Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY16943 | Canola | nucleus | 80.37 | 69.22 |
| CDX70745 | Canola | cytosol | 64.25 | 55.67 |
| CDX78734 | Canola | cytosol | 60.75 | 53.06 |
| CDY21216 | Canola | nucleus | 42.76 | 42.56 |
| CDY43143 | Canola | nucleus | 45.56 | 40.8 |
| CDY28745 | Canola | cytosol | 45.09 | 40.38 |
| CDY49932 | Canola | nucleus | 45.09 | 40.29 |
| CDX92153 | Canola | nucleus | 10.28 | 19.47 |
| CDX95832 | Canola | nucleus | 10.28 | 19.47 |
| CDY60870 | Canola | nucleus | 22.66 | 16.81 |
| CDY10502 | Canola | nucleus | 11.92 | 16.61 |
| CDX67739 | Canola | nucleus | 11.92 | 16.4 |
| CDY70627 | Canola | cytosol | 6.31 | 16.36 |
| CDY16427 | Canola | nucleus | 22.2 | 15.97 |
| CDY42413 | Canola | nucleus | 11.45 | 15.86 |
| CDY01508 | Canola | nucleus | 9.58 | 14.34 |
| CDX90431 | Canola | nucleus | 9.35 | 13.99 |
| CDX84070 | Canola | nucleus | 9.11 | 13.78 |
| CDY41351 | Canola | plastid | 5.37 | 13.77 |
| CDX87703 | Canola | nucleus | 9.35 | 13.61 |
| CDY44793 | Canola | nucleus | 10.98 | 13.43 |
| CDY44498 | Canola | nucleus | 9.11 | 13.36 |
| CDX78816 | Canola | nucleus | 9.11 | 13.36 |
| CDY59580 | Canola | nucleus | 9.11 | 13.27 |
| CDY71253 | Canola | cytosol | 5.37 | 12.92 |
| CDX77674 | Canola | nucleus | 8.41 | 12.68 |
| CDY67205 | Canola | nucleus | 8.41 | 12.59 |
| CDY66060 | Canola | nucleus | 8.41 | 12.59 |
| CDY63046 | Canola | nucleus | 8.41 | 12.41 |
| CDX81124 | Canola | nucleus | 9.58 | 11.99 |
| CDY41352 | Canola | nucleus | 11.45 | 11.64 |
| CDY43785 | Canola | nucleus | 9.11 | 11.34 |
| CDX84485 | Canola | nucleus | 9.11 | 11.27 |
| CDY46459 | Canola | nucleus | 7.94 | 11.18 |
| CDY41353 | Canola | nucleus | 10.98 | 10.66 |
| CDY00946 | Canola | nucleus | 11.21 | 10.64 |
| CDY08601 | Canola | nucleus, plastid | 11.21 | 10.55 |
| CDX86970 | Canola | nucleus | 7.71 | 10.44 |
| CDY04487 | Canola | cytosol | 8.41 | 10.43 |
| CDX71459 | Canola | cytosol, golgi, nucleus | 8.41 | 10.43 |
| CDY21575 | Canola | nucleus | 10.51 | 10.37 |
| CDY00676 | Canola | nucleus | 10.28 | 10.28 |
| CDY70628 | Canola | golgi | 9.35 | 10.1 |
| CDX69911 | Canola | nucleus | 10.28 | 10.05 |
| CDX78356 | Canola | nucleus | 8.18 | 9.64 |
| CDY14157 | Canola | cytosol, nucleus, vacuole | 11.45 | 9.5 |
| CDX73920 | Canola | nucleus | 9.81 | 9.4 |
| CDX70227 | Canola | cytosol, nucleus, vacuole | 12.15 | 9.39 |
| CDY58437 | Canola | cytosol, nucleus, plastid | 12.15 | 9.35 |
| CDY44853 | Canola | cytosol, nucleus, vacuole | 12.15 | 9.29 |
| CDY00677 | Canola | nucleus | 9.58 | 9.21 |
| CDX73921 | Canola | cytosol, nucleus, plastid | 9.81 | 9.21 |
| CDX93723 | Canola | nucleus | 11.92 | 9.17 |
| CDY61762 | Canola | cytosol, nucleus, plastid | 10.98 | 9.06 |
| CDY11289 | Canola | cytosol, nucleus, vacuole | 11.92 | 9.01 |
| CDY28401 | Canola | cytosol, nucleus, plastid | 11.45 | 8.97 |
| CDY34714 | Canola | cytosol, golgi, nucleus | 7.01 | 8.88 |
| CDY25752 | Canola | nucleus | 10.51 | 8.84 |
| CDY08139 | Canola | nucleus | 9.58 | 8.84 |
| CDX88115 | Canola | cytosol | 9.11 | 8.8 |
| CDX80455 | Canola | nucleus | 9.35 | 8.77 |
| CDY19828 | Canola | nucleus | 9.11 | 8.76 |
| CDY41354 | Canola | cytosol, nucleus, plastid | 10.98 | 8.75 |
| CDY48632 | Canola | cytosol, nucleus, plastid | 11.45 | 8.7 |
| CDY00208 | Canola | nucleus | 8.64 | 8.56 |
| CDY20351 | Canola | cytosol, golgi, nucleus | 6.78 | 8.55 |
| CDX73305 | Canola | nucleus | 10.28 | 8.45 |
