Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G49530.1 | KRH41529 | AT5G19570.1 | 21798944 |
| AT3G49530.1 | KRH60241 | AT5G19570.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH64275 | Soybean | nucleus | 89.63 | 88.89 |
| KRH16970 | Soybean | nucleus | 56.86 | 57.63 |
| KRH72602 | Soybean | nucleus | 56.52 | 57.39 |
| KRH34662 | Soybean | cytosol | 8.53 | 56.04 |
| GSMUA_Achr11P... | Banana | cytosol | 15.22 | 48.15 |
| KRH09473 | Soybean | nucleus | 17.89 | 40.53 |
| KRH38928 | Soybean | nucleus | 17.89 | 40.38 |
| CDY00208 | Canola | nucleus | 27.93 | 38.66 |
| Bra019599.1-P | Field mustard | nucleus | 27.93 | 38.66 |
| AT5G24590.2 | Thale cress | nucleus | 28.76 | 38.14 |
| GSMUA_Achr2P11810_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 18.39 | 37.93 |
| CDX88115 | Canola | cytosol | 28.09 | 37.92 |
| Bra009774.1-P | Field mustard | nucleus | 28.43 | 37.36 |
| Bra036520.1-P | Field mustard | nucleus | 27.76 | 37.3 |
| CDY19828 | Canola | nucleus | 27.76 | 37.3 |
| AT3G49530.1 | Thale cress | nucleus | 28.93 | 36.89 |
| CDY08139 | Canola | nucleus | 28.26 | 36.42 |
| CDX80455 | Canola | nucleus | 27.76 | 36.4 |
| Bra017980.1-P | Field mustard | nucleus | 27.93 | 36.07 |
| CDY05939 | Canola | nucleus | 27.42 | 35.42 |
| VIT_16s0098g00760.t01 | Wine grape | mitochondrion | 35.95 | 33.39 |
| PGSC0003DMT400001498 | Potato | nucleus | 34.78 | 32.6 |
| PGSC0003DMT400069511 | Potato | nucleus | 33.95 | 32.22 |
| Solyc03g080090.2.1 | Tomato | nucleus | 33.78 | 32.11 |
| Solyc06g073050.2.1 | Tomato | nucleus | 31.77 | 31.93 |
| KRH13792 | Soybean | nucleus | 17.06 | 29.39 |
| KRH22653 | Soybean | nucleus | 18.06 | 29.11 |
| KRH43662 | Soybean | nucleus | 16.89 | 29.02 |
| KRH04320 | Soybean | nucleus | 16.56 | 28.95 |
| KRH58218 | Soybean | nucleus | 16.39 | 28.41 |
| KRH43549 | Soybean | cytosol | 15.22 | 28.17 |
| GSMUA_Achr4P29170_001 | Banana | nucleus | 25.92 | 26.96 |
| GSMUA_Achr1P03560_001 | Banana | nucleus | 24.92 | 25.96 |
| OQU79937 | Sorghum | nucleus | 28.26 | 25.45 |
| Zm00001d049540_P002 | Maize | cytosol | 27.76 | 25.11 |
| KRH59567 | Soybean | cytosol, golgi, nucleus | 13.04 | 24.61 |
| KRG92124 | Soybean | nucleus | 17.89 | 23.01 |
| Zm00001d024543_P001 | Maize | nucleus | 25.42 | 22.89 |
| TraesCS7D01G295100.1 | Wheat | nucleus | 26.25 | 22.59 |
| KRH34660 | Soybean | plastid | 17.56 | 22.58 |
| TraesCS7B01G187600.1 | Wheat | nucleus | 26.09 | 22.25 |
| KRG91745 | Soybean | nucleus | 20.4 | 22.22 |
| TraesCS7A01G299600.3 | Wheat | nucleus | 25.92 | 22.11 |
| HORVU7Hr1G070780.5 | Barley | nucleus | 25.92 | 22.02 |
| KRH26664 | Soybean | nucleus | 18.06 | 21.91 |
| Os08t0157900-01 | Rice | nucleus, plasma membrane | 26.59 | 21.81 |
| KRH72917 | Soybean | cytosol, nucleus, plasma membrane | 23.41 | 21.77 |
| KRH35027 | Soybean | nucleus | 20.23 | 21.61 |
| KRH17271 | Soybean | cytosol, nucleus, plasma membrane | 23.08 | 21.43 |
| KRH64046 | Soybean | nucleus | 17.06 | 21.12 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 26.59 | 20.95 |
| KRG98003 | Soybean | cytosol, nucleus, plasma membrane | 23.41 | 20.65 |
