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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 4
  • golgi 5
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:nucleus, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:nucleus
PProwler:secretory
TargetP:secretory
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41353 Canola nucleus 94.95 85.26
CDY41352 Canola nucleus 80.3 75.53
CDY00946 Canola nucleus 82.07 72.06
CDY08601 Canola nucleus, plastid 81.57 70.99
CDY00676 Canola nucleus 75.76 70.09
AT3G10490.2 Thale cress nucleus 78.79 69.18
CDX73921 Canola cytosol, nucleus, plastid 75.51 65.57
CDY00677 Canola nucleus 73.23 65.17
CDX73920 Canola nucleus 72.73 64.43
CDY41351 Canola plastid 25.51 60.48
AT3G10480.3 Thale cress plastid 75.51 56.84
CDY70627 Canola cytosol 19.44 46.67
KRG92124 Soybean nucleus 45.45 38.71
KRH34660 Soybean plastid 44.95 38.28
Solyc05g055480.2.1 Tomato nucleus 37.12 38.08
PGSC0003DMT400060087 Potato nucleus 37.12 37.6
PGSC0003DMT400079791 Potato nucleus 37.63 37.25
CDY71253 Canola cytosol 15.4 34.27
Solyc11g008010.1.1 Tomato endoplasmic reticulum, plasma membrane 37.37 31.83
VIT_13s0019g05230.t01 Wine grape nucleus 33.84 31.02
CDX92153 Canola nucleus 16.67 29.2
CDX95832 Canola nucleus 16.67 29.2
CDY46459 Canola nucleus 19.19 25.0
CDX67739 Canola nucleus 18.69 23.79
CDY10502 Canola nucleus 18.43 23.78
CDY42413 Canola nucleus 18.43 23.62
CDX77674 Canola nucleus 16.67 23.24
CDX81124 Canola nucleus 19.7 22.81
CDY63046 Canola nucleus 16.41 22.41
CDX90431 Canola nucleus 16.16 22.38
CDY44793 Canola nucleus 19.7 22.29
CDX84070 Canola nucleus 15.91 22.26
CDY44498 Canola nucleus 16.41 22.26
CDX87703 Canola nucleus 16.41 22.11
CDY59580 Canola nucleus 16.41 22.11
CDY01508 Canola nucleus 15.91 22.03
CDY66060 Canola nucleus 15.91 22.03
CDY67205 Canola nucleus 15.91 22.03
CDX78816 Canola nucleus 16.16 21.92
CDY43785 Canola nucleus 18.94 21.8
CDX84485 Canola nucleus 18.69 21.39
CDY41354 Canola cytosol, nucleus, plastid 28.54 21.04
CDY58437 Canola cytosol, nucleus, plastid 29.29 20.86
CDX70227 Canola cytosol, nucleus, vacuole 29.04 20.76
CDY44853 Canola cytosol, nucleus, vacuole 29.04 20.54
CDY14157 Canola cytosol, nucleus, vacuole 26.26 20.16
CDY11289 Canola cytosol, nucleus, vacuole 28.79 20.14
CDY61762 Canola cytosol, nucleus, plastid 26.26 20.04
CDX86970 Canola nucleus 15.91 19.94
CDY21575 Canola nucleus 20.2 18.43
CDY34716 Canola nucleus 13.64 18.37
CDX69911 Canola nucleus 20.2 18.26
CDX92368 Canola cytosol 14.9 17.61
CDY35676 Canola cytoskeleton, cytosol, nucleus 15.15 17.49
CDY20351 Canola cytosol, golgi, nucleus 14.9 17.4
CDY04487 Canola cytosol 15.15 17.39
CDY28745 Canola cytosol 20.96 17.36
CDY43143 Canola nucleus 20.96 17.36
GSMUA_AchrUn_... Banana nucleus 20.96 17.36
CDY21216 Canola nucleus 18.69 17.21
CDY09128 Canola cytosol 14.9 17.2
CDY34714 Canola cytosol, golgi, nucleus 14.65 17.16
CDX71459 Canola cytosol, golgi, nucleus 14.9 17.1
CDX70995 Canola cytosol 14.39 17.07
CDX78734 Canola cytosol 20.96 16.94
CDX88803 Canola cytosol 14.39 16.91
TraesCS6D01G390200.1 Wheat cytosol, nucleus, peroxisome 27.27 16.82
CDX78356 Canola nucleus 15.4 16.8
CDY25752 Canola nucleus 21.46 16.7
TraesCS6A01G406700.1 Wheat cytosol, golgi, nucleus 27.02 16.61
CDY16943 Canola nucleus 20.71 16.5
CDX70745 Canola cytosol 20.45 16.4
HORVU6Hr1G093050.4 Barley cytosol, golgi, nucleus 26.52 16.38
