066700.1 | Wheat | extracellular | 45.56 | 46.19 |
| KXG39856 | Sorghum | extracellular | 44.65 | 45.58 |
| GSMUA_Achr1P22940_001 | Banana | extracellular | 45.79 | 45.58 |
| Os03t0216800-01 | Rice | extracellular | 45.33 | 45.43 |
| KRG95273 | Soybean | extracellular | 50.34 | 42.26 |
| Zm00001d048079_P001 | Maize | extracellular | 44.42 | 42.21 |
| KRH14715 | Soybean | cytosol, extracellular, nucleus, plastid | 32.35 | 40.92 |
| KRH23786 | Soybean | cytosol, extracellular, nucleus, plastid | 32.8 | 40.0 |
| KRG88958 | Soybean | extracellular | 32.12 | 39.72 |
| KRH09752 | Soybean | extracellular | 40.55 | 38.86 |
| KRH23567 | Soybean | extracellular | 34.4 | 37.66 |
| KRH56581 | Soybean | extracellular | 36.9 | 36.9 |
| KRH48978 | Soybean | extracellular | 24.83 | 36.58 |
| KRG93260 | Soybean | extracellular | 36.67 | 36.34 |
| KRH66273 | Soybean | extracellular | 25.28 | 35.81 |
| KRH09740 | Soybean | extracellular | 34.4 | 35.53 |
| KRG96690 | Soybean | extracellular | 37.13 | 35.51 |
| KRH68311 | Soybean | extracellular | 36.9 | 35.06 |
| KRG96576 | Soybean | extracellular | 36.67 | 34.85 |
| KRH66276 | Soybean | extracellular | 28.02 | 34.65 |
| KRH66305 | Soybean | extracellular | 29.16 | 33.25 |
| KRH05150 | Soybean | extracellular | 20.05 | 32.71 |
| KRH42407 | Soybean | extracellular | 35.99 | 32.64 |
| KRH69173 | Soybean | extracellular | 35.08 | 32.56 |
| KRH36916 | Soybean | extracellular, nucleus | 35.08 | 32.49 |
| KRH58524 | Soybean | extracellular | 35.99 | 32.24 |
| KRH31755 | Soybean | extracellular | 34.85 | 32.21 |
| KRH11881 | Soybean | extracellular | 35.08 | 32.15 |
| KRH74551 | Soybean | extracellular | 32.35 | 30.8 |
| KRH69612 | Soybean | extracellular | 31.66 | 30.09 |
| KRH45648 | Soybean | nucleus | 35.99 | 29.37 |
| KRG99364 | Soybean | extracellular, nucleus | 35.54 | 29.0 |
| KRG99363 | Soybean | extracellular | 39.41 | 19.64 |
Protein Annotations
| EntrezGene:100796446 | Gene3D:2.160.20.10 | MapMan:21.3.5.1.1 | EMBL:ACUP02009806 | EnsemblPlantsGene:GLYMA_15G275400 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004650 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0071555 |
| InterPro:Glyco_hydro_28 | InterPro:IPR012334 | UniProt:K7ME92 | EnsemblPlants:KRH13966 | ProteinID:KRH13966 | ProteinID:KRH13966.1 |
| PFAM:PF00295 | ScanProsite:PS00502 | PANTHER:PTHR31375 | PANTHER:PTHR31375:SF28 | InterPro:PbH1 | InterPro:Pectin_lyas_fold |
