Factsheet for AT2G41850.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 4
plasma membrane 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14791	Canola	extracellular	83.6	83.6
Bra016911.1-P	Field mustard	extracellular	83.37	83.37
CDY06902	Canola	extracellular	83.14	83.14
CDY48768	Canola	extracellular	83.14	82.76
CDX79907	Canola	extracellular	83.14	82.76
Bra004655.1-P	Field mustard	extracellular	81.76	82.71
Bra016912.1-P	Field mustard	extracellular, nucleus, peroxisome	80.83	78.12
AT3G57510.1	Thale cress	extracellular	68.82	69.14
KRH71979	Soybean	extracellular	54.04	54.67
VIT_08s0007g07750.t01	Wine grape	extracellular	55.66	54.52
VIT_08s0007g07760.t01	Wine grape	extracellular	54.5	54.25
VIT_08s0007g07770.t01	Wine grape	extracellular	55.2	54.07
Solyc04g015530.1.1	Tomato	cytosol	48.73	53.83
VIT_08s0007g07780.t01	Wine grape	extracellular	53.81	53.69
VIT_08s0007g08330.t01	Wine grape	extracellular	54.97	53.6
KRH66955	Soybean	extracellular	52.89	49.35
KRH33163	Soybean	extracellular, plastid	54.04	49.06
GSMUA_Achr10P...	Banana	cytosol, extracellular, nucleus	44.8	48.87
Solyc10g080210.1.1	Tomato	extracellular	51.27	48.58
PGSC0003DMT400070039	Potato	cytosol	44.8	47.32
AT3G07970.1	Thale cress	extracellular	46.88	46.24
GSMUA_Achr1P22940_001	Banana	extracellular	45.73	44.9
HORVU0Hr1G038940.1	Barley	cytosol	41.8	44.8
KRG95273	Soybean	extracellular	53.35	44.17
KXG39856	Sorghum	extracellular	43.19	43.49
TraesCS4A01G066700.1	Wheat	extracellular	43.42	43.42
TraesCS4B01G244300.1	Wheat	extracellular	42.96	42.96
TraesCS4D01G243600.1	Wheat	extracellular	42.96	42.96
Os03t0216800-01	Rice	extracellular	42.26	41.78
AT1G80170.1	Thale cress	extracellular	41.57	40.54
Zm00001d048079_P001	Maize	extracellular	42.73	40.04
AT1G23460.1	Thale cress	extracellular	41.34	38.91
AT1G56710.1	Thale cress	extracellular	38.11	38.02
AT4G35670.1	Thale cress	extracellular	34.18	37.56
AT1G70500.1	Thale cress	extracellular	40.42	37.39
AT5G14650.1	Thale cress	extracellular	37.18	37.01
AT5G17200.1	Thale cress	extracellular	35.8	36.82
AT5G44830.1	Thale cress	extracellular	27.94	36.45
AT5G39910.1	Thale cress	extracellular	30.02	34.85
AT5G44840.1	Thale cress	extracellular	30.95	34.27
AT1G80140.1	Thale cress	extracellular	26.56	34.23
AT3G15720.1	Thale cress	extracellular	36.03	34.21
AT4G01890.1	Thale cress	extracellular	36.72	34.05
AT4G32370.1	Thale cress	extracellular	26.79	33.92
AT1G02460.1	Thale cress	extracellular	37.64	33.2
AT1G48100.1	Thale cress	extracellular	36.03	32.84
AT3G26610.1	Thale cress	extracellular	34.87	32.13
AT5G27530.1	Thale cress	cytosol	32.33	30.57
AT1G10640.1	Thale cress	extracellular, golgi	36.72	29.89
AT4G32380.1	Thale cress	extracellular	30.25	28.92
AT1G60590.1	Thale cress	extracellular	34.64	27.78
AT4G32375.1	Thale cress	extracellular	25.4	26.0

Protein Annotations

Gene3D:2.160.20.10	MapMan:21.3.5.1.1	EntrezGene:818785	ProteinID:AAC02763.1	ProteinID:AEC10040.1	EMBL:AF083793
ArrayExpress:AT2G41850	EnsemblPlantsGene:AT2G41850	RefSeq:AT2G41850	TAIR:AT2G41850	RefSeq:AT2G41850-TAIR-G	EnsemblPlants:AT2G41850.1
TAIR:AT2G41850.1	EMBL:AY078936	Unigene:At.42781	GO:GO:0000003	GO:GO:0003674	GO:GO:0003824
GO:GO:0004650	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009791	GO:GO:0009830	GO:GO:0009838
GO:GO:0009901	GO:GO:0009908	GO:GO:0009987	GO:GO:0010047	GO:GO:0010227	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0071555
InterPro:Glyco_hydro_28	InterPro:IPR012334	RefSeq:NP_850359.1	PFAM:PF00295	Symbol:PGAZAT	PO:PO:0000146
PO:PO:0007616	PO:PO:0009029	PO:PO:0009031	PO:PO:0009046	PO:PO:0009047	PO:PO:0025281
ScanProsite:PS00502	PANTHER:PTHR31375	PANTHER:PTHR31375:SF3	InterPro:PbH1	InterPro:Pectin_lyas_fold	InterPro:Pectin_lyase_fold/virulence
UniProt:Q8RY29	SMART:SM00710	SUPFAM:SSF51126	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000162407
SEG:seg	:	:	:	:	:

Description

ADPG2Polygalacturonase ADPG2 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY29]

Coordinates

chr2:-:17461655..17464242

Molecular Weight (calculated)

46625.2 Da

IEP (calculated)

8.866

GRAVY (calculated)

-0.265

Length

433 amino acids

Sequence
(BLAST)

001: MARCTNLVTV FLLWALLMFS WCKASRISPN VYDHSYKRFK SDSLIKRRED ITGLRSFVRA SLRTPTTVSV SDFGAKGDGK TDDTQAFVNA WKKACSSNGA
101: VNLLVPKGNT YLLKSIQLTG PCNSILTVQI FGTLSASQKR SDYKDISKWI MFDGVNNLSV DGGDTGVVDG NGETWWQNSC KRNKAKPCTK APTALTFYNS
201: KSLIVKNLKV RNAQQIQISI EKCSNVQVSN VVVTAPADSP NTDGIHITNT QNIRVSESII GTGDDCISIE SGSQNVQIND ITCGPGHGIS IGSLGDDNSK
301: AFVSGVTVDG AKLSGTDNGV RIKTYQGGSG TASNIIFQNI QMDNVKNPII IDQDYCDKSK CTTEKSAVQV KNVVYRDISG TSASENAITF NCSKNYPCQG
401: IVLDRVNIKG GKATCTNANV VDKGAVLPQC NST

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.