Factsheet for Bra019599.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra020049.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G49530.1	Bra020049.1-P	AT5G19570.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY00208	Canola	nucleus	100.0	100.0
Bra017980.1-P	Field mustard	nucleus	73.38	68.47
AT3G49530.1	Thale cress	nucleus	70.37	64.82
Bra036520.1-P	Field mustard	nucleus	52.31	50.79
Bra009774.1-P	Field mustard	nucleus	52.55	49.89
GSMUA_Achr11P...	Banana	cytosol	20.37	46.56
GSMUA_Achr2P11810_001	Banana	cytosol, mitochondrion, nucleus, plastid	23.38	34.83
Bra022236.1-P	Field mustard	nucleus	19.68	34.69
Bra012626.1-P	Field mustard	nucleus	21.3	32.17
Bra003335.1-P	Field mustard	nucleus	21.76	31.23
Bra030807.1-P	Field mustard	nucleus	22.22	31.07
Bra013272.1-P	Field mustard	nucleus	20.6	30.48
Bra025012.1-P	Field mustard	nucleus	20.14	30.0
Bra022046.1-P	Field mustard	nucleus	20.14	29.59
KRH53649	Soybean	nucleus	38.66	27.93
KRH64275	Soybean	nucleus	38.89	27.86
KRH16970	Soybean	nucleus	37.73	27.63
KRH72602	Soybean	nucleus	37.5	27.5
Bra024263.1-P	Field mustard	nucleus	21.76	27.33
Bra035488.1-P	Field mustard	nucleus	17.82	26.92
Bra012024.1-P	Field mustard	cytosol, golgi, nucleus	21.06	26.38
Bra002403.1-P	Field mustard	cytosol	18.75	25.0
Bra006619.1-P	Field mustard	cytosol	19.21	24.63
Solyc06g073050.2.1	Tomato	nucleus	33.8	24.54
Bra021471.1-P	Field mustard	cytosol, golgi, nucleus	18.98	24.26
VIT_16s0098g00760.t01	Wine grape	mitochondrion	36.11	24.22
Bra020182.1-P	Field mustard	cytosol	19.21	24.2
PGSC0003DMT400069511	Potato	nucleus	34.72	23.81
Bra028640.1-P	Field mustard	nucleus	21.53	23.31
PGSC0003DMT400001498	Potato	nucleus	34.26	23.2
GSMUA_Achr1P03560_001	Banana	nucleus	30.79	23.17
Solyc03g080090.2.1	Tomato	nucleus	33.33	22.89
GSMUA_Achr4P29170_001	Banana	nucleus	30.32	22.78
Bra034118.1-P	Field mustard	nucleus	21.99	22.57
Bra001366.1-P	Field mustard	nucleus	21.76	22.33
Bra010193.1-P	Field mustard	nucleus	32.41	22.01
Bra001365.1-P	Field mustard	nucleus	21.76	21.81
Bra034119.1-P	Field mustard	nucleus	21.99	21.59
Bra029844.1-P	Field mustard	nucleus, plastid	21.99	20.88
Bra006019.1-P	Field mustard	nucleus	17.36	20.66
Bra032009.1-P	Field mustard	nucleus	22.69	20.5
Bra028790.1-P	Field mustard	cytosol, nucleus, plastid	23.84	20.44
OQU79937	Sorghum	nucleus	31.25	20.33
HORVU7Hr1G070780.5	Barley	nucleus	33.1	20.31
TraesCS7A01G299600.3	Wheat	nucleus	32.87	20.26
TraesCS7B01G187600.1	Wheat	nucleus	32.87	20.26
Zm00001d024543_P001	Maize	nucleus	31.02	20.18
TraesCS7D01G295100.1	Wheat	nucleus	32.41	20.14
Zm00001d049540_P002	Maize	cytosol	30.56	19.97
Bra009379.1-P	Field mustard	nucleus	20.83	19.82
Bra006392.1-P	Field mustard	cytosol	22.45	19.8
Bra021366.1-P	Field mustard	nucleus	21.76	19.58
Os08t0157900-01	Rice	nucleus, plasma membrane	32.64	19.34
Bra039745.1-P	Field mustard	nucleus	24.07	19.05
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	23.15	18.62
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	23.61	18.41
Bra012342.1-P	Field mustard	nucleus	21.53	18.27
Bra036744.1-P	Field mustard	nucleus	22.69	17.92
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	23.38	17.81
Bra028039.1-P	Field mustard	nucleus	22.92	17.81
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	31.25	17.79
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	21.53	17.03
Bra034439.1-P	Field mustard	nucleus	21.99	16.44
Bra008567.1-P	Field mustard	nucleus	16.9	16.33

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra019599	EnsemblPlants:Bra019599.1	EnsemblPlants:Bra019599.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093
UniProt:M4DSV6	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF54	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI000253EF73	SEG:seg	:

Description

AT3G49530 (E=1e-086) anac062 | anac062 (Arabidopsis NAC domain containing protein 62); transcription factor

Coordinates

chrA06:+:11853267..11854989

Molecular Weight (calculated)

48500.0 Da

IEP (calculated)

6.942

GRAVY (calculated)

-0.571

Length

432 amino acids

Sequence
(BLAST)

001: MNQNIKELSL DSLPVGLRFR PTDEELVRYY LRRKINGHDD DVKAIREIDI CKCEPWDLPD FSAIKTKDSE WLFFSPLDRK YPTGSRQNRS TIAGHWKATG
101: KDRKIKSGKN NVIGLKRTLV FHSGRAPKGT RTNWVMHEYR ATEHDLSGTN PGQNPFVICK LFKKQDPSLV DEAVSSPTSS PDETKVVVEA QGVKPESSLV
201: ISGDSRNGVW NEATTSKLGD LDWLSFPELE SLTVFSPLHE LGSSSSSFNA FLQPSSSDHD NTFQIQTQYG TNEEDTDVSR FLNSVLDFQD DLEDQDFVFP
301: SEFDGAVPDQ TAPAYQQQRS AGDMSDDVSR TGIKLQPRRE QPEGCSTDYI IHGNASRRLR LQTIKREVED TDGKAIKKGK LMRSKNRTGF LFKKIISVRC
401: SYGGLLRAAV VAVLFLISVC SLTADFRASL MI

Best Arabidopsis Sequence Match ( AT3G49530.1 )
(BLAST)

001: MNQNLHVLSM DSLPVGLRFR PTDEELIRYY LRRKINGHDD DVKAIREIDI CKWEPWDLPD FSVIKTKDSE WLYFCPLDRK YPSGSRQNRA TVAGYWKATG
101: KDRKIKSGKT NIIGVKRTLV FHAGRAPRGT RTNWIIHEYR ATEDDLSGTN PGQSPFVICK LFKKEELVLG EEDSKSDEVE EPAVSSPTVE VTKSEVSEVI
201: KTEDVKRHDI AESSLVISGD SHSDACDEAT TAELVDFKWY PELESLDFTL FSPLHSQVQS ELGSSYNTFQ PGSSNFSGNN NNSFQIQTQY GTNEVDTYIS
301: DFLDSILKSP DEDPEKHKYV LQSGFDVVAP DQIAQVCQQG SAVDMSNDVS VTGIQIKSRQ AQPSGYTNDY IAQGNGPRRL RLQSNFNGIN TKNPELQAIK
401: REAEDTVGES IKKRCGKLMR SKNVTGFVFK KITSVKCSYG GLFRAAVVAV VFLMSVCSLT VDFRASAVS

Arabidopsis Description

NAC062NAC domain-containing protein 62 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCK6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.