Factsheet for Bra028790.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14157	Canola	cytosol, nucleus, vacuole	92.06	89.92
CDY61762	Canola	cytosol, nucleus, plastid	91.67	89.02
Bra009456.1-P	Field mustard	cytosol, nucleus, plastid	83.13	75.63
Bra005804.1-P	Field mustard	cytosol, nucleus, vacuole	79.56	70.72
AT5G04410.1	Thale cress	cytosol, nucleus, plastid	78.97	70.19
KRH34662	Soybean	cytosol	12.1	67.03
Bra034120.1-P	Field mustard	cytosol, nucleus, plastid	60.12	56.42
VIT_13s0019g05240.t01	Wine grape	cytosol, nucleus, plastid	47.22	42.58
Solyc05g055470.2.1	Tomato	nucleus	45.44	42.1
PGSC0003DMT400060090	Potato	nucleus	43.06	40.56
Bra022236.1-P	Field mustard	nucleus	19.64	40.41
Solyc11g008000.1.1	Tomato	nucleus	42.26	40.34
PGSC0003DMT400079789	Potato	cytosol, nucleus, plastid	42.86	39.78
Bra025012.1-P	Field mustard	nucleus	20.44	35.52
Bra030807.1-P	Field mustard	nucleus	21.03	34.3
Bra022046.1-P	Field mustard	nucleus	19.84	34.01
Bra012626.1-P	Field mustard	nucleus	19.25	33.92
Bra003335.1-P	Field mustard	nucleus	20.04	33.55
Bra024263.1-P	Field mustard	nucleus	22.82	33.43
Bra013272.1-P	Field mustard	nucleus	19.05	32.88
Bra034118.1-P	Field mustard	nucleus	26.98	32.3
Bra034119.1-P	Field mustard	nucleus	27.98	32.05
Bra001365.1-P	Field mustard	nucleus	27.38	32.02
Bra035488.1-P	Field mustard	nucleus	18.06	31.82
Bra029844.1-P	Field mustard	nucleus, plastid	27.58	30.55
KRG92121	Soybean	cytosol	36.51	30.46
Bra001366.1-P	Field mustard	nucleus	25.4	30.4
Bra028640.1-P	Field mustard	nucleus	23.61	29.82
Bra006019.1-P	Field mustard	nucleus	20.44	28.37
Bra009379.1-P	Field mustard	nucleus	24.01	26.65
EES06041	Sorghum	nucleus	33.33	25.77
Os08t0562200-02	Rice	nucleus	33.33	25.61
Zm00001d049913_P001	Maize	plastid	32.14	25.39
HORVU7Hr1G060310.1	Barley	nucleus	32.54	25.39
TraesCS7B01G196900.1	Wheat	nucleus	32.34	25.35
TraesCS7D01G283800.1	Wheat	nucleus	32.34	25.23
OQU80699	Sorghum	plastid	33.53	25.22
Bra012024.1-P	Field mustard	cytosol, golgi, nucleus	17.26	25.22
Bra006619.1-P	Field mustard	cytosol	16.67	24.93
Zm00001d031898_P001	Maize	plastid	32.94	24.85
HORVU6Hr1G093050.4	Barley	cytosol, golgi, nucleus	31.35	24.65
TraesCS6D01G390200.1	Wheat	cytosol, nucleus, peroxisome	31.35	24.61
TraesCS6A01G406700.1	Wheat	cytosol, golgi, nucleus	31.35	24.53
GSMUA_Achr9P23580_001	Banana	plastid	28.77	24.45
GSMUA_Achr9P20400_001	Banana	nucleus, peroxisome, plastid	28.97	24.33
Bra032009.1-P	Field mustard	nucleus	23.02	24.27
Os02t0822400-01	Rice	nucleus	30.36	24.21
Zm00001d051879_P001	Maize	nucleus	31.55	24.2
Bra020182.1-P	Field mustard	cytosol	16.47	24.2
Bra002403.1-P	Field mustard	cytosol	15.48	24.07
Bra021471.1-P	Field mustard	cytosol, golgi, nucleus	16.07	23.96
Bra019599.1-P	Field mustard	nucleus	20.44	23.84
GSMUA_AchrUn_...	Banana	nucleus	22.42	23.64
Bra021366.1-P	Field mustard	nucleus	22.22	23.33
Bra006392.1-P	Field mustard	cytosol	22.62	23.27
TraesCSU01G135000.1	Wheat	nucleus	32.34	22.99
Bra012342.1-P	Field mustard	nucleus	23.02	22.79
Bra039745.1-P	Field mustard	nucleus	23.61	21.79
Bra017980.1-P	Field mustard	nucleus	19.84	21.6
GSMUA_Achr2P04010_001	Banana	plastid	27.18	21.37
Bra036520.1-P	Field mustard	nucleus	18.45	20.9
Bra009774.1-P	Field mustard	nucleus	18.85	20.88
Bra028039.1-P	Field mustard	nucleus	23.02	20.86
Bra036744.1-P	Field mustard	nucleus	22.42	20.66
Bra008567.1-P	Field mustard	nucleus	18.25	20.58
Bra034436.1-P	Field mustard	cytosol, nucleus, plastid	22.22	20.51
TraesCS6B01G451300.1	Wheat	nucleus	25.6	20.12
Bra034439.1-P	Field mustard	nucleus	22.22	19.38
Bra010193.1-P	Field mustard	nucleus	20.83	16.51

