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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES06041 Sorghum nucleus 69.62 67.48
HORVU6Hr1G093050.4 Barley cytosol, golgi, nucleus 65.98 65.05
TraesCS6A01G406700.1 Wheat cytosol, golgi, nucleus 65.35 64.13
Zm00001d051879_P001 Maize nucleus 66.3 63.77
TraesCS6D01G390200.1 Wheat cytosol, nucleus, peroxisome 64.56 63.55
KRH34662 Soybean cytosol 9.02 62.64
TraesCS6B01G451300.1 Wheat nucleus 59.49 58.66
CDY70627 Canola cytosol 15.19 58.18
CDY41351 Canola plastid 14.56 55.09
PGSC0003DMT400060090 Potato nucleus 30.85 36.45
VIT_13s0019g05240.t01 Wine grape cytosol, nucleus, plastid 31.49 35.6
PGSC0003DMT400079791 Potato nucleus 22.47 35.5
Solyc05g055480.2.1 Tomato nucleus 21.36 34.97
Solyc05g055470.2.1 Tomato nucleus 30.06 34.93
Solyc11g008000.1.1 Tomato nucleus 29.11 34.85
PGSC0003DMT400060087 Potato nucleus 21.36 34.53
PGSC0003DMT400079789 Potato cytosol, nucleus, plastid 28.8 33.52
AT3G10500.1 Thale cress cytosol, nucleus, vacuole 28.48 32.79
Bra034118.1-P Field mustard nucleus 21.84 32.78
CDY41352 Canola nucleus 21.84 32.78
Bra034120.1-P Field mustard cytosol, nucleus, plastid 26.9 31.66
CDY58437 Canola cytosol, nucleus, plastid 27.69 31.47
CDY41354 Canola cytosol, nucleus, plastid 26.74 31.47
Os08t0562200-02 Rice nucleus 32.59 31.4
AT5G04410.1 Thale cress cytosol, nucleus, plastid 27.69 30.86
CDY00676 Canola nucleus 20.89 30.84
CDX70227 Canola cytosol, nucleus, vacuole 26.74 30.51
Bra009456.1-P Field mustard cytosol, nucleus, plastid 26.74 30.51
Bra001366.1-P Field mustard nucleus 20.25 30.4
Bra001365.1-P Field mustard nucleus 20.73 30.39
AT3G10490.2 Thale cress nucleus 21.68 30.38
CDY44853 Canola cytosol, nucleus, vacuole 26.9 30.36
Bra028790.1-P Field mustard cytosol, nucleus, plastid 24.21 30.36
VIT_13s0019g05230.t01 Wine grape nucleus 20.73 30.32
Solyc11g008010.1.1 Tomato endoplasmic reticulum, plasma membrane 22.31 30.32
CDY61762 Canola cytosol, nucleus, plastid 24.84 30.25
Bra034119.1-P Field mustard nucleus 21.04 30.23
CDY41353 Canola nucleus 21.04 30.16
Bra005804.1-P Field mustard cytosol, nucleus, vacuole 27.06 30.16
KRH34660 Soybean plastid 22.15 30.11
CDY14157 Canola cytosol, nucleus, vacuole 24.53 30.04
CDY11289 Canola cytosol, nucleus, vacuole 26.9 30.04
CDY00946 Canola nucleus 21.2 29.71
CDY08601 Canola nucleus, plastid 21.2 29.45
Bra029844.1-P Field mustard nucleus, plastid 21.2 29.45
KRG92124 Soybean nucleus 21.52 29.25
KRG92121 Soybean cytosol 27.85 29.14
GSMUA_Achr9P23580_001 Banana plastid 27.22 29.01
CDX73920 Canola nucleus 20.09 28.41
CDY00677 Canola nucleus 19.94 28.31
GSMUA_Achr2P04010_001 Banana plastid 28.64 28.24
CDX73921 Canola cytosol, nucleus, plastid 20.25 28.07
GSMUA_Achr9P20400_001 Banana nucleus, peroxisome, plastid 26.58 28.0
Os05t0426200-02 Rice nucleus 19.78 27.84
GSMUA_AchrUn_... Banana nucleus 20.57 27.2
Os09t0552800-00 Rice nucleus 15.35 26.5
CDY70628 Canola golgi 16.3 26.01
AT3G10480.3 Thale cress plastid 21.36 25.67
Os01t0261200-01 Rice cytosol 16.46 21.27
Os03t0119966-01 Rice nucleus 19.94 19.38
Os09t0493700-01 Rice nucleus 18.51 16.67
Os08t0157900-01 Rice nucleus, plasma membrane 18.04 15.64
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150EntrezGene:4331187EMBL:AK102173ProteinID:BAD22894.1ProteinID:BAD23126.1
ProteinID:BAF10473.1ProteinID:BAS81645.1ProteinID:EAZ25123.1GO:GO:0003674GO:GO:0003676GO:GO:0003677
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139
GO:GO:0006351GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987
GO:GO:0016020GO:GO:0016021InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sf
EnsemblPlantsGene:Os02g0822400EnsemblPlants:Os02t0822400-01PFAM:PF02365PFscan:PS51005PANTHER:PTHR31989PANTHER:PTHR31989:SF49
UniProt:Q6K6Z3SUPFAM:SSF101941TMHMM:TMhelixUniParc:UPI00003B0494RefSeq:XP_015624689.1SEG:seg
Description
NAC DOMAIN-CONTAINING PROTEIN 70No apical meristem (NAM) protein domain containing protein. (Os02t0822400-01);Similar to NAC-like protein. (Os02t0822400-02)
Coordinates
chr2:+:35303193..35307229
Molecular Weight (calculated)
69563.3 Da
IEP (calculated)
4.317
GRAVY (calculated)
-0.607
Length
632 amino acids
Sequence
(BLAST)
001: MSQSPPDSSS AAAVPLAPGF RFHPTDEELV SYYLRRRILG RRLRIDAIAE VDLYRLEPWD LPSLSRIRSR DAQWYFFARL DRKVTGAGAG GRGGPGNRTN
101: RATPRGYWKT TGKDRDVHHR GKLVGMKKTL VFHSGRAPKG QRTNWVMHEY RLLDADGTQD LHVVCRIFQK NGSGPQNGAQ YGAPYLEEDW EEEDDAIENM
201: PASGAFAEMA AVTDTADEST EEDGNFSLKT NDEPLQTQEY QPEITPVKAQ GSNEETNGGG YSCDVFSLDE ILQEPENVCK NEEQNAIDDK FTIAELSGYP
301: RQDDGYVGEN GPVNWIDPSN GDNTNWPLRA YSTQNHVNGT LSADGFFDTV NGTNSYSGPS DNQNLYLQDD GLTSSHQVGD NMPFYDASSN HKWVDGKDDY
401: LNLNDLLYPP AENQPLFDAG DDLMAYFDAT EDDFKFDIMG TEDSNSQLPD MSNFVQKDDN NNKFTLDGIS NTALYGASSS GSHGNMYPDT AVPDMPMDDT
501: VDKSFGKRLA SMLGSIPAPP AMASEFPPST GKSVVPLSAV NPSSSIRVTA GIIQLGGITF TGSTEHLQKN GDFNLLLSFT VEGDVSTKSI GFEPDTQMST
601: TPMVLRSGMY LFFVSAMILM LSYKVGLCIY SR
Best Arabidopsis Sequence Match ( AT5G04410.1 )
(BLAST)
001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR
Arabidopsis Description
NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.