CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 3
plastid 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH30885	Soybean	cytosol, nucleus, vacuole	91.0	91.82
PGSC0003DMT400018364	Potato	mitochondrion, nucleus	13.27	77.59
KRH17271	Soybean	cytosol, nucleus, plasma membrane	69.03	72.67
KRH72917	Soybean	cytosol, nucleus, plasma membrane	67.11	70.76
KRH34662	Soybean	cytosol	8.55	63.74
VIT_04s0079g00280.t01	Wine grape	cytosol, nucleus, plasma membrane	58.85	59.73
PGSC0003DMT400055322	Potato	nucleus	45.28	54.63
GSMUA_Achr1P02820_001	Banana	nucleus	29.79	54.3
GSMUA_Achr11P...	Banana	nucleus	30.53	54.05
Solyc02g036430.1.1	Tomato	nucleus	44.99	53.98
KRH09473	Soybean	nucleus	19.91	51.14
KRH38928	Soybean	nucleus	19.76	50.57
GSMUA_AchrUn_...	Banana	nucleus	25.81	49.3
KRH13792	Soybean	nucleus	24.04	46.97
Bra039745.1-P	Field mustard	nucleus	37.61	46.7
KRH43662	Soybean	nucleus	23.6	45.98
Bra021366.1-P	Field mustard	nucleus	32.45	45.83
CDY49932	Canola	nucleus	32.3	45.72
CDY43143	Canola	nucleus	32.15	45.61
AT5G17260.1	Thale cress	nucleus	32.01	45.59
CDY28745	Canola	cytosol	32.01	45.4
Bra032009.1-P	Field mustard	nucleus	32.01	45.4
AT3G03200.1	Thale cress	nucleus	31.86	45.09
AT1G65910.1	Thale cress	nucleus	41.74	44.85
CDY16943	Canola	nucleus	32.3	44.06
CDX70745	Canola	cytosol	32.01	43.93
CDY60870	Canola	nucleus	37.32	43.85
GSMUA_Achr8P13430_001	Banana	nucleus	39.23	43.82
Bra006392.1-P	Field mustard	cytosol	31.56	43.67
CDX78734	Canola	cytosol	31.56	43.67
Os03t0119966-01	Rice	nucleus	41.15	42.92
CDY16427	Canola	nucleus	37.32	42.52
Bra008567.1-P	Field mustard	nucleus	27.29	41.39
GSMUA_Achr11P...	Banana	cytosol, nucleus, plastid	33.92	41.37
EER95621	Sorghum	nucleus	41.3	41.06
TraesCS4D01G345300.1	Wheat	cytosol, nucleus, peroxisome	41.89	40.69
TraesCS4B01G350600.1	Wheat	cytosol, nucleus, peroxisome	41.45	40.67
CDY21216	Canola	nucleus	25.66	40.47
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	41.0	40.35
TraesCS5A01G519300.1	Wheat	cytosol, nucleus, peroxisome	41.15	40.2
Zm00001d048493_P004	Maize	nucleus	40.56	40.03
KRH04320	Soybean	nucleus	20.06	39.77
Zm00001d027395_P009	Maize	nucleus	38.79	39.61
KRH58218	Soybean	nucleus	20.06	39.42
KRH43549	Soybean	cytosol	15.93	33.44
KRH59567	Soybean	cytosol, golgi, nucleus	14.6	31.23
Solyc02g081270.2.1	Tomato	nucleus	43.07	28.38
KRH22653	Soybean	nucleus	14.45	26.42
KRG92124	Soybean	nucleus	17.55	25.59
KRH34660	Soybean	plastid	17.4	25.38
KRH64046	Soybean	nucleus	17.26	24.22
KRH16970	Soybean	nucleus	20.65	23.73
KRH53893	Soybean	nucleus	17.55	23.66
KRH64275	Soybean	nucleus	20.94	23.55
KRH53649	Soybean	nucleus	20.65	23.41
KRH72602	Soybean	nucleus	20.06	23.09
KRG91745	Soybean	nucleus	18.29	22.59
KRH35027	Soybean	nucleus	18.14	21.96
KRG92121	Soybean	cytosol	19.03	21.36
KRH26664	Soybean	nucleus	14.6	20.08