Protein Annotations

MapMan:15.5.17	Gene3D:3.30.310.150	EnsemblPlantsGene:Bra028790	EnsemblPlants:Bra028790.1	EnsemblPlants:Bra028790.1-P	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	InterPro:IPR003441	InterPro:IPR036093
UniProt:M4EJ25	InterPro:NAC-dom	InterPro:NAC_dom_sf	PFAM:PF02365	PFscan:PS51005	PANTHER:PTHR31989
PANTHER:PTHR31989:SF43	SUPFAM:SSF101941	TMHMM:TMhelix	UniParc:UPI00025430A2	SEG:seg	:

Description

AT5G04410 (E=1e-150) NAC2, anac078 | NAC2; transcription factor

Coordinates

chrA02:+:2044183..2046159

Molecular Weight (calculated)

56385.4 Da

IEP (calculated)

4.304

GRAVY (calculated)

-0.571

Length

504 amino acids

Sequence
(BLAST)

001: MGRGSATSLA PGFRFHPTDE ELVRYYLKRK VCNKPFNFDA ISVADVYKSE PWDLPDKSKL KGRDLEWYFF SMLDKKYSNG SKTNRATERG YWKTTGKDRE
101: IRNGTRVVGM KKTLVYHKGR APRGERSNWV MHEYRLTDDE LKIAGAPQDA FVLCRVFQKS GTGDKYGAPC LEEEWEEDTM TFAPEQEALS EGLGVDDDVY
201: LEKPESLVVY DAIPVQSNYC PGESSNNVES GNYEDCGNYV VDFEQPIEEE EEEEQKPIIR DGSIQPCSLF PGEQIGCGVE DEKAVNLEAS NDNVFVADTC
301: YGDIPTDDAS YMPEEPFIED DFNFEDYLNF FDDEDAQNWS LDVSQLLGSE EGLDQKPSPE ELEKEKESGE GSSSKQDADV TDLDSASKHP FLKKGSHMFA
401: PPSFASSQFQ TKEAAIRLHA AQSSGSVHVT AGMIRISNMT TLAAESSMGW SYDKNGNLNV VLSLGLVQSK TGGTTATRAM FIFMCFWILL LYVSFKIGTI
501: VSAL

Best Arabidopsis Sequence Match ( AT5G04410.1 )
(BLAST)

001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR

Arabidopsis Description

NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.