Factsheet for HORVU5Hr1G086730.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G086780.2	Barley	cytosol, nucleus	73.03	100.0
HORVU1Hr1G065570.2	Barley	nucleus	98.36	69.37
HORVU7Hr1G033990.1	Barley	nucleus	64.47	56.0
HORVU2Hr1G045580.1	Barley	nucleus	64.47	56.0
HORVU0Hr1G000630.1	Barley	nucleus	44.08	50.38
HORVU2Hr1G127550.1	Barley	nucleus	18.75	14.18
HORVU2Hr1G127510.1	Barley	nucleus	18.75	14.18
HORVU6Hr1G093050.4	Barley	cytosol, golgi, nucleus	15.79	7.49
HORVU7Hr1G060310.1	Barley	nucleus	15.79	7.43
HORVU3Hr1G036380.1	Barley	cytosol	9.54	6.02
CDX69392	Canola	nucleus	8.22	5.84
HORVU4Hr1G085320.1	Barley	cytosol, nucleus, peroxisome	12.17	5.37
HORVU1Hr1G049840.3	Barley	cytosol	6.25	5.32
HORVU5Hr1G087850.4	Barley	nucleus	4.28	5.28
CDX86970	Canola	nucleus	5.26	5.06
HORVU5Hr1G087840.5	Barley	nucleus, plastid	5.26	4.82
HORVU5Hr1G074230.30	Barley	nucleus, plastid	10.2	4.09
HORVU7Hr1G070780.5	Barley	nucleus	7.24	3.12
HORVU0Hr1G021100.1	Barley	cytosol, plastid	4.28	2.28
CDX86969	Canola	cytosol	0.66	1.87

Protein Annotations

EnsemblPlants:HORVU5Hr1G086730.1	EnsemblPlantsGene:HORVU5Hr1G086730	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR003441	InterPro:NAC-dom	PANTHER:PTHR31989	PANTHER:PTHR31989:SF61	PFscan:PS51005	UniParc:UPI000B473451
UniProt:A0A287S4L1	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chrchr5H:+:577178981..577180277

Molecular Weight (calculated)

33168.6 Da

IEP (calculated)

3.502

GRAVY (calculated)

-0.502

Length

304 amino acids

Sequence
(BLAST)

001: MYEYKMEDET LDAAGFSKDA YVLCKIFKKS GLGPRIGEQY GAPFDENEWK NLDVGSSIFS FAPSSGVEDP QVESSALATP VIQEPFTPQQ SVQFSEHVNI
101: CSNEDNNAPP EIDGIWLEEL AMFLNDSPNH DIALPENSGL PPMSELEAQA FEMNTAELYD QLAGLAQSGD MSNVNFPAGD VGVTENDFQQ SNSGFAMDDD
201: YIELDDLFAP GETFSYDFSG ETFSYDLTGG TFSYDLSVPN NQFLQYPLDQ STNGSHYGDG ATQSTFEASG SLPPMPSTFD DMPSVSNKPA NSNCLNPTMK
301: DPFS

Best Arabidopsis Sequence Match ( AT5G04410.1 )
(BLAST)

001: MGRGSVTSLA PGFRFHPTDE ELVRYYLKRK VCNKPFKFDA ISVTDIYKSE PWDLPDKSKL KSRDLEWYFF SMLDKKYSNG SKTNRATEKG YWKTTGKDRE
101: IRNGSRVVGM KKTLVYHKGR APRGERTNWV MHEYRLSDED LKKAGVPQEA YVLCRIFQKS GTGPKNGEQY GAPYLEEEWE EDGMTYVPAQ DAFSEGLALN
201: DDVYVDIDDI DEKPENLVVY DAVPILPNYC HGESSNNVES GNYSDSGNYI QPGNNVVDSG GYFEQPIETF EEDRKPIIRE GSIQPCSLFP EEQIGCGVQD
301: ENVVNLESSN NNVFVADTCY SDIPIDHNYL PDEPFMDPNN NLPLNDGLYL ETNDLSCAQQ DDFNFEDYLS FFDDEGLTFD DSLLMGPEDF LPNQEALDQK
401: PAPKELEKEV AGGKEAVEEK ESGEGSSSKQ DTDFKDFDSA PKYPFLKKTS HMLGAIPTPS SFASQFQTKD AMRLHAAQSS GSVHVTAGMM RISNMTLAAD
501: SGMGWSYDKN GNLNVVLSFG VVQQDDAMTA SGSKTGITAT RAMLVFMCLW VLLLSVSFKI VTMVSAR

Arabidopsis Description

NAC078NAC domain-containing protein 78 [Source:UniProtKB/Swiss-Prot;Acc:Q84K00]
SUBAcon: [plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.