| InterPro:Pectin_lyase_fold/virulence | SMART:SM00710 | SUPFAM:SSF51126 | TMHMM:TMhelix | UniParc:UPI000294DF35 | : |
Description
hypothetical protein
Coordinates
chr15:-:51404129..51408789
Molecular Weight (calculated)
48512.5 Da
IEP (calculated)
8.949
GRAVY (calculated)
-0.397
Length
439 amino acids
Sequence
(BLAST)
(BLAST)
001: MRMSPQSVAL PFFITMFVSF GVCFGSFLED TYHLTNYQRY SMKPNNEHFG IMTRAYGSTP STRSQRRINI DDYGAKASDG RDDTEAFEKA WDEACSTGGI
101: LVVPEEKIYH LKPITFSGPC LTNTAFRVYG TIKAWPKMST YQNDRLHWIK FENVTNLRVD GGGTINGNGR KWWENSCKRN ENLPCKPAPT AVTFYQCNNL
201: RVTNLRFKNA QQMHIRFQKC NNVTASNLIV RAPGNSPNTD GIHVTETRNI LISNSIIGTG DDCISIVSGS QNVRAIDVKC GPGHGISIGS LGAGDSKAQV
301: SNVLVNRATF TGTTNGVRIK TWQGGSGYAK NVKFVNITMR NVTNPIIVDQ NYCDQDKPCH EKDSAVKLSN IVYQNIRGTS ASEVAIKFDC SKTVPCKGIY
401: LQDVILTPED HGGGGSSTIA TCENVRYVHR GKFFPPCST
101: LVVPEEKIYH LKPITFSGPC LTNTAFRVYG TIKAWPKMST YQNDRLHWIK FENVTNLRVD GGGTINGNGR KWWENSCKRN ENLPCKPAPT AVTFYQCNNL
201: RVTNLRFKNA QQMHIRFQKC NNVTASNLIV RAPGNSPNTD GIHVTETRNI LISNSIIGTG DDCISIVSGS QNVRAIDVKC GPGHGISIGS LGAGDSKAQV
301: SNVLVNRATF TGTTNGVRIK TWQGGSGYAK NVKFVNITMR NVTNPIIVDQ NYCDQDKPCH EKDSAVKLSN IVYQNIRGTS ASEVAIKFDC SKTVPCKGIY
401: LQDVILTPED HGGGGSSTIA TCENVRYVHR GKFFPPCST
001: MYEKIIILSV FLLTFLPSCF SSYPFNHRDD LFMSSNVYYE TNRQHQHGHN TRNSHLKNRH GYAPRSSPRS FNVNTFGAKA NGNDDSKAFM KAWEAACSST
101: GIVYIVAPKN RDYMLKAVTF SGPCKSSLII FKIYGRIEAW ENPSDYKERR HWIVFENVNN LRVEGGGRID GNGHIWWPKS CKINPQLPCL GAPTAVTFVE
201: CNNLRVSNIR LENAQQMHLT FQDCKNVKAL NLMVTSPADS PNTDGIHVSG TQNILIQDSI VRTGDDCISI VSGSENVRAT GITCGPGHGI SIGSLGEDNS
301: EAYVSNVVVN KATLIGTTNG VRIKTWQGGH GMAKNIIFQD IIMKNVTNPI IINQDYCDRV EACPEQKSAV QVSNVLYKNI QGTSSRPIAV KFVCSKNIPC
401: RGISMQNVKL VDQTQQDVSK ASCSNVKLDT RGNVSPLCT
101: GIVYIVAPKN RDYMLKAVTF SGPCKSSLII FKIYGRIEAW ENPSDYKERR HWIVFENVNN LRVEGGGRID GNGHIWWPKS CKINPQLPCL GAPTAVTFVE
201: CNNLRVSNIR LENAQQMHLT FQDCKNVKAL NLMVTSPADS PNTDGIHVSG TQNILIQDSI VRTGDDCISI VSGSENVRAT GITCGPGHGI SIGSLGEDNS
301: EAYVSNVVVN KATLIGTTNG VRIKTWQGGH GMAKNIIFQD IIMKNVTNPI IINQDYCDRV EACPEQKSAV QVSNVLYKNI QGTSSRPIAV KFVCSKNIPC
401: RGISMQNVKL VDQTQQDVSK ASCSNVKLDT RGNVSPLCT
Arabidopsis Description
QRT2Polygalacturonase QRT2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SFB7]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.