Os02t0822400-01 Rice nucleus 26.01 16.3
CDY49932 Canola nucleus 19.7 16.28
CDX73305 Canola nucleus 20.96 15.93
TraesCS7B01G196900.1 Wheat nucleus 25.76 15.86
Zm00001d049913_P001 Maize plastid 25.51 15.83
EES06041 Sorghum nucleus 26.01 15.8
TraesCS7D01G283800.1 Wheat nucleus 25.76 15.79
CDY00208 Canola nucleus 17.17 15.74
Os08t0562200-02 Rice nucleus 26.01 15.7
HORVU7Hr1G060310.1 Barley nucleus 25.51 15.63
CDX93723 Canola nucleus 21.72 15.47
Zm00001d031898_P001 Maize plastid 26.01 15.42
CDY12515 Canola plastid 21.21 15.41
CDY28401 Canola cytosol, nucleus, plastid 21.21 15.38
OQU80699 Sorghum plastid 26.01 15.37
CDY05939 Canola nucleus 17.93 15.33
GSMUA_Achr2P04010_001 Banana plastid 24.75 15.29
Zm00001d051879_P001 Maize nucleus 25.25 15.22
GSMUA_Achr9P23580_001 Banana plastid 22.47 15.01
CDX91785 Canola nucleus 20.2 14.84
GSMUA_Achr9P20400_001 Banana nucleus, peroxisome, plastid 22.47 14.83
CDY48632 Canola cytosol, nucleus, plastid 20.96 14.74
CDY08139 Canola nucleus 17.17 14.66
CDY28397 Canola nucleus 20.96 14.36
TraesCSU01G135000.1 Wheat nucleus 25.51 14.25
CDX73304 Canola nucleus 20.96 14.24
CDY19828 Canola nucleus 15.91 14.16
CDX88115 Canola cytosol 15.15 13.54
CDX80455 Canola nucleus 15.4 13.38
CDY60870 Canola nucleus 18.69 12.82
TraesCS6B01G451300.1 Wheat nucleus 20.2 12.48
CDY16427 Canola nucleus 18.69 12.44
CDY26922 Canola nucleus 19.7 12.26
CDY66161 Canola nucleus 19.44 12.13
CDX69392 Canola nucleus 10.1 9.35
CDX87118 Canola nucleus 15.91 7.57
CDX86969 Canola cytosol 1.52 5.61
Protein Annotations
MapMan:15.5.17Gene3D:3.30.310.150GO:A0A078JSN4UniProt:A0A078JSN4EnsemblPlants:CDY70628ProteinID:CDY70628
ProteinID:CDY70628.1ncoils:CoilGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005634GO:GO:0006139GO:GO:0006351
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00004863001InterPro:IPR003441InterPro:IPR036093InterPro:NAC-domInterPro:NAC_dom_sf
PFAM:PF02365PFscan:PS51005PANTHER:PTHR31989PANTHER:PTHR31989:SF29SUPFAM:SSF101941TMHMM:TMhelix
UniParc:UPI0004EE4243SEG:seg::::
Description
BnaAnng34430DBnaAnng34430D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JSN4]
Coordinates
chrLK042745:-:1478..3096
Molecular Weight (calculated)
45475.6 Da
IEP (calculated)
5.389
GRAVY (calculated)
-0.756
Length
396 amino acids
Sequence
(BLAST)
001: DIEFVFYLSE YLKFDFFFFY SAVLCVCFLV FSRLKTRDQE WYFYSALDKK YGNGARMNRA TNKGYWKATG KDREIRRDVQ ILGMKKTLVF HSGRAPDGLR
101: TNWVMHEYRL VDYETESNGN LVQDAYVLCR IFHKNNIGPP SGNRYAPFME EEWSDDRVAL IPGVDVRVRA EPLPLANGNN QMNQEIQPES KDLININEPP
201: RETTTQMDIE LNHQENNNSN RNDEIEEALK REETEEDERL PPPPPPVCVL NKEAPLPLLQ YKRRRQNEST RTTQDHSSST TTTVDNTPTL VSNSTAAAAT
301: NTAISALLEF SLMGISDKKE NPKPLHKEAS PPPAQLPSPE EKLNVLKKEV HQMSVERETF KLEMMSAEAM ISILQSRIDA LRQENDELKK NSANGH
Best Arabidopsis Sequence Match ( AT3G10490.4 )
(BLAST)
001: MNRATNRGYW KATGKDREIR RDILLLGMKK TLVFHSGRAP DGLRTNWVMH EYRLVEYETE KNGNLVQDAY VLCRVFHKNN IGPPSGNRYA PFMEEEWADD
101: EGALIPGIDV KLRLEPPPVA NGNDQMDQEI QSASKSLINI NEPPRETAPL DIESDQQNHH ENDLKPEEHN NNNNYDENEE TLKREQMEEE ERPPRPVCVL
201: NKEAPLPLLQ YKRRRQSESN NNSSRNTQDH CSSTTTTVDN TTTLISSSAA ATNTAISALL EFSLMGISDK KEKPQQPLRP HKEPLPPQTP LASPEEKVND
301: LQKEIHQMSV ERETFKLEMM SAEAMISILQ SRIDALRQEN EELKKNNANG Q
Arabidopsis Description
ANAC052NAC052 [Source:UniProtKB/TrEMBL;Acc:A0A178VCW1]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.