| CDY05939 | Canola | nucleus | 9.11 | 8.42 |
| CDX92368 | Canola | cytosol | 6.54 | 8.36 |
| CDX91785 | Canola | nucleus | 10.51 | 8.35 |
| CDY28397 | Canola | nucleus | 11.21 | 8.3 |
| CDY12515 | Canola | plastid | 10.51 | 8.26 |
| HORVU5Hr1G086730.1 | Barley | nucleus | 5.84 | 8.22 |
| CDY35676 | Canola | cytoskeleton, cytosol, nucleus | 6.54 | 8.16 |
| CDX70995 | Canola | cytosol | 6.31 | 8.08 |
| CDX73304 | Canola | nucleus | 10.98 | 8.06 |
| CDY09128 | Canola | cytosol | 6.31 | 7.87 |
| CDY34716 | Canola | nucleus | 5.37 | 7.82 |
| CDX88803 | Canola | cytosol | 5.84 | 7.42 |
| CDY66161 | Canola | nucleus | 9.58 | 6.46 |
| CDY26922 | Canola | nucleus | 9.58 | 6.45 |
| HORVU5Hr1G086780.2 | Barley | cytosol, nucleus | 2.57 | 4.95 |
| CDX87118 | Canola | nucleus | 9.11 | 4.69 |
| CDX86969 | Canola | cytosol | 0.93 | 3.74 |
| HORVU0Hr1G021100.1 | Barley | cytosol, plastid | 3.04 | 2.28 |
Protein Annotations
| Gene3D:3.30.310.150 | MapMan:35.1 | GO:A0A078BYH6 | EnsemblPlants:CDX69392 | ProteinID:CDX69392 | ProteinID:CDX69392.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00135357001 | InterPro:IPR036093 |
| InterPro:NAC_dom_sf | PANTHER:PTHR31989 | PANTHER:PTHR31989:SF6 | SUPFAM:SSF101941 | UniParc:UPI0004EEA891 | SEG:seg |
Description
BnaA10g17410D
Coordinates
chrLK031790:+:27887..30667
Molecular Weight (calculated)
48614.6 Da
IEP (calculated)
4.861
GRAVY (calculated)
-0.649
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MYVWIVLCGT PLIRDESECR HKLINYTNWQ GNHCFLAKIK NGTSSVHGTE STPMVQEQTE QQKAVTGKPP AKTGGTGWVM HEYRLDETEC EPTAFGMQDA
101: YALCRVFKKI IIEGKPRDQH QQHHQPYAHT SSNISRSSSF DVGSDLEISS NTHQVLPYNN VTETQPIFGN AFGDHDDRSQ YLSQNMAPSF SNYESPYGPY
201: LNQSKVYTET ECGMLQHQMS MPPLQVENTP VPTSIFSNGM NQNSGQCGFD DFTFATSNRN QLYNSNGDDH LIHIGNLEEQ LLKDVEVLPS FEENDQDIEY
301: FGGSGTSTLN NIEIDEFFSF EDRVEDTDKS NITLNSSGSG MVEEENIVDR KMLICTRQTT QVLYHQVVPS QVLKVRINLV GGNEDRRLFT EEEGKDSWFR
401: KAENVAKMKL KQISLVAKHY YQSFPIIF
101: YALCRVFKKI IIEGKPRDQH QQHHQPYAHT SSNISRSSSF DVGSDLEISS NTHQVLPYNN VTETQPIFGN AFGDHDDRSQ YLSQNMAPSF SNYESPYGPY
201: LNQSKVYTET ECGMLQHQMS MPPLQVENTP VPTSIFSNGM NQNSGQCGFD DFTFATSNRN QLYNSNGDDH LIHIGNLEEQ LLKDVEVLPS FEENDQDIEY
301: FGGSGTSTLN NIEIDEFFSF EDRVEDTDKS NITLNSSGSG MVEEENIVDR KMLICTRQTT QVLYHQVVPS QVLKVRINLV GGNEDRRLFT EEEGKDSWFR
401: KAENVAKMKL KQISLVAKHY YQSFPIIF
001: MAPVSLPPGF RFHPTDEELI TYYLKRKING LEIELEVIAE VDLYKCEPWD LPGKSLLPSK DQEWYFFSPR DRKYPNGSRT NRATKGGYWK ATGKDRRVSW
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NCSSSFDTCS DLEISSTTHQ
201: VQNTFQPRFG NERFNSNAIS NEDWSQYYGS SYRPFPTPYK VNTEIECSML QHNIYLPPLR VENSAFSDSD FFTSMTHNND HGVFDDFTFA ASNSNHNNSV
301: GDQVIHVGNY DEQLITSNRH MNQTGYIKEQ KIRSSLDNTD EDPGFHGNNT NDNIDIDDFL SFDIYNEDNV NQIEDNEDVN TNETLDSSGF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP CHTLKVHVNP ISHNVEERTL FIEEDKDSWL QRAEKITKTK LTLFSLMAQQ YYKCLAIFF
101: RDRAIGTKKT LVYYRGRAPH GIRTGWVMHE YRLDETECEP SAYGMQDAYA LCRVFKKIVI EAKPRDQHRS YVHAMSNVSG NCSSSFDTCS DLEISSTTHQ
201: VQNTFQPRFG NERFNSNAIS NEDWSQYYGS SYRPFPTPYK VNTEIECSML QHNIYLPPLR VENSAFSDSD FFTSMTHNND HGVFDDFTFA ASNSNHNNSV
301: GDQVIHVGNY DEQLITSNRH MNQTGYIKEQ KIRSSLDNTD EDPGFHGNNT NDNIDIDDFL SFDIYNEDNV NQIEDNEDVN TNETLDSSGF EVVEEETRFN
401: NQMLISTYQT TKILYHQVVP CHTLKVHVNP ISHNVEERTL FIEEDKDSWL QRAEKITKTK LTLFSLMAQQ YYKCLAIFF
Arabidopsis Description
NAC045NAC045 [Source:UniProtKB/TrEMBL;Acc:A0A178VIZ2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.