Protein Annotations

EntrezGene:100818019	MapMan:15.5.17	Gene3D:3.30.310.150	EMBL:ACUP02010833	EnsemblPlantsGene:GLYMA_18G043900	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	UniProt:I1MZI0	InterPro:IPR003441
InterPro:IPR036093	EnsemblPlants:KRG98003	ProteinID:KRG98003	ProteinID:KRG98003.1	InterPro:NAC-dom	InterPro:NAC_dom_sf
PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989	PANTHER:PTHR31989:SF6	SUPFAM:SSF101941	TMHMM:TMhelix
UniParc:UPI0002965410	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:3767587..3772179

Molecular Weight (calculated)

76542.3 Da

IEP (calculated)

5.607

GRAVY (calculated)

-0.505

Length

678 amino acids

Sequence
(BLAST)

001: MNMAPVSLPP GFRFHPTDEE LVSYYLKRKI NGRKIELEII HEVDLYKCEP WDLPGKSLLP GKDLEWYFFS PRDRKYPNGS RTNRATKSGY WKATGKDRKV
101: NSESRAIGMK KTLVYYRGRA PHGCRTGWVM HEYRLDETQC ETNSGLQDAY ALCRVCKKTA VIPPKVGDQH YVNVPSHVNQ ITSDQSSSID IEIYSEGRGE
201: VLESSNYLMP WDTCPSPNIN IGSALNININ GGTRDNNIGT WSHFLAEDLP NLPTSASSFP NYGSMSYPPS KVDIALECAR MQHRFTMPPL EVQDFPQVGI
301: SELKMAQASG SNMCGGSRNN ETDILQEILS VAHASHELIN QSNYSSHSQA LGANENNYAA PHESDFTFMV GNNYNRVNDM NTMGFVDKAW EDPNARSIEI
401: GDLDDGFKTE RMVENLRWVG MSSKNMEKGF MEEQKIVPIE HISNFQTNRE ENEVQVGSQQ HNNNKELNDT DIDDFSMGFI NGDDHNENFI DEGNINYSNS
501: TNFEVVEETK VSHGMFVSTR QVADTFFHQI APSQTVKVQL NPLMAEDQSI ENAVMVNQGP PFFRKFKAYV MGKLTKSSNT IASALVFLFA LLLMHCVFLK
601: EQVEDLKSDP KCFDGANSMK KIMRQPAENI IWNEQENFWS VGIKCGKGFS VVLKKIGIFL TISLALCTMW ANHVIVDS

Best Arabidopsis Sequence Match ( AT1G65910.1 )
(BLAST)

001: MAPVSMPPGF RFHPTDEELV IYYLKRKING RTIELEIIPE IDLYKCEPWD LPGKSLLPSK DLEWFFFSPR DRKYPNGSRT NRATKAGYWK ATGKDRKVTS
101: HSRMVGTKKT LVYYRGRAPH GSRTDWVMHE YRLEEQECDS KSGIQDAYAL CRVFKKSALA NKIEEQHHGT KKNKGTTNSE QSTSSTCLYS DGMYENLENS
201: GYPVSPETGG LTQLGNNSSS DMETIENKWS QFMSHDTSFN FPPQSQYGTI SYPPSKVDIA LECARLQNRM LPPVPPLYVE GLTHNEYFGN NVANDTDEML
301: SKIIALAQAS HEPRNSLDSW DGGSASGNFH GDFNYSGEKV SCLEANVEAV DMQEHHVNFK EERLVENLRW VGVSSKELEK SFVEEHSTVI PIEDIWRYHN
401: DNQEQEHHDQ DGMDVNNNNG DVDDAFTLEF SENEHNENLL DKNDHETTSS SCFEVVKKVE VSHGLFVTTR QVTNTFFQQI VPSQTVIVYI NPTDGNECCH
501: SMTSKEEVHV RKKINPRING VSSTVLGQWR KFAHVIGFIP MLLLMRCVHR GNSNKNRGSE GYSRQPTRGD CNNRGTILMM ENAVVRRKIW KKKKEKNMVD
601: EQGFRFQDSF VLKKLGLSLA IILAVSTISL I

Arabidopsis Description

anac028NAC028 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.