| KRH30885 | Soybean | cytosol, nucleus, vacuole | 23.08 | 20.54 |
| CDX87118 | Canola | nucleus | 27.93 | 20.07 |
| KRH53893 | Soybean | nucleus | 16.72 | 19.88 |
| KRG92121 | Soybean | cytosol | 18.39 | 18.21 |
Protein Annotations
| EntrezGene:100808469 | MapMan:15.5.17 | Gene3D:3.30.310.150 | UniProt:A0A0R4J3F6 | EMBL:ACUP02003480 | EnsemblPlantsGene:GLYMA_06G138100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR003441 |
| InterPro:IPR036093 | EnsemblPlants:KRH53649 | ProteinID:KRH53649 | ProteinID:KRH53649.1 | InterPro:NAC-dom | InterPro:NAC_dom_sf |
| PFAM:PF02365 | PFscan:PS51005 | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF54 | SUPFAM:SSF101941 | TMHMM:TMhelix |
| UniParc:UPI000189CF65 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:11271945..11275301
Molecular Weight (calculated)
67100.6 Da
IEP (calculated)
5.946
GRAVY (calculated)
-0.559
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSVDCYPSR TDDAAVVSLD SLPLGFRFRP TDEELVNYYL RQKINGNGRQ VWVIREIDVC KWEPWDMPGL SVVQTKDPEW FFFCPQDRKY PNGHRLNRAT
101: NNGYWKATGK DRRIKSGKDL IGMKKTLVFY TGRAPKGNRT NWVMHEYRPT LKELDGTNPG QNPYVLCRLF KKHDESLEVS HCDEAEQTAS TPVAYSTEEI
201: QSDLAVVAGS PSQVTEDDKH QAMIPAHSEE AISNVVTPVV CRSDRYDACH APNQIVLPTA EEFQPLNYYD PRNELLDDKL FSPVLAHIQP EFHYQANIES
301: DDWYGLQYGT NETNMSDFLN SVVNWDQVSF EDLNCQQQSY PLFNVKDSVL SSDLDSELAI MTCMHAGSAE GPNNGRKPLV ITSEFRSTTG IPVDCGGDEQ
401: KSNVGLFQNN SQRAFTDVNI GQVYNVVDDY EQRGIYSAVA SGNTGIIRRH REVQNEQLSS NSTQGTAQRR IRLSMATHGS NKMVKSGSCA QEELNLKSVI
501: AMEEKASESH ISDESSTLTN DGNELPKTSK SSGKRKISRQ ATKAGSTLGL KDFLLLRRVP YISKASSNRA KCSSVFVVSA FVMVTLVVFT DIWGYLKF
101: NNGYWKATGK DRRIKSGKDL IGMKKTLVFY TGRAPKGNRT NWVMHEYRPT LKELDGTNPG QNPYVLCRLF KKHDESLEVS HCDEAEQTAS TPVAYSTEEI
201: QSDLAVVAGS PSQVTEDDKH QAMIPAHSEE AISNVVTPVV CRSDRYDACH APNQIVLPTA EEFQPLNYYD PRNELLDDKL FSPVLAHIQP EFHYQANIES
301: DDWYGLQYGT NETNMSDFLN SVVNWDQVSF EDLNCQQQSY PLFNVKDSVL SSDLDSELAI MTCMHAGSAE GPNNGRKPLV ITSEFRSTTG IPVDCGGDEQ
401: KSNVGLFQNN SQRAFTDVNI GQVYNVVDDY EQRGIYSAVA SGNTGIIRRH REVQNEQLSS NSTQGTAQRR IRLSMATHGS NKMVKSGSCA QEELNLKSVI
501: AMEEKASESH ISDESSTLTN DGNELPKTSK SSGKRKISRQ ATKAGSTLGL KDFLLLRRVP YISKASSNRA KCSSVFVVSA FVMVTLVVFT DIWGYLKF
001: MGAVSMESLP LGFRFRPTDE ELVNHYLRLK INGRHSDVRV IPDIDVCKWE PWDLPALSVI KTDDPEWFFF CPRDRKYPNG HRSNRATDSG YWKATGKDRS
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN
501: GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV
101: IKSKKTLIGM KKTLVFYRGR APKGERTNWI MHEYRPTLKD LDGTSPGQSP YVLCRLFHKP DDRVNGVKSD EAAFTASNKY SPDDTSSDLV QETPSSDAAV
201: EKPSDYSGGC GYAHSNSTAD GTMIEAPEEN LWLSCDLEDQ KAPLPCMDSI YAGDFSYDEI GFQFQDGTSE PDVSLTELLE EVFNNPDDFS CEESISRENP
301: AVSPNGIFSS AKMLQSAAPE DAFFNDFMAF TDTDAEMAQL QYGSEGGASG WPSDTNSYYS DLVQQEQMIN HNTENNLTEG RGIKIRARQP QNRQSTGLIN
401: QGIAPRRIRL QLQSNSEVKE REEVNEGHTV IPEAKEAAAK YSEKSGSLVK PQIKLRARGT IGQVKGERFA DDEKFVVVTG TGAEQKETRR EAMEGGCNGN
501: GGCDGWGRDG YMEDTGEFMT HETQRERERE SNVV
Arabidopsis Description
NTL9NAC transcription factor-like 9 [Source:TAIR;Acc:AT4G